Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P15
(274 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 35 0.007
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 32 0.062
At4g39860.1 68417.m05647 expressed protein 31 0.14
At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763... 30 0.19
At2g34150.1 68415.m04180 expressed protein 29 0.44
At5g62550.1 68418.m07850 expressed protein 29 0.58
At4g39860.2 68417.m05648 expressed protein 29 0.58
At3g14460.1 68416.m01832 disease resistance protein (NBS-LRR cla... 28 1.0
At2g15390.2 68415.m01761 xyloglucan fucosyltransferase, putative... 27 1.3
At2g15390.1 68415.m01760 xyloglucan fucosyltransferase, putative... 27 1.3
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 27 2.3
At4g11100.1 68417.m01802 expressed protein 27 2.3
At1g37020.1 68414.m04616 Ulp1 protease family protein 27 2.3
At1g61080.1 68414.m06877 proline-rich family protein 26 3.1
At5g16540.3 68418.m01936 zinc finger (CCCH-type) family protein ... 26 4.1
At5g16540.2 68418.m01935 zinc finger (CCCH-type) family protein ... 26 4.1
At5g16540.1 68418.m01934 zinc finger (CCCH-type) family protein ... 26 4.1
At4g00870.1 68417.m00118 basic helix-loop-helix (bHLH) family pr... 26 4.1
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 25 5.4
At3g21290.1 68416.m02690 dentin sialophosphoprotein-related cont... 25 5.4
At2g39140.1 68415.m04809 pseudouridine synthase family protein 25 5.4
At2g22795.1 68415.m02704 expressed protein 25 5.4
At2g20180.2 68415.m02360 basic helix-loop-helix (bHLH) family pr... 25 5.4
At2g20180.1 68415.m02359 basic helix-loop-helix (bHLH) family pr... 25 5.4
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 25 5.4
At1g30480.1 68414.m03726 DNA-damage-repair/toleration protein, c... 25 5.4
At1g24190.1 68414.m03051 paired amphipathic helix repeat-contain... 25 5.4
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 25 5.4
At5g52950.1 68418.m06570 expressed protein ; expression supporte... 25 7.2
At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative... 25 7.2
At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative... 25 7.2
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 25 7.2
At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical... 25 7.2
At4g01060.2 68417.m00144 myb family transcription factor contain... 25 7.2
At3g49160.1 68416.m05373 pyruvate kinase family protein similar ... 25 7.2
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 25 7.2
At2g45900.1 68415.m05708 expressed protein 25 7.2
At1g72250.1 68414.m08353 kinesin motor protein-related 25 7.2
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 25 7.2
At5g52230.1 68418.m06483 expressed protein 25 9.5
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 25 9.5
At4g35740.2 68417.m05073 DNA helicase (RECQl3) identical to DNA ... 25 9.5
At4g35740.1 68417.m05072 DNA helicase (RECQl3) identical to DNA ... 25 9.5
At2g01800.1 68415.m00110 COP1-interacting protein-related simila... 25 9.5
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 35.1 bits (77), Expect = 0.007
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 30 SETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQT--ELSSLAIETSDQKPHETDL 203
S+T + + ET + ++T+ + + T+Q+ E +S +T+ QK HET
Sbjct: 40 SQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQ 99
Query: 204 AAKERKMSTSD 236
AAKE+ D
Sbjct: 100 AAKEKTSQAGD 110
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 31.9 bits (69), Expect = 0.062
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +3
Query: 30 SETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHE 194
SE + E S+ + N E TT+ N E TS+ E E D+K HE
Sbjct: 264 SEENGKGEKSMKDENGQQEEHTTAEEESGNKEEESTSKDENMEQQEERKDEKKHE 318
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 30 SETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPH---ETD 200
SET + +E E ++ NE+T + A+E + E S+ E Q+ H E +
Sbjct: 232 SETSKNEENGQPEEQNSGNEETGQQNEEKTTASEENGKGE-KSMKDENGQQEEHTTAEEE 290
Query: 201 LAAKERKMSTSD 236
KE + ++ D
Sbjct: 291 SGNKEEESTSKD 302
>At4g39860.1 68417.m05647 expressed protein
Length = 299
Score = 30.7 bits (66), Expect = 0.14
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +3
Query: 9 DYTTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKP 188
D TT + Q+T + +++ S K TE+ Q ELS + +D K
Sbjct: 92 DATTDPKTGLRYYQQTLNGMSQISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEADLKS 151
Query: 189 HETDLAAKERKMSTSDPFLTSSRI 260
++ +AK ++S D F S I
Sbjct: 152 NKQISSAKIEEISGHDIFAPPSEI 175
>At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763
Dehydrin ERD14 {Arabidopsis thaliana}
Length = 185
Score = 30.3 bits (65), Expect = 0.19
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 60 LSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAK-ERKMSTSD 236
++E EQ VA + E+T + L + + KP ET +A++ E+K+ S+
Sbjct: 1 MAEEIKNVPEQEVPKVATEESSAEVTDRGLFDFLGKKKDETKPEETPIASEFEQKVHISE 60
Query: 237 P 239
P
Sbjct: 61 P 61
>At2g34150.1 68415.m04180 expressed protein
Length = 700
Score = 29.1 bits (62), Expect = 0.44
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +3
Query: 12 YTTSGVSETDRLQETSLSETNSTYN---EQTTSSVAKSNVATEI----TSQTELSSLAIE 170
YT SE D + + + YN EQ T ++ + E TS+ LSS +
Sbjct: 246 YTIDSESENDEAFQATKEVQKNLYNDITEQETEKISNNFSVDETKCAATSELHLSSSPVY 305
Query: 171 TSDQKPHETDLAAKERKMST 230
SD+ H+ AA E T
Sbjct: 306 KSDELIHQDPWAASEISSGT 325
>At5g62550.1 68418.m07850 expressed protein
Length = 487
Score = 28.7 bits (61), Expect = 0.58
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 27 VSETDRL--QETSLSETNSTYNEQTTSSVAKSNVATEITSQTEL-SSLAIETSDQKPHET 197
VSET + +ET++S N + + S+ SN+ +EIT L S +T+ +K
Sbjct: 220 VSETSSVVAEETAMSLNNDNDVQSSFSTPGNSNITSEITKDDALQDSTVTKTTKEKDALQ 279
Query: 198 DLAAKE 215
D + E
Sbjct: 280 DSSVTE 285
>At4g39860.2 68417.m05648 expressed protein
Length = 298
Score = 28.7 bits (61), Expect = 0.58
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 42 RLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERK 221
R +T + +++ S K TE+ Q ELS + +D K ++ +AK +
Sbjct: 102 RYYQTLNGMSQISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEE 161
Query: 222 MSTSDPFLTSSRI 260
+S D F S I
Sbjct: 162 ISGHDIFAPPSEI 174
>At3g14460.1 68416.m01832 disease resistance protein (NBS-LRR class),
putative domain signature NBS-LRR exists, suggestive of a
disease resistance protein.
Length = 1424
Score = 27.9 bits (59), Expect = 1.0
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 STYNEQTTSSVAKSNVATEITSQTELSSLA--IETSDQKPHETDLAAKERKMSTSDPFLT 248
ST + +S ++SN E+TS + LSSL +T D +ET L + ++ +P +
Sbjct: 945 STSAQPGFASSSQSNDDNEVTSTSSLSSLPKDRQTEDFDQYETQLGSLPQQF--EEPAVI 1002
Query: 249 SSRIS 263
S+R S
Sbjct: 1003 SARYS 1007
>At2g15390.2 68415.m01761 xyloglucan fucosyltransferase, putative
(FUT4) identical to SP|Q9SJP2 Probable
fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 500
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +3
Query: 21 SGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETD 200
S + ++ + TSLS S E S ++N+ EI + S + +D+K H+
Sbjct: 344 SNIPKSKAVLVTSLSPEYSKKLENMFSE--RANMTGEIIKVYQPSGERYQQTDKKVHDQK 401
Query: 201 LAAKERKMSTSDPFLTSSR 257
A+ +S +D + SSR
Sbjct: 402 ALAEMYLLSLTDNIVASSR 420
>At2g15390.1 68415.m01760 xyloglucan fucosyltransferase, putative
(FUT4) identical to SP|Q9SJP2 Probable
fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 503
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +3
Query: 21 SGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETD 200
S + ++ + TSLS S E S ++N+ EI + S + +D+K H+
Sbjct: 347 SNIPKSKAVLVTSLSPEYSKKLENMFSE--RANMTGEIIKVYQPSGERYQQTDKKVHDQK 404
Query: 201 LAAKERKMSTSDPFLTSSR 257
A+ +S +D + SSR
Sbjct: 405 ALAEMYLLSLTDNIVASSR 423
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 TSLSETNSTYNEQTTSSVAKSNVATEITS-QTELSSLAIETSDQKPHETDLAAKERKMST 230
+S E E+T + + EI Q +LSS+ T K ET+ KE+K+ T
Sbjct: 124 SSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSI---TERLKKAETESKEKEKKLET 180
Query: 231 SDPFLTS 251
++ +T+
Sbjct: 181 AETHVTA 187
>At4g11100.1 68417.m01802 expressed protein
Length = 287
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = +3
Query: 3 TRDYTTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQ 182
T+ SGV ETD L +E N N T ++ S+ + E + + + D+
Sbjct: 153 TQSAVISGVGETDNLIGQGENEANQNVNNAVTDAIMISDDENDNNPPIESNISSHRSGDR 212
Query: 183 KPHE 194
E
Sbjct: 213 NQEE 216
>At1g37020.1 68414.m04616 Ulp1 protease family protein
Length = 611
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 13 TLLQEYLKQTGYKKLHYLRLIQRITNKLP 99
T+L EY+ + +KK + + ++R+T K P
Sbjct: 511 TMLSEYILEKDHKKSYAMLEVKRVTKKNP 539
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 123 ATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTSDPFLTSS-RISSP 269
A+ S++ + +S KP + + + K S +LTSS R+SSP
Sbjct: 18 ASPKVSKSSKQDVKTSSSSPKPSSSPIPIRSSKSILSGSYLTSSRRVSSP 67
>At5g16540.3 68418.m01936 zinc finger (CCCH-type) family protein
identical to zinc finger protein 3 [Arabidopsis
thaliana] gi|4689376|gb|AAD27875; contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Length = 354
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 78 TYNEQTTSSVAKSNVATEITSQTELSSLAIETS-DQKP 188
TYN T S S++ E TEL +L + +S + KP
Sbjct: 299 TYNNNTASPSPSSSLHQETAITTELRNLLVSSSVEAKP 336
>At5g16540.2 68418.m01935 zinc finger (CCCH-type) family protein
identical to zinc finger protein 3 [Arabidopsis
thaliana] gi|4689376|gb|AAD27875; contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Length = 368
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 78 TYNEQTTSSVAKSNVATEITSQTELSSLAIETS-DQKP 188
TYN T S S++ E TEL +L + +S + KP
Sbjct: 313 TYNNNTASPSPSSSLHQETAITTELRNLLVSSSVEAKP 350
>At5g16540.1 68418.m01934 zinc finger (CCCH-type) family protein
identical to zinc finger protein 3 [Arabidopsis
thaliana] gi|4689376|gb|AAD27875; contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Length = 375
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 78 TYNEQTTSSVAKSNVATEITSQTELSSLAIETS-DQKP 188
TYN T S S++ E TEL +L + +S + KP
Sbjct: 320 TYNNNTASPSPSSSLHQETAITTELRNLLVSSSVEAKP 357
>At4g00870.1 68417.m00118 basic helix-loop-helix (bHLH) family
protein similar to the myc family of helix-loop-helix
transcription factors; contains Pfam profile PF00010:
Helix-loop-helix DNA-binding domain; PMID: 12679534
Length = 423
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 27 VSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTEL 152
++ETD+L +S + + S+ Q +KSN +++ Q ++
Sbjct: 310 MTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKI 351
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 24 GVSETDRLQETSLSETNSTYNEQTTSS 104
G S TDR Q++S S + + YN ++ S
Sbjct: 11 GRSATDRRQQSSHSSSTNRYNSRSAQS 37
>At3g21290.1 68416.m02690 dentin sialophosphoprotein-related
contains weak similarity to Dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 1192
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 156 SLAIETSDQKPHETDLAAKERK 221
SL ETSD+KP E D + K+ K
Sbjct: 830 SLPTETSDRKPDELDGSDKDPK 851
>At2g39140.1 68415.m04809 pseudouridine synthase family protein
Length = 410
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 150 LSSLAIETSDQKPHETDLAAKERKMSTSDPFLTSSRISSP 269
+ +LAI+ + Q P + D + K++ +TS T++ SSP
Sbjct: 95 IHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTT-ASSP 133
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 25.4 bits (53), Expect = 5.4
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 24 GVSETDRL--QETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHET 197
G ET + QE S + + T +++ +SS +S T + E SS ET D+ ET
Sbjct: 415 GSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDK---ET 471
Query: 198 DLAAKERKMSTS 233
+ AKE+ S+S
Sbjct: 472 E--AKEKVESSS 481
>At2g20180.2 68415.m02360 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 478
Score = 25.4 bits (53), Expect = 5.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 21 SGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETD 200
SG++ ++S YN + +VA + A EIT + E +K + D
Sbjct: 191 SGLTRRTDGTDSSAVAGGGAYNRKG-KAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDD 249
Query: 201 LAAKERKMSTSD 236
KER+ +T+D
Sbjct: 250 RKRKEREATTTD 261
>At2g20180.1 68415.m02359 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 407
Score = 25.4 bits (53), Expect = 5.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 21 SGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETD 200
SG++ ++S YN + +VA + A EIT + E +K + D
Sbjct: 120 SGLTRRTDGTDSSAVAGGGAYNRKG-KAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDD 178
Query: 201 LAAKERKMSTSD 236
KER+ +T+D
Sbjct: 179 RKRKEREATTTD 190
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 33 ETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTE 149
ETD ETS + T+ TTSS S + + +TE
Sbjct: 1995 ETDIKPETSAATTSPVSTAPTTSSTLASAITSSGAPETE 2033
>At1g30480.1 68414.m03726 DNA-damage-repair/toleration protein,
chloroplast (DRT111) nearly identical to SP|P42698
DNA-damage-repair/toleration protein DRT111, chloroplast
precursor {Arabidopsis thaliana}; contains Pfam profiles
PF01585: G-patch domain, PF00076: RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain)
Length = 387
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 111 KSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTSDP 239
K ATE + E+ E ++ E + KER+ SDP
Sbjct: 117 KKRKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDP 159
>At1g24190.1 68414.m03051 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1353
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 63 SETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKER 218
S+ T N + + +++ A T+Q E + TSD+KP + ER
Sbjct: 780 SQLGQTSNSERDGAAGRTSDALCETAQHEKMLKNVVTSDEKPESKQAVSIER 831
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 63 SETNSTYNEQTTSSVAKSNVATEIT-SQTELSSLAIETSDQKPHETDLAAKERK 221
S +S + +Q V++SNV+ +T ++ LSS E+ + TD + +ER+
Sbjct: 257 SRRSSVWGKQVREEVSQSNVSDGLTRKESSLSSDESESDYESDSSTD-SERERQ 309
>At5g52950.1 68418.m06570 expressed protein ; expression supported
by MPSS
Length = 945
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 117 NVATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTSDPFLTSSRIS 263
+VA+ + ++ + IE + ETD A+ ++ D L+ +RIS
Sbjct: 543 SVASNCNALEDVDANPIEEKNNSSEETDKASSPLPLAEEDIALSGNRIS 591
>At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 33 ETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKP 188
+TD TS+ +TNST ++TT S+ + +T +S+ E +KP
Sbjct: 379 KTDTDGTTSVEDTNSTDVKETTESLPDPVLRLYLTDDRG-NSIEAEMLKEKP 429
>At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 33 ETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKP 188
+TD TS+ +TNST ++TT S+ + +T +S+ E +KP
Sbjct: 379 KTDTDGTTSVEDTNSTDVKETTESLPDPVLRLYLTDDRG-NSIEAEMLKEKP 429
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 51 ETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSS 158
+TSLSET +T SS A +A +++E S+
Sbjct: 6 KTSLSETTTTTTPTGKSSPATPRIAKRTVNKSETSN 41
>At4g38540.1 68417.m05456 monooxygenase, putative (MO2) identical to
GI:3426064
Length = 407
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 60 LSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSD 179
L+ T++ +E+T S + K V +I E +ET+D
Sbjct: 220 LTHTSTDIDEETNSEILKEFVLNKIKDLPENIKNVVETTD 259
>At4g01060.2 68417.m00144 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 74
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 132 ITSQTELSSLAIETSDQKPHETDLAAKERKM 224
+TS +E+SSL E + E DL ++ K+
Sbjct: 16 VTSSSEVSSLEWEVVNMSQEEEDLVSRMHKL 46
>At3g49160.1 68416.m05373 pyruvate kinase family protein similar to
SP|Q92122 Pyruvate kinase, muscle isozyme (EC 2.7.1.40)
(Cytosolic thyroid hormone binding protein) (CTHBP)
{Xenopus laevis}; contains Pfam profile PF00224:
Pyruvate kinase, barrel domain
Length = 710
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = -1
Query: 253 ELVRKGSEVDIFLSLAAKSVSCGF*SLVSMANELSSVCDVISVATLDFATELV 95
E ++ + + I ++ +V CG+ L +M E+ ++C V + AT+++
Sbjct: 599 EAMKCSNPLGIMIARGDLAVECGWERLANMQEEIIAICKAARVPVI-MATQVL 650
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 244 RKGSEVDIFLSLAAKSVSCGF*SLVSMA 161
RKG+ DIF S+ A S GF S S A
Sbjct: 1178 RKGTRQDIFNSVGAMSTVVGFLSSQSAA 1205
>At2g45900.1 68415.m05708 expressed protein
Length = 720
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/70 (20%), Positives = 31/70 (44%)
Frame = +3
Query: 54 TSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTS 233
+S+ + ++ +E + + V E S + ++ S+ + + TD+ K +S
Sbjct: 443 SSIIQQDAYIDEDEHKQLLEKEVLKEGQSPCSPPNSSVRMSECQENTTDVLGKSSPVSVL 502
Query: 234 DPFLTSSRIS 263
+PF T S
Sbjct: 503 EPFFTDDDTS 512
>At1g72250.1 68414.m08353 kinesin motor protein-related
Length = 1195
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +3
Query: 66 ETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKM 224
ET +TY E+T K + T ++ QT+ + + + + +D + ++M
Sbjct: 308 ETTATYVEETGMLAVKGSTDTVLSQQTQENLVCRAEEEAEGMRSDCEQQRKEM 360
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 25.0 bits (52), Expect = 7.2
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +3
Query: 6 RDYTTSGVSETDRLQETSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIET 173
R Y S VSE L LS+ NS E SN+ + + + A+ET
Sbjct: 760 RSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYSNLFEDWQVALSVEAKAVET 815
>At5g52230.1 68418.m06483 expressed protein
Length = 746
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 84 NEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKERKMSTS 233
N TTS K TEI E++ E S QKPH + R + S
Sbjct: 409 NHVTTSGSKK----TEIPLNKEVAQSCNEQSSQKPHAAAATSNNRVSADS 454
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related contains
weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +3
Query: 84 NEQTTSSVAKSNVATEITSQTELSSLAIETSDQK---PHETDLAAKERKMSTSDPFLTSS 254
N+Q +S + S +ELS+ A++ D+ A R +S S P + SS
Sbjct: 915 NQQMAVGTRQSAAINSVNSSSELSTPAVKERDESSDFDQRGHSAEGFRMLSASQPLVASS 974
>At4g35740.2 68417.m05073 DNA helicase (RECQl3) identical to DNA
Helicase [Arabidopsis thaliana] GI:11121447; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 620
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 75 STYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKE 215
S Y Q S+V A+ T LSS+ +Q+P E L A E
Sbjct: 496 SFYYSQIASTVRWLGTASRDELMTRLSSVVSLAREQEPLEEPLLATE 542
>At4g35740.1 68417.m05072 DNA helicase (RECQl3) identical to DNA
Helicase [Arabidopsis thaliana] GI:11121447; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 713
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 75 STYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKPHETDLAAKE 215
S Y Q S+V A+ T LSS+ +Q+P E L A E
Sbjct: 589 SFYYSQIASTVRWLGTASRDELMTRLSSVVSLAREQEPLEEPLLATE 635
>At2g01800.1 68415.m00110 COP1-interacting protein-related similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646, COP1-interacting protein 4.1
(CIP4.1) [Arabidopsis thaliana] GI:13160650
Length = 304
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 21 SGVSETDRLQE----TSLSETNSTYNEQTTSSVAKSNVATEITSQTELSSLAIETSDQKP 188
SG E D LQ+ L ++ + + + +A+ + T+ + E+ L T +
Sbjct: 189 SGTMEQDDLQKEVTNADLVMSDQDKDLEKDNLLAELHQTTDDAEKEEIIGLVNATPEAIE 248
Query: 189 HETDLAAKER 218
+ET+++AKE+
Sbjct: 249 NETEMSAKEK 258
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,675,002
Number of Sequences: 28952
Number of extensions: 65863
Number of successful extensions: 264
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 12,070,560
effective HSP length: 68
effective length of database: 10,101,824
effective search space used: 222240128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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