Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P15
(274 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 31 0.13
02_04_0327 - 22063453-22063725,22064093-22064404,22064724-220648... 29 0.38
04_04_0503 - 25701050-25701343,25701431-25701528,25701629-257016... 29 0.51
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 27 1.5
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589... 27 1.5
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409... 27 2.0
04_04_0713 + 27490547-27491401 27 2.0
04_04_0094 - 22770181-22770453,22770657-22770866,22771069-227713... 27 2.0
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 27 2.0
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 27 2.7
07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818... 27 2.7
02_02_0549 + 11410129-11412180 27 2.7
08_02_0426 - 16987352-16987841,16989537-16989640 26 3.6
05_01_0120 - 828834-831143 26 3.6
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 26 3.6
02_04_0027 - 19014033-19014127,19014219-19014315,19014560-190146... 26 4.7
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 26 4.7
07_01_0676 + 5062778-5063089,5063912-5064194,5064883-5065976 25 6.3
04_01_0160 + 1830671-1830779,1830898-1830971,1831374-1831671,183... 25 6.3
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 25 6.3
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 25 8.3
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028... 25 8.3
06_03_0763 - 24405525-24405701,24406209-24406368,24406924-244070... 25 8.3
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485... 25 8.3
01_01_0010 - 62670-62783,62877-63020,63339-63431,63665-63779,639... 25 8.3
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 42 RLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLA 164
++QET L E + T E V KSN+ S++EL +LA
Sbjct: 476 KIQETELKEHDGTTYEFLVKWVGKSNIHNSWISESELKALA 516
>02_04_0327 -
22063453-22063725,22064093-22064404,22064724-22064859,
22065901-22065974,22066084-22066221
Length = 310
Score = 29.5 bits (63), Expect = 0.38
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 48 QETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMS 227
Q+T + +++ + + S K + E+ Q ELS +D K + + AK +++S
Sbjct: 116 QQTVTGISQISFSAEGSVSPKKPSSLPEVAKQRELSGTLESEADAKLKKQNSEAKSKELS 175
Query: 228 TSDPF 242
SD F
Sbjct: 176 GSDIF 180
>04_04_0503 -
25701050-25701343,25701431-25701528,25701629-25701689,
25701772-25701842,25701922-25702048,25702160-25702244,
25702346-25702409,25702732-25702793,25703214-25703284,
25703700-25703795,25703960-25704108,25704196-25704265,
25704483-25704523,25704668-25704743
Length = 454
Score = 29.1 bits (62), Expect = 0.51
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +3
Query: 15 TTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHE 194
++ ++TD+ + TSLS ST SS +K N S T +S +S +P
Sbjct: 354 SSKATADTDKTRPTSLSRNGSTSRRAVVSS-SKPNCGD--PSDTNRTSRLFSSSSSRPSA 410
Query: 195 TDLAAKERKMSTSDPFLTSSRISS 266
A + L+ +R SS
Sbjct: 411 AQRALQSAGAELRSSSLSKTRKSS 434
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.5 bits (58), Expect = 1.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 15 TTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQ-TELSSLAIETS--DQK 185
TT S+ + N + + +T +++S++ +SQ TE S E + ++K
Sbjct: 636 TTENSSQISESAKKLPLTANKSQADTSTEKLSESDILAVASSQITEPSKKPSENTAENEK 695
Query: 186 PHETDLAAKERKMSTS 233
P +TD+A E ++ S
Sbjct: 696 PSQTDIATDELPLTQS 711
>01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,
5891941-5892073,5892629-5892732,5892867-5895780,
5895876-5895965,5896251-5896355,5896633-5896740,
5896826-5896876
Length = 1334
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +3
Query: 30 SETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHE 194
++T+ L ++SL ++S Y+E+++ + ++ S E+S L ++ SD+ HE
Sbjct: 937 NDTNGLPKSSLF-SSSHYSEKSSPPLEYMKISFHPMSAFEMSKLDLDFSDENLHE 990
>05_07_0311 -
29139883-29140359,29140641-29140788,29140883-29140959,
29141227-29141387,29141785-29142803,29142905-29142996,
29143117-29143256,29143397-29143574
Length = 763
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 DYTTSGVSETDR-LQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSS 158
D TS VS +D S SETNST+ ++ T + + S++E S+
Sbjct: 226 DVGTSSVSSSDPGTSPYSASETNSTFKKEATKDNFQHSDVNVSDSESEAST 276
>04_04_0713 + 27490547-27491401
Length = 284
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 66 ETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHET--DLAAKERKMSTSD 236
E ++++ T+SSV+ S ++ +++ + SSL + +P + AAK+RK + ++
Sbjct: 2 EADASHTPTTSSSVSVSFSSSSLSTSSSTSSLVDNGAQDRPKSSKPKHAAKKRKRAAAE 60
>04_04_0094 -
22770181-22770453,22770657-22770866,22771069-22771380,
22771767-22771937,22772078-22772184,22772541-22772622,
22773202-22773330
Length = 427
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 48 QETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMS 227
Q+T + +++ + S K + E+ Q ELS ++ K ++ AK +++S
Sbjct: 163 QQTVTGISQISFSADGSVSPKKPSSLPEVAKQRELSGTLETDAEAKMNKQHSEAKSKELS 222
Query: 228 TSDPF 242
SD F
Sbjct: 223 GSDIF 227
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 TRDYTTSGVSETDRLQETSLSETNSTY-NEQTTSSVAKSNVATEITSQTELSS 158
TRDY G S+ + +S +NSTY N SS + N + +S + +S
Sbjct: 755 TRDYDNGGRSDNNPYYNSSTWSSNSTYSNNAAWSSNSSYNSNSAWSSNSSYNS 807
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 18 TSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKP-HE 194
T+ V + + T + +T E+T ++ + +TE S++A ET KP E
Sbjct: 263 TAEVKPAEETETTPMVQTEVKLEEETETTPVAETTEVKPAEETETSTVA-ETLQVKPAEE 321
Query: 195 TD 200
TD
Sbjct: 322 TD 323
>07_03_1783 +
29480987-29481165,29481526-29481685,29481767-29481862,
29481948-29482062,29482175-29482337,29482536-29482707,
29483924-29484013,29484137-29484598,29484675-29485268,
29485486-29485554,29485810-29485902,29486432-29486677,
29487277-29487417,29487748-29487828,29487911-29487973,
29488059-29488166,29488303-29488383,29488474-29488521,
29488979-29489053,29489973-29490068,29490156-29490236,
29490295-29490402,29490989-29491033,29491119-29491202,
29491379-29491482,29491581-29491728
Length = 1233
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 63 SETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKE 215
SET S + +S + + ++ +TSQ L L + D DL KE
Sbjct: 597 SETRSPSSSMVEASQTQFSYSSTLTSQHVLPKLVVTNIDLSDEAKDLLQKE 647
>02_02_0549 + 11410129-11412180
Length = 683
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 42 RLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTE 149
RL+ T ++TN T NE+ S + S V +T+ T+
Sbjct: 73 RLRRTPSTKTNGTGNEKAVRSFSSSFVFGIVTADTQ 108
>08_02_0426 - 16987352-16987841,16989537-16989640
Length = 197
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 69 TNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAK 212
T S+++ TTS VA + S + ++ A ++PH TD AK
Sbjct: 151 TGSSHSH-TTSDVASATNTNATNSSSPSAAAATAEVSKQPHTTDTDAK 197
>05_01_0120 - 828834-831143
Length = 769
Score = 26.2 bits (55), Expect = 3.6
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 66 ETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTSDPFL 245
ET+ E T SS+ + ++ + S+L + + LAA+ STS PFL
Sbjct: 448 ETHLPARESTWSSLRRKFISRSLARVYSDSALIRDLDPRVDRVQHLAAEA---STSPPFL 504
Query: 246 TSSRISS 266
+ S +SS
Sbjct: 505 SPSSLSS 511
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 26.2 bits (55), Expect = 3.6
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 12 YTTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPH 191
Y + ET +L+ + NST NEQ+ +S+ + T+ T +L+ D KP
Sbjct: 679 YGNRTLDETLKLKGKQKPKKNSTQNEQSATSLNGLTLGFGDTAATR-ENLSAGFGDTKPP 737
Query: 192 E 194
E
Sbjct: 738 E 738
>02_04_0027 -
19014033-19014127,19014219-19014315,19014560-19014673,
19014759-19014923,19015169-19015306,19015402-19015478,
19015572-19015686,19015756-19015861,19016182-19016243,
19016407-19016472,19016628-19016810,19017359-19017415,
19017848-19017896,19017983-19018131,19019203-19019250,
19020061-19020201
Length = 553
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 195 TDLAAKERKMSTSDPFLTSSRISSPG 272
+DL K+ +S SDPFL SRIS G
Sbjct: 198 SDLEIKDL-LSKSDPFLLISRISESG 222
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +3
Query: 57 SLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDL 203
+L T + T A VAT+ T S +ETS Q P E L
Sbjct: 1630 NLESTMVASTQNLTIFPASKEVATQSNLSTLPGSQTVETSQQPPAEAKL 1678
Score = 25.0 bits (52), Expect = 8.3
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 18 TSGVSETDRLQETSLSETNSTYNEQTTSS--VAKSNVATEITSQTELSSLAIETSDQKPH 191
T+GV T ++ +T+ ++ + + T++ A V+TE+ +QT+ SS+ S P
Sbjct: 1741 TAGV--TAKVDDTAAADPLDSETQSYTAAHKPAALLVSTEVETQTDQSSMLERQSISVPL 1798
Query: 192 ETDLAAKERKMSTSDPFLTSSR 257
+ + + ++P T SR
Sbjct: 1799 VQSSLSSQNPPAEAEPASTLSR 1820
>07_01_0676 + 5062778-5063089,5063912-5064194,5064883-5065976
Length = 562
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +3
Query: 60 LSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTSDP 239
L+ T N + VA + E L + +DQ LAA+ KM+ +D
Sbjct: 31 LNSTTPQGNTALHIAAGLGRVAFAEAAAAEHGDLLVARNDQGDTPLHLAARAGKMAVADM 90
Query: 240 FLTSSRISSP 269
+T ++ P
Sbjct: 91 LITFITMAGP 100
>04_01_0160 +
1830671-1830779,1830898-1830971,1831374-1831671,
1831900-1832867,1833504-1833716,1834034-1834237,
1835063-1835104
Length = 635
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 48 QETSLSETNSTYNEQTTSSVAKSNVATEITSQTEL 152
QETSL + + Y E+ ++ AK + E T + L
Sbjct: 572 QETSLLDDFNFYEEKESARCAKKGINAESTHEARL 606
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +3
Query: 93 TTSSVAKSNVATEITSQTELSSLAIETSDQKP--HET----DLAAKERKMSTSDPFLTSS 254
TTS +K+N ++ + S++ TS+ +P +E+ D+AA + K +S +SS
Sbjct: 467 TTSQTSKNNQQNTLSDSFGILSVSTFTSENRPITNESRSTDDIAAAKNKERSSVTINSSS 526
Query: 255 RISSP 269
SP
Sbjct: 527 TSPSP 531
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/34 (29%), Positives = 24/34 (70%)
Frame = +3
Query: 27 VSETDRLQETSLSETNSTYNEQTTSSVAKSNVAT 128
++ T +++ +ETNS Y+E++ S+++ S+ +T
Sbjct: 450 LAPTSSIEDLYDNETNSCYSEESCSTMSGSHHST 483
>07_03_1180 -
24601631-24602142,24602518-24602581,24602811-24602876,
24602949-24603070,24603170-24603344,24603466-24603701,
24603781-24604129,24605009-24605146,24605242-24605289
Length = 569
Score = 25.0 bits (52), Expect = 8.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Frame = +3
Query: 39 DRLQETSLSETNST--------YNEQTTSSVAKSNVATEITSQTELSSLAIETSD 179
D LQET L+ETN + N+ + V + + TS+ E S ET+D
Sbjct: 135 DSLQETLLTETNDSPQERLLTEINDSLPNHVDDNTHSVTFTSEPETSGNVNETAD 189
>06_03_0763 -
24405525-24405701,24406209-24406368,24406924-24407005,
24407098-24407167,24407443-24407607,24407731-24407874,
24408467-24408715,24409006-24409221,24409306-24409398
Length = 451
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 201 LAAKERKMSTSDPFLTSSRISSP 269
+AAK +S+S PF++S R+SSP
Sbjct: 1 MAAKAAALSSS-PFVSSRRLSSP 22
>03_03_0206 +
15447054-15447181,15448243-15448298,15448373-15448515,
15448630-15448827,15448901-15449100,15449585-15449684,
15449769-15450350,15450434-15450556,15451028-15451108,
15451188-15451495,15451577-15451816,15452261-15452345,
15452429-15452606,15453053-15453227,15453826-15453982
Length = 917
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +3
Query: 189 HETDLAAKERKMSTSDPFLTSS 254
+ +D+A KE+++ +S+P TS+
Sbjct: 373 NHSDMACKEKRLKSSEPIRTSN 394
>01_01_0010 -
62670-62783,62877-63020,63339-63431,63665-63779,
63902-64152,64248-64431,64694-64950
Length = 385
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = +3
Query: 6 RDYTTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQK 185
R Y +S+ R ++ +L ++ + A+S + ++ + + A+E ++
Sbjct: 8 RPYKRPAISDQQRRRDLALQAQSA--RRADAQARARSLANSLLSPSSAAADTAVEGDSER 65
Query: 186 PHETDLAAKERKMSTSD 236
HE +A K+ SD
Sbjct: 66 DHEPTVAEAASKLRGSD 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,495,991
Number of Sequences: 37544
Number of extensions: 73474
Number of successful extensions: 224
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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