Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P16
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58757-3|AAC47921.3| 620|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC024859-27|AAK29978.4| 337|Caenorhabditis elegans Hypothetical... 29 1.4
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 27 5.5
Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical p... 27 9.7
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 27 9.7
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 27 9.7
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 27 9.7
U61946-9|AAC24393.1| 202|Caenorhabditis elegans Hypothetical pr... 27 9.7
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 27 9.7
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 27 9.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 27 9.7
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 27 9.7
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 27 9.7
AC024877-13|AAF60901.2| 710|Caenorhabditis elegans Nematode ast... 27 9.7
>U58757-3|AAC47921.3| 620|Caenorhabditis elegans Hypothetical
protein C01B10.10 protein.
Length = 620
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/51 (21%), Positives = 27/51 (52%)
Frame = -3
Query: 334 NMNSDAAIQRVGSTTKICFQAGCEIKCSKANRGRRSKRGPHVMSCMSRGTG 182
N D +++ + ++ AGC + + A + RS++ ++M C+ + +G
Sbjct: 237 NQYFDTLEEQIERSDRVVKHAGCSVPTNLARKMNRSQKEKYMMKCLQKLSG 287
>AC024859-27|AAK29978.4| 337|Caenorhabditis elegans Hypothetical
protein Y71H2AM.1 protein.
Length = 337
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = -3
Query: 271 GCEIKCSKANRGRRSKRGPHVMS-----CMSRGTGGGRSGDMALSSGMR 140
GC ++ + ++RG H+ + C+ G R+G++ L+SGMR
Sbjct: 266 GCNLRLQEMASAMCAERGAHLFATDERFCIDNGAMIARAGELMLASGMR 314
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 118 DLFLQLSPSYRKKEPYLRNDRRRCLDSYSSSHGDLACSCDLYSLCYI*SRTQLGNRF 288
DL + SY +EP R CLDS + H + S + I S+T + +RF
Sbjct: 226 DLGADVVHSYVGQEPSGRLFNEICLDSTNKPHNPMVNSGAIVITSLIKSKTNMADRF 282
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 93 PPPFTALRRSFSSTFSLIPEERAISPERPPPV 188
PPP + ++F S S++ E R E+P P+
Sbjct: 79 PPPVNSFEQAFGSNASIMGEIRKNGFEKPSPI 110
>Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical
protein Y57G11C.15 protein.
Length = 473
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 306 LWIAASLFIFWKCVQCPL 359
LW A +LF+F C Q PL
Sbjct: 33 LWTAITLFVFLVCCQIPL 50
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 21 PEYSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVP 191
P YS+L+ S + L+ + R+R + R S S T P+ +++ P PPP P
Sbjct: 319 PAYSQLSTSTSTLLRTRRERLEREEEG----RNSSSMT----PQPQSLVPPPPPPPP 367
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 63 FSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPRLIQLIT 212
FSPR+ + P A +S STF + + A + PPV +I L T
Sbjct: 279 FSPRR---YHHPTSVASHQSHPSTFKHMSKSIACQADELPPVKPMISLRT 325
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 63 FSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPRLIQLIT 212
FSPR+ + P A +S STF + + A + PPV +I L T
Sbjct: 279 FSPRR---YHHPTSVASHQSHPSTFKHMSKSIACQADELPPVKPMISLRT 325
>U61946-9|AAC24393.1| 202|Caenorhabditis elegans Hypothetical
protein F47C12.8 protein.
Length = 202
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 392 TDSTANRLNNTQGALHAFPEYEQRCGYP 309
TD A+ + ++A P+Y +RCGYP
Sbjct: 165 TDVNASGEQFVKFDINARPDYPRRCGYP 192
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 259 KCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG 92
K + NRG KRG + S G GGG G ++ + + GGG
Sbjct: 28 KPGRENRGGDEKRGNSNNAARSGGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGG 83
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 259 KCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG 92
K + NRG KRG + S G GGG G ++ + + GGG
Sbjct: 28 KPGRENRGGDEKRGNSNNAARSGGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGG 83
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -3
Query: 259 KCSKANRGRRSKRGPHVMSCMSRGTGGGRSGDMALSSGMREKVEEKDRRRAVNGGG 92
K + NRG KRG + S G GGG G ++ + + GGG
Sbjct: 28 KPGRENRGGDEKRGNSNNAARSGGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGG 83
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 199 MSRGTGGGRSGDMALSSGMREKVEEKDR 116
++R GG G + MREK+E+++R
Sbjct: 371 LNRMAAGGSGGPTSRQLAMREKIEQRER 398
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 199 MSRGTGGGRSGDMALSSGMREKVEEKDR 116
++R GG G + MREK+E+++R
Sbjct: 371 LNRMAAGGSGGPTSRQLAMREKIEQRER 398
>AC024877-13|AAF60901.2| 710|Caenorhabditis elegans Nematode
astacin protease protein30 protein.
Length = 710
Score = 26.6 bits (56), Expect = 9.7
Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Frame = +3
Query: 93 PPPFTALRRSFSSTFSLIPEERAISPERPP-PVPRLIQLITWGPRXXXXXXXX------X 251
PPPF ++ R+F T + R +P RP P R+ W R
Sbjct: 579 PPPFLSIERTFFQTTEKLFHHR--NPRRPGCPEKRIDHSAEWRTRAAPSKSSSCKRSQRS 636
Query: 252 XXXISHPAWKQILVVLPTLWIAASLFIFWKCVQCPLSVVKTIGRAI 389
I H W+ +LV+L + ++ ++ P + I R I
Sbjct: 637 ETRIGH--WRVLLVLLRNM-VSQRYLVYRIMESSPFGTIFAIVRGI 679
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,878,284
Number of Sequences: 27780
Number of extensions: 221662
Number of successful extensions: 840
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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