Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P16
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.85 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.0  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   7.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -3

Query: 295 TTKICFQAGCEIKCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDR 116
           T K+C QA   +K    +  + S    H+M  ++   G  R          REK ++   
Sbjct: 549 TCKVCDQAFSSLKELSNHMVKNSHYKEHIMRSITESGGRRRQ--------TREKRKKSLP 600

Query: 115 RRAVNGGG*CEHLFRGENTSSVLDRAR 35
            R +      +H F+  ++SS+LD+ R
Sbjct: 601 VRKLLELERAQHEFKNGDSSSLLDKMR 627


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 190 GTGGGRSGDMALSSGMREKVE 128
           G GGGR GD     G  +K E
Sbjct: 94  GRGGGRDGDRGDGGGEEKKRE 114


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 322 DAAIQRVGSTTKICFQAGCE 263
           DAA+++V    K+C    CE
Sbjct: 143 DAALRKVVPLKKLCNNGTCE 162


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 6   RPACAPEYSRLARSNTELVFSPRKRCSHQPPPFT 107
           R AC P+   L R   + + S   +CS +    T
Sbjct: 48  RGACTPDADELKRVLPDALKSDCAKCSEKQKEMT 81


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 399 GYNKPRTVLISG 434
           G NKP T+L++G
Sbjct: 239 GDNKPDTILVNG 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,403
Number of Sequences: 336
Number of extensions: 2174
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)