Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P17
         (369 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   158   7e-41
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   1.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   4.8  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  158 bits (383), Expect = 7e-41
 Identities = 72/118 (61%), Positives = 87/118 (73%)
 Frame = +2

Query: 14  KAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXD 193
           +A+LQ+RLK+PPPINQFTQTLDK TA+ + K  +KYRPE                    +
Sbjct: 73  RAILQKRLKIPPPINQFTQTLDKPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKE 132

Query: 194 EPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIV 367
           EPP KR N LR G N+V K+VE+KKAQLV+IAHDVDPIELV++LPALCRKMGVPYCI+
Sbjct: 133 EPPSKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCII 190


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +2

Query: 29  RRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 130
           R+L++     + T+T+++  A+ +   L ++RPE
Sbjct: 229 RKLRLKVCSRELTETVERVAAEAINSKLHEHRPE 262


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 45  RRQSTSSPRH*IKPQPKVCSRSWRNTGQKLRQS 143
           RR    SP H  KP+ +   R W+  GQ L +S
Sbjct: 229 RRFHRQSPAHRRKPRWRRAGRRWK-VGQFLPES 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,335
Number of Sequences: 2352
Number of extensions: 5492
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)