Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P16
(489 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0907 - 7636725-7637681 31 0.50
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.50
07_03_0820 - 21749477-21749866,21751192-21751590 30 0.87
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240... 30 1.1
12_02_0287 - 16851369-16851998 29 1.5
06_03_0790 - 24636805-24637770 29 1.5
03_03_0188 + 15269347-15270213 29 1.5
05_03_0676 - 16853937-16854042,16854605-16854700,16854920-168550... 29 2.0
02_02_0349 + 9237537-9238334 29 2.0
12_02_0286 - 16845594-16846223 29 2.6
10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 29 2.6
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295... 28 3.5
01_06_1293 - 36050847-36051304,36052343-36052826 28 3.5
07_03_0213 - 15244299-15246311 28 4.6
07_01_1004 + 8500584-8501881,8502194-8502402,8503024-8503266,850... 28 4.6
04_03_0665 - 18506221-18506271,18506331-18506401,18507097-185071... 28 4.6
01_07_0373 + 43136075-43136134,43136223-43136338,43136437-431365... 28 4.6
11_01_0486 - 3738887-3738986,3739557-3740826,3741894-3741966 27 6.1
09_02_0556 + 10637362-10637575,10637728-10637825 27 6.1
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 27 6.1
04_01_0593 - 7817047-7817088,7817319-7817358,7817678-7817820 27 6.1
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 27 6.1
01_05_0490 + 22672241-22674679 27 6.1
12_02_0481 - 19536201-19536459,19536647-19536687 27 8.1
07_03_1790 - 29536497-29536625,29536734-29536848,29537357-295375... 27 8.1
07_01_0862 - 7172083-7172931 27 8.1
05_03_0036 + 7605138-7605445,7605718-7605805,7606355-7606408,760... 27 8.1
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 27 8.1
01_06_0695 - 31292622-31293317 27 8.1
>07_01_0907 - 7636725-7637681
Length = 318
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 469 FLARCRACTELPPLIRTVRGLLYPFKLIA 383
FLAR A PPL+ T G+ YPF +A
Sbjct: 187 FLARSNAAVHPPPLMSTAAGVSYPFGDVA 215
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.1 bits (67), Expect = 0.50
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +3
Query: 3 TRPACAPEYSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPP 182
+ P+ PE S AR L S C HQPPP A + S+ P A +P R
Sbjct: 610 SEPSPTPEASN-ARGGEMLSSSTSTHCLHQPPPPPASHQFRSAAAFRRPPSPAAAPLRAR 668
Query: 183 P 185
P
Sbjct: 669 P 669
>07_03_0820 - 21749477-21749866,21751192-21751590
Length = 262
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 99 PFTALRRSFSSTFSLIPEERAISPERPPPVP 191
P ++ S SST SL+P A+ P PPP P
Sbjct: 23 PLSSPSSSSSSTHSLLPRPPALWPPPPPPPP 53
>07_03_1764 +
29322683-29323387,29323809-29323889,29323968-29324072,
29324453-29325382,29326728-29326856,29326953-29327042,
29327237-29327293,29327362-29327394
Length = 709
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = -3
Query: 247 ANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG*CEHLFRG 68
A GRR PH G GG SG L G ++ +DR GGG +H G
Sbjct: 30 AEGGRRGSCSPHPQDRYGSGRRGGGSGRGGLVDG--DRSHPRDR----TGGG--DHYGAG 81
Query: 67 ENTSSVLDR 41
E + +DR
Sbjct: 82 EGSGPRMDR 90
Score = 27.5 bits (58), Expect = 6.1
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -3
Query: 247 ANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG 92
A GRR PH G GG SG L G ++ DR A GGG
Sbjct: 92 AEGGRRGSCSPHPQDRYGSGRRGGGSGRGGLVDG--DRSGGGDRYGAGGGGG 141
>12_02_0287 - 16851369-16851998
Length = 209
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = -3
Query: 259 KCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG*CEH 80
K + RG R +RG V + GGGR GD G + + A +GG
Sbjct: 21 KGRRRRRGWRGRRGDGVPAKPRSSRGGGRCGDAEGGDGDVGRRSGEAAGMAGDGGVVATP 80
Query: 79 LFRGENTSSVL 47
L GE+ S V+
Sbjct: 81 LVVGEDASPVI 91
>06_03_0790 - 24636805-24637770
Length = 321
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 250 KANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVE-EKDRRRAVNGGG 92
+ +GR RG + S + RG G ++GD ++SG R K++ R V GGG
Sbjct: 169 RGGKGRGRGRGRGMGSGIGRGNG--QNGDRGINSGGRGKIKGSNGGSRNVIGGG 220
>03_03_0188 + 15269347-15270213
Length = 288
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 60 VFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVP 191
+F P S+ PF L + SS+ + + +A P PPP P
Sbjct: 39 LFLPSSSSSYLDSPFHGLLHTSSSSSATMSPSQAPPPHPPPPAP 82
>05_03_0676 -
16853937-16854042,16854605-16854700,16854920-16855089,
16856742-16856825,16857042-16857119,16858053-16858216,
16858345-16858429
Length = 260
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 285 ILVVLPTLWIAASLFIFWKCVQCPLSV-VKTIG 380
I VVL W+AA L FW C C V V IG
Sbjct: 120 IFVVLCKYWVAAKLDSFWVCPICATRVGVDLIG 152
>02_02_0349 + 9237537-9238334
Length = 265
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 223 RGPHVMSCMSRGTGGGRSGDMALSSGMREK 134
RG + +RG+GG R+G AL+ G +EK
Sbjct: 31 RGGQIWGEPARGSGGLRTGGAALAEGRKEK 60
>12_02_0286 - 16845594-16846223
Length = 209
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = -3
Query: 259 KCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG*CEH 80
K + RG R +RG V + GGGR GD G + + A +GG
Sbjct: 21 KGRRRRRGWRGRRGDGVPAKPRSSRGGGRCGDAEGGDGDVGRRSGEAVGMAGDGGVVATP 80
Query: 79 LFRGENTSSVL 47
L GE+ S V+
Sbjct: 81 LVVGEDASPVI 91
>10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223
Length = 254
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 15 CAPEYSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPR 194
C+P + A + T + RKR H A+ + S S P +R+ +P PPP P
Sbjct: 178 CSPHAATAAATATATA-ARRKRLRHAH----AMASTSDSDNSTSPAKRSFTPSTPPPPPT 232
Query: 195 L 197
L
Sbjct: 233 L 233
>08_02_0986 +
23328056-23328145,23328289-23329227,23329313-23329570,
23330384-23330692
Length = 531
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -3
Query: 250 KANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRR 110
KA R + P C G G SG++ +SG+ + +EK R
Sbjct: 470 KARRRNDTMFAPVTDQCAQGGESGATSGEVTEASGVGGRAQEKGEER 516
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 90 QPPPFTALRRSFSSTFSLIPEERAISPERPPP 185
+PPP L R + F L A+ P PPP
Sbjct: 118 RPPPLPVLHRPLARPFPLAMAPTAMPPPPPPP 149
>07_03_0213 - 15244299-15246311
Length = 670
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 175 RSGDMALSSGMREKVEEK-DRRRAVNGGG*CEHLFRGENTSSVLDRARRLYS 23
R G + S +REK E DRR+ + + F +N VLDRARR+ S
Sbjct: 542 RKGRHEVLSWLREKGESGCDRRKVIEEIRNEDSSFFADNYYPVLDRARRVSS 593
>07_01_1004 +
8500584-8501881,8502194-8502402,8503024-8503266,
8503381-8503697,8503891-8504250
Length = 808
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 208 MSCMSRGTGGGRSGDMALSSGM 143
++CM+ G GGG G++A GM
Sbjct: 200 LACMNNGVGGGIPGELAALRGM 221
>04_03_0665 -
18506221-18506271,18506331-18506401,18507097-18507169,
18507476-18507805
Length = 174
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = -3
Query: 295 TTKICFQAGCEIKCSKANRGRRSKRGPHVMS---------CMSRGTGGG--RSGDMALSS 149
T + C+ C ++ SKA R +G H+ + C+SRG GG R + LSS
Sbjct: 59 TRRSCWWMWCGLRRSKAGRRGAPVQGSHMSAEVEGWWEHWCISRGFAGGEQRQQSVTLSS 118
Query: 148 G 146
G
Sbjct: 119 G 119
>01_07_0373 +
43136075-43136134,43136223-43136338,43136437-43136500,
43136602-43136712,43136996-43137103,43137202-43137271,
43138019-43138086,43138225-43138260,43138455-43138538,
43138870-43139000,43139123-43139147
Length = 290
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 271 GCEIKCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMRE 137
G + CS R RSK G H+ S +S GT + S ++E
Sbjct: 25 GGDCDCSVFLRWLRSKSGTHISSVLSLGTSSAFGRSLFASEPIQE 69
>11_01_0486 - 3738887-3738986,3739557-3740826,3741894-3741966
Length = 480
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 ANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG 92
A+ S +++ ++ G GGGRSG+ + E +RRA GGG
Sbjct: 389 ADNNNSSNNNLGMLAALNAG-GGGRSGEHQHQHEGQSPAEMDHQRRANGGGG 439
>09_02_0556 + 10637362-10637575,10637728-10637825
Length = 103
Score = 27.5 bits (58), Expect = 6.1
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 45 SNTELVFSPRKRCSHQPPPF--TALRRSFSSTFSLIPEERAISPERPPPVPR 194
S+ L FSP + S P P TA R S S S RA + PP+PR
Sbjct: 2 SSLSLSFSPSLQSSRPPSPLPSTADRSSTPSAVSGRHRRRAPATLAVPPLPR 53
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 66 SPRKRCSHQPPPFTALRRSFSSTFS--LIPEERAISPERPPP 185
SP+ + PPP T ++S S F+ L SP++PPP
Sbjct: 177 SPKTTPTAPPPPTTTKKKSVKSLFNGLLSSPFTRPSPKQPPP 218
>04_01_0593 - 7817047-7817088,7817319-7817358,7817678-7817820
Length = 74
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -3
Query: 199 MSRGTGGGRSGDMALSSGM 143
MSRG+GGG +G +AL +G+
Sbjct: 1 MSRGSGGGGAGAVALPAGV 19
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 27.5 bits (58), Expect = 6.1
Identities = 24/61 (39%), Positives = 26/61 (42%)
Frame = +3
Query: 9 PACAPEYSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPV 188
PA AP L RS V P H PPP A F + S IP RA + RPP
Sbjct: 18 PAPAPPQVFLRRS----VLPPPPAPHHAPPPPGAHVHYFRAA-SPIPIFRAAASSRPPRP 72
Query: 189 P 191
P
Sbjct: 73 P 73
>01_05_0490 + 22672241-22674679
Length = 812
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 90 QPPPFTALRRSFSSTFSLIPEERAISPERPPPVP 191
Q PPF R T+ L P + P PPP P
Sbjct: 672 QQPPFYPRRAVVYYTYPLPPPSPPLPPPPPPPPP 705
>12_02_0481 - 19536201-19536459,19536647-19536687
Length = 99
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 78 SSAAKILALYWIALGDCTRAHRPAS 4
SSAA LYW+ GD A P S
Sbjct: 64 SSAASFRQLYWLRSGDAETASSPTS 88
>07_03_1790 -
29536497-29536625,29536734-29536848,29537357-29537508,
29537589-29537737,29538936-29539098,29539575-29539686,
29539791-29540152
Length = 393
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 36 LARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVP 191
L RS + VF P +R +PP L RS ++ S P + + E PPP P
Sbjct: 31 LGRSPSPSVFRPPRR---RPPLLLLLLRSSFASVSPGPAPGSGTGECPPPPP 79
>07_01_0862 - 7172083-7172931
Length = 282
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 69 PRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPRL 197
PRK+ P P ++ L P+++ + P PPP P L
Sbjct: 152 PRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQPPL 194
>05_03_0036 +
7605138-7605445,7605718-7605805,7606355-7606408,
7606860-7606910,7607625-7607642
Length = 172
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 36 LARSNTELVFSPRKRCSHQPPPFTALR--RSFSSTFSLIPEERAISPERPPPVPRLIQLI 209
L RS + +P CS +PPP + + R+ + SL P ++S P + +L+
Sbjct: 31 LRRSTRDAGLAPTGHCSAEPPPRSHVLPIRARHAGPSLSPPAPSLSNVPPNILRDAWELV 90
Query: 210 TWG 218
WG
Sbjct: 91 IWG 93
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 9 PACAPEYSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPP 185
P+ P R + + +PR R H P P AL S S++ S + RP P
Sbjct: 10 PSSPPSSPPPLRHSPAALGTPRSRRRHSPSPSLALTPSSSASASASASTSSRPKVRPSP 68
>01_06_0695 - 31292622-31293317
Length = 231
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 96 PPFTALRRSFSSTFSLIPEERAISPERPPPVPRLIQ 203
P + S SST P RA P P PVPR I+
Sbjct: 19 PSSSTSSSSSSSTSPSHPHHRAPLPPSPRPVPRTIE 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,996,413
Number of Sequences: 37544
Number of extensions: 302241
Number of successful extensions: 1475
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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