Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P18
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 109 1e-24
02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595... 105 3e-23
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259... 104 5e-23
01_01_1191 + 9487835-9488467,9492584-9492787 35 0.050
05_06_0158 - 26054487-26054672,26054770-26055018,26056003-260566... 30 1.1
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 29 1.9
11_06_0550 + 24879074-24881290 28 4.3
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 28 4.3
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 28 5.7
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 28 5.7
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 27 7.5
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 27 7.5
03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447 27 7.5
03_02_0832 - 11623018-11623743 27 7.5
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324... 27 7.5
12_01_0318 - 2425178-2425267,2425830-2426008,2426594-2426654,242... 27 10.0
11_06_0377 - 22900042-22900452,22900527-22902236 27 10.0
10_08_0377 + 17343244-17343372,17344316-17344393,17344496-173445... 27 10.0
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 27 10.0
07_03_1612 - 28140155-28140781,28140913-28141182 27 10.0
06_01_1182 + 10150911-10150979,10150984-10151457 27 10.0
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 27 10.0
06_01_0717 - 5219848-5220178,5220268-5220617,5221807-5221982,522... 27 10.0
04_04_0235 + 23819060-23819114,23819486-23819542,23819707-238198... 27 10.0
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 109 bits (263), Expect = 1e-24
Identities = 52/128 (40%), Positives = 78/128 (60%)
Frame = +3
Query: 168 GKTFIVQGFGNVGLHTCRYLVRAGATCIGIIEHDGSIYNHDGIDPKALEDYRIENGTVVG 347
G TF++QGFGNVG R + G I + + GSI N +G+D AL +R E G +
Sbjct: 206 GSTFVIQGFGNVGSWAARIIHEKGGKVIALGDVTGSIRNKNGLDIPALMKHRNEGGALKD 265
Query: 348 FPGAKPYEGENMLYEKCDILVPAAVEQVIHKENAHRIQAKIIAEAANGPTTPAADKILID 527
F A+ + +L +CD+L+P A+ V+++ENA ++AK I EAAN PT P AD+IL
Sbjct: 266 FHDAEVMDSSELLVHECDVLIPCALGGVLNRENAPDVKAKFIIEAANHPTDPEADEILAK 325
Query: 528 RKILVIPD 551
+ + ++PD
Sbjct: 326 KGVTILPD 333
>02_05_0144 +
26258841-26258948,26259099-26259212,26259335-26259556,
26259660-26259734,26259827-26259943,26260046-26260296,
26260833-26260908,26261045-26261131,26261216-26261401
Length = 411
Score = 105 bits (251), Expect = 3e-23
Identities = 49/128 (38%), Positives = 78/128 (60%)
Frame = +3
Query: 168 GKTFIVQGFGNVGLHTCRYLVRAGATCIGIIEHDGSIYNHDGIDPKALEDYRIENGTVVG 347
G TF++QG GNVG + + + G + + + G+I N GID AL +R E G++
Sbjct: 206 GSTFVIQGLGNVGSWAAKLIHQKGGKIVAVGDVTGAIRNKSGIDIPALLKHRSEGGSLED 265
Query: 348 FPGAKPYEGENMLYEKCDILVPAAVEQVIHKENAHRIQAKIIAEAANGPTTPAADKILID 527
F GA+ + +L +CD+LVP A+ V+++ENA ++A+ I E AN PT AD+IL
Sbjct: 266 FYGAEVMDAAELLVHECDVLVPCALGGVLNRENAAEVKARFIIEGANHPTDTEADEILAK 325
Query: 528 RKILVIPD 551
+ ++V+PD
Sbjct: 326 KGVIVLPD 333
>03_06_0282 -
32824950-32825135,32825247-32825505,32825651-32825901,
32826309-32826425,32826613-32826687,32826788-32827009,
32827396-32827509,32827694-32827801
Length = 443
Score = 104 bits (249), Expect = 5e-23
Identities = 50/119 (42%), Positives = 74/119 (62%)
Frame = +3
Query: 159 GWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGIIEHDGSIYNHDGIDPKALEDYRIENGT 338
G G+ F++QGFGNVG + + AG I I + G++ N +G+D L + EN
Sbjct: 203 GIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTGAVKNSNGLDIAKLMKHSSENRG 262
Query: 339 VVGFPGAKPYEGENMLYEKCDILVPAAVEQVIHKENAHRIQAKIIAEAANGPTTPAADK 515
+ GF G + ++L E+CD+L+PAA+ VI+K+NA+ I+AK I EAAN PT P AD+
Sbjct: 263 IKGFDGGDAIDPRSLLTEECDVLIPAALGGVINKDNANEIKAKYIIEAANHPTDPEADE 321
>01_01_1191 + 9487835-9488467,9492584-9492787
Length = 278
Score = 34.7 bits (76), Expect = 0.050
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 96 VHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGII--EHD 269
V G+E F + + + + G+ GK+ +V G GN G+ L GA +I E D
Sbjct: 154 VPGMETFPGKVVHAADYRSAEGFKGKSVLVVGGGNSGMEIAYDLAVGGAATSIVIRSESD 213
Query: 270 GSIYNHDGIDPKALED-YRIENG 335
+ DG+ ++ D ++ ENG
Sbjct: 214 DGLIGDDGMAGRSYPDHWKGENG 236
>05_06_0158 -
26054487-26054672,26054770-26055018,26056003-26056611,
26056970-26056972
Length = 348
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 96 VHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTC 218
+ GLE F + S + + GKT +V G GN G+ C
Sbjct: 151 IDGLEEFRGSVIHTSAYKSGSKFAGKTVLVVGCGNSGMEVC 191
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 219 RYLVRAGATCIGIIEHDGSIYNHDGIDPKALEDYRIENGTVVGFPGAK 362
R LV AGA +G DG +G+ +ALE++ ++ TVV P ++
Sbjct: 664 RVLVAAGAAEVGTHRSDGQRLRCEGLTEEALEEF-LDGVTVVRGPQSR 710
>11_06_0550 + 24879074-24881290
Length = 738
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 338 SPILDSIVLKSLGVNTIMVVDGAVVLYDTDASGS-GPDQVPAGVQTHVTETLNDERLP 168
+P+L+ I+ +N++ +D L + + G PDQV + TH + + +LP
Sbjct: 646 APMLEKIIWSFTKMNSLSGIDNLSKLKELEFIGDLVPDQVKIDINTHRKHPVLNHKLP 703
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +3
Query: 291 GIDPKALEDYRIENG--TVVGFPG--AKPYEGENMLYEKCDILVPAAVEQVIHKENAHRI 458
G DP A + YRIENG +VG PG N+ K D+ V V+ ++ E R
Sbjct: 293 GGDPLAQQIYRIENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLL--ERGFRD 350
Query: 459 QAKIIAEAANGP 494
Q I +A + P
Sbjct: 351 QVMQIFQALSHP 362
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 168 GKTFIVQGFGNVGLHTCRYLVRAGATCIGIIEHD 269
GKT + GFG VG R RA + II HD
Sbjct: 210 GKTLAIMGFGKVGSEVAR---RAKGLGMDIISHD 240
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 417 PRARVCHISRTACSHPRRASHRGILRQSHSRFYSPQEPWGQYHHGCRWSRR 265
PRA + H+ TACS A HR ++ +S + P H R R
Sbjct: 96 PRAPL-HLKTTACSDANGAHHRTVVDRSSPKLADRHSPRSPLHEKKRAGTR 145
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 378 SHPRRASHRGILRQSHSRFYSPQEP 304
+HP A + G ++ H Y PQEP
Sbjct: 415 NHPELADYNGGVQAQHEHQYHPQEP 439
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 22 TRLRNGQTDYQGGIHGRVSATGRGVSTAWKTL 117
TRLR G+ G GR+ A GRG + W +
Sbjct: 224 TRLRRGEEAVGDG-EGRIVAVGRGSAEGWSLM 254
>03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447
Length = 309
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 284 VVDGAVVLYDTDASGSGPDQVPAGVQTHVTETLNDERLPAPTGS 153
++D +V ++ + + G +P G + V+ T D R PAP G+
Sbjct: 152 ILDHSVQIFASAVTPVGAGLIPTGAVSPVSGTPFDFRAPAPPGA 195
>03_02_0832 - 11623018-11623743
Length = 241
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 QRCVHGLENFINEANYMSMIGTTPGWGGKTFIVQGFGNVGLHTCRYLVRAGATCIGI--- 257
+R V GLE+ + E + + PG G+T + G +G R + +G TC G+
Sbjct: 109 RRYVEGLESAMIEVAALYGVQACPGAAGETGVWVGDRKIGAIGVR--ISSGFTCHGLAFN 166
Query: 258 IEHDGSIYNH 287
I+ D + H
Sbjct: 167 IDPDLGFFEH 176
>01_01_0426 +
3234987-3235935,3236744-3236782,3237044-3237409,
3240871-3242315
Length = 932
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 423 QRPRARVCHISRTACSHPRR 364
++PR R+ +S ACSH RR
Sbjct: 332 EKPRRRLLRLSAAACSHGRR 351
>12_01_0318 -
2425178-2425267,2425830-2426008,2426594-2426654,
2426851-2427160,2428514-2428777,2432595-2433865
Length = 724
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -1
Query: 257 DTDASGSGPDQVPAGVQTHVTETLNDERLPAPTG--SSTNHAHVIG 126
DTD ++ P GV T T N A S+NH + +G
Sbjct: 86 DTDDDDDDEEEEPLGVDASTTTTTNSTTTTATAARRRSSNHTYTLG 131
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 407 RARGR*TSYTQGKCTQDSG*DNRRGRQRAD 496
R R R T+G C +D G + RRGR D
Sbjct: 249 RGRARYGVETRGFCAEDVGDEGRRGRAHDD 278
>10_08_0377 +
17343244-17343372,17344316-17344393,17344496-17344558,
17344836-17344883,17345203-17345349,17346264-17346395,
17346905-17346945,17347605-17347633,17348969-17349096,
17349919-17349994,17350111-17350231,17350300-17350399,
17350491-17350572,17350664-17350746,17351978-17352088,
17352260-17352311,17352363-17352408,17352652-17352860,
17353128-17353251,17353667-17353741,17353837-17353891,
17354476-17354595,17354670-17354762,17354869-17355014,
17355152-17355329,17356876-17357110,17357824-17357912
Length = 929
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 281 VDGAVVLYDTDASGSGPDQVPAGVQTHVTETLNDERLPAPTGSSTN 144
+DG +Y SG G +V + H+ E L++ +LP + N
Sbjct: 568 LDGLFQIYQIALSGVGGYKVSSEDSLHLVEALSNVKLPQVVADAVN 613
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 168 GKTFIVQGFGNVGLHTCRYLVRAGATCIGIIEHD 269
GKT V GFG VG R RA + +I HD
Sbjct: 228 GKTLAVMGFGKVGSEVAR---RAKGLGMHVIAHD 258
>07_03_1612 - 28140155-28140781,28140913-28141182
Length = 298
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 173 LPAPTGSSTNHAHVIGLVDKVFQAVDTP 90
L P G TNH V +VD+ F+ + +P
Sbjct: 135 LQHPEGRLTNHMAVFNMVDETFKQMTSP 162
>06_01_1182 + 10150911-10150979,10150984-10151457
Length = 180
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 291 GIDPKALEDYRIENGTVVGFPGAKPYEG 374
G+D +A+E + NG VG G+KP EG
Sbjct: 23 GVDTEAVEA-EVHNGGRVGVRGSKPREG 49
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 168 GKTFIVQGFGNVGLHTCRYLVRAGATCIGIIEHDGSIYNHDGIDPKALEDYRIENGTVVG 347
G +V G G VG H L+R+G + +++ D + +L + + VG
Sbjct: 95 GSFVVVIGLGGVGSHAASMLLRSGVGRLLLVD-------FDQVSLSSLNRHAVATRDDVG 147
Query: 348 FPGAKPYEGE-NMLYEKCDI 404
P A + +M+Y +C I
Sbjct: 148 TPKALCLKKHFSMIYPECQI 167
>06_01_0717 -
5219848-5220178,5220268-5220617,5221807-5221982,
5222065-5222302,5224492-5224657,5224792-5225159,
5225261-5225436,5227742-5227976,5228242-5228493,
5228513-5228848
Length = 875
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +3
Query: 171 KTFIV--QGFGNVGLHTCRYLVRAGA 242
KT +V + +G G+H C YL RA A
Sbjct: 5 KTLLVKQENYGTNGIHACTYLKRASA 30
>04_04_0235 +
23819060-23819114,23819486-23819542,23819707-23819808,
23820162-23820238,23820347-23820470,23820730-23820794,
23821827-23821896,23822395-23822470,23822597-23822687,
23822767-23822889
Length = 279
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 107 GKLYQRGQLHEHDWYYSRLG 166
G L+ GQLHE +W+ R G
Sbjct: 42 GYLFIDGQLHEFNWFKERFG 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,650,116
Number of Sequences: 37544
Number of extensions: 407876
Number of successful extensions: 1157
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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