Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P17
         (369 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    22   1.7  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    22   1.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   2.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   9.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   9.2  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -3

Query: 334 KRWQEEHKFDWVYVMSDDH 278
           ++W  EH   W+ +++  H
Sbjct: 37  RQWTREHVAQWINLVTQQH 55


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -3

Query: 334 KRWQEEHKFDWVYVMSDDH 278
           ++W  EH   W+ +++  H
Sbjct: 37  RQWTREHVAQWINLVTQQH 55


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 364 DTVRDSHLTAKRWQEEHK 311
           +  R+S  T K W  EHK
Sbjct: 90  NATRESTATLKAWLNEHK 107


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/18 (38%), Positives = 9/18 (50%), Gaps = 1/18 (5%)
 Frame = +1

Query: 205 EKAKHPTRWNQHCY-QAC 255
           +K  HP +W   C  Q C
Sbjct: 48  QKKSHPPQWTWQCINQRC 65


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 355 RDSHLTAKRWQEEHKFDW 302
           +D H  A R    H F+W
Sbjct: 19  KDPHFAADRNSIVHLFEW 36


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 355 RDSHLTAKRWQEEHKFDW 302
           +D H  A R    H F+W
Sbjct: 19  KDPHFAADRNSIVHLFEW 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,320
Number of Sequences: 336
Number of extensions: 1346
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)