Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P14
(403 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 269 5e-73
SB_56| Best HMM Match : Actin (HMM E-Value=0) 269 5e-73
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 269 5e-73
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 268 9e-73
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 6e-53
SB_54| Best HMM Match : Actin (HMM E-Value=0) 185 1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 2e-42
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 158 2e-39
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 155 2e-38
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 101 2e-22
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 1e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 2e-08
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 6e-04
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 37 0.005
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 36 0.016
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.27
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 29 1.1
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 1.4
SB_45713| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3) 28 2.5
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 27 4.3
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_52691| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 5.7
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 27 5.7
SB_58943| Best HMM Match : rve (HMM E-Value=6.1e-13) 27 5.7
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 27 5.7
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11) 27 5.7
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7) 27 5.7
SB_12546| Best HMM Match : JTB (HMM E-Value=2.4) 27 5.7
SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 27 7.6
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 26 10.0
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 26 10.0
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 26 10.0
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 26 10.0
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 26 10.0
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 26 10.0
SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35) 26 10.0
SB_653| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.2) 26 10.0
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 269 bits (660), Expect = 5e-73
Identities = 124/127 (97%), Positives = 127/127 (100%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 200
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 133
Query: 201 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 380
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 381 TERGYSF 401
TERGYSF
Sbjct: 194 TERGYSF 200
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 269 bits (660), Expect = 5e-73
Identities = 124/127 (97%), Positives = 127/127 (100%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 200
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 74 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 133
Query: 201 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 380
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 381 TERGYSF 401
TERGYSF
Sbjct: 194 TERGYSF 200
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 269 bits (660), Expect = 5e-73
Identities = 124/127 (97%), Positives = 127/127 (100%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 200
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 201 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 380
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 381 TERGYSF 401
TERGYSF
Sbjct: 195 TERGYSF 201
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 268 bits (658), Expect = 9e-73
Identities = 123/127 (96%), Positives = 127/127 (100%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 200
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 201 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 380
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKIL 194
Query: 381 TERGYSF 401
TERGYSF
Sbjct: 195 TERGYSF 201
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 202 bits (494), Expect = 6e-53
Identities = 94/99 (94%), Positives = 97/99 (97%), Gaps = 2/99 (2%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 200
GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMY
Sbjct: 75 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
Query: 201 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 311
VAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 185 bits (451), Expect = 1e-47
Identities = 83/117 (70%), Positives = 99/117 (84%)
Frame = +3
Query: 51 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 230
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 231 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 401
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 168 bits (408), Expect = 2e-42
Identities = 73/128 (57%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 197
GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE + +
Sbjct: 77 GIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGV 136
Query: 198 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 377
Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K+
Sbjct: 137 YIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKL 196
Query: 378 LTERGYSF 401
+ RGY+F
Sbjct: 197 MLLRGYAF 204
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 165 bits (400), Expect = 2e-41
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +3
Query: 144 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 323
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 324 ILRLDLAGRDLTDYLMKILTERGYSF 401
I+RLDLAGRDLTDYLMKILTERGYSF
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSF 163
Score = 34.7 bits (76), Expect = 0.029
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTF 71
GIVTNWDDMEKI TF
Sbjct: 74 GIVTNWDDMEKIMFETF 90
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 158 bits (383), Expect = 2e-39
Identities = 66/101 (65%), Positives = 89/101 (88%)
Frame = +3
Query: 99 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 278
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 279 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 401
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 155 bits (375), Expect = 2e-38
Identities = 71/79 (89%), Positives = 76/79 (96%)
Frame = +3
Query: 165 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 344
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 345 GRDLTDYLMKILTERGYSF 401
GRDLTDYLMK++TERGYSF
Sbjct: 61 GRDLTDYLMKLMTERGYSF 79
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 101 bits (243), Expect = 2e-22
Identities = 45/122 (36%), Positives = 77/122 (63%)
Frame = +3
Query: 21 GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 200
G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N PA +
Sbjct: 7 GMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNVPAFF 66
Query: 201 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 380
+ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++
Sbjct: 67 LCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMF 126
Query: 381 TE 386
E
Sbjct: 127 EE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 59.3 bits (137), Expect = 1e-09
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 177 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 353
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 354 LTDYLMKILTER 389
+T ++ ++L ER
Sbjct: 98 ITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 210 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 386
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 387 RGYSF 401
RG++F
Sbjct: 827 RGHNF 831
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 54 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 233
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 234 SGRTTGIV 257
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 37.1 bits (82), Expect = 0.005
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = +3
Query: 18 RGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 197
+G + NWD ++IW +TF E + M +I+FE +N A+
Sbjct: 295 KGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFKAL 334
Query: 198 YVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 332
A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 335 SRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 35.5 bits (78), Expect = 0.016
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 24 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 116
IV +WD ME+ W + LR PE+H LL
Sbjct: 306 IVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.15
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 246 TGIVLDSGDGVSHTVPI 296
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.27
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 141 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 257
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.7 bits (66), Expect = 0.46
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = +1
Query: 103 TQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYP 282
T + P P+TPKPT PP P TRP VP + P
Sbjct: 890 TTTAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRP 949
Query: 283 TQYPSTRVTPYRTPS 327
T P T P P+
Sbjct: 950 TPPPPTSALPPPIPA 964
Score = 26.6 bits (56), Expect = 7.6
Identities = 19/75 (25%), Positives = 28/75 (37%)
Frame = +1
Query: 100 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 279
+T + P LP P+P +T P + TRP PP + +P +
Sbjct: 904 TTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIP 963
Query: 280 PTQYPSTRVTPYRTP 324
TQ P + P P
Sbjct: 964 ATQVPPPPLPPLPPP 978
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 235 DAYSESTAWIATYMAGVLKVSNIICVIFSLLALGLR 128
D SE AT+ AG L + +IC+++ LLA R
Sbjct: 1839 DEESEMFRQAATWSAGALGILTVICLLYELLARSRR 1874
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 100 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSH 225
ST + P +P PT S P+THP T S P +H
Sbjct: 112 STPTTHPHIPHASTPTTHPHITHASTPTTHPHITHASTPTTH 153
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +1
Query: 100 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 279
ST + P + PT S P+THP T S P +H P + S P + Y
Sbjct: 124 STPTTHPHITHASTPTTHPHITHASTPTTHPHITHASTPTTH---PHIAHASTTHPYITY 180
Query: 280 ---PTQYP 294
PT +P
Sbjct: 181 ASTPTTHP 188
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 100 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSH 225
ST + P +P T S P+THP T S P +H
Sbjct: 182 STPTTHPHIPHASTTTTHPYIARASTPTTHPHITHASTPTTH 223
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 178 PSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTP 312
P+T PP P + PVV +P V PT+ PSTR P
Sbjct: 99 PTTVPPPVVTDAPTT-VPPPVVTDAPTTVPPPVQPTEPPSTRPPP 142
>SB_45713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 702
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/91 (21%), Positives = 40/91 (43%)
Frame = -1
Query: 274 PSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLLALGLRGASVSKTGCSS 95
P+P V P+ WIA ++ + +IC + L+AL +R S+ SS
Sbjct: 168 PAPRQVYCDEVWPEGPYSRVYWIAIFVIQYILPLGMICALAMLIALKVRRNSLKMIEKSS 227
Query: 94 GATRSSL*KV*CQIFSISSQLVTMPLVPNSC 2
+++ + Q I++ L+ + ++ C
Sbjct: 228 HVLAAAVRQRMKQTSKITNMLIALVILYAIC 258
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 129 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 257
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 1.9
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -1
Query: 280 DTPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLLALG--LRGASVSKT 107
+TPSP + P PDA TAW + L+ S + V S G LRGA K
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 106 G 104
G
Sbjct: 147 G 147
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 2.5
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +1
Query: 25 SSPTGTIWRRSGITPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT* 204
++PT T ++ TP+T S ++T + + P+TP P P+ P +
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTP---------KTPT--PTTST 90
Query: 205 LSRPCSHCT-RPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVA 351
L++P T P P + P PT + T+ TP +TP+ P A
Sbjct: 91 LTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTP-KTPTPTTPTPTA 139
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 18 RGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 152
R +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 137 RDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3)
Length = 736
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -1
Query: 280 DTPSPESSTIPVVRPDAYSESTAW---IATYM--AGVLKVSNIICVIFSLLALGLRGASV 116
+TP+P + P PDA TAW TY + L V+ C LRGA+
Sbjct: 90 ETPTPALESAPAAMPDA--TDTAWNRLSVTYFLESEALHVAADACRNGRRHMRTLRGANT 147
Query: 115 SKTGCS 98
K GC+
Sbjct: 148 GKRGCA 153
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 64 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT 201
T +T+ P +TQ + LPST +PT + + PST P T
Sbjct: 225 TTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQ-QTTTTLPSTKQPTT 269
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 64 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT 201
T +T+ P +TQ + +PST +PT + + PST P T
Sbjct: 209 TTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQ-QTTTTLPSTKQPTT 253
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 64 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT 201
T +T+ P +TQ + LPST +PT + + PST P T
Sbjct: 241 TTTTLPSTKQPTTTQQTTTTLPSTKQPTTPQ-LTTTTFPSTKQPTT 285
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 253 IPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLL 143
+ VV D Y + +ATY+ L VSN++ V+ +L
Sbjct: 27 VVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 144 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 293
NR + +++ E + ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_52691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 105 GAPRELHAAHCRRCDARSSPYRPSW 31
G R AA C++CDARS +P W
Sbjct: 3 GVLRVQLAARCKKCDARSD-IKPEW 26
>SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 94 PRSTQSCSPKLPSTPKPT 147
P+S +C+P PS PKP+
Sbjct: 1 PKSLHACAPPKPSVPKPS 18
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 5 GIRHEGHRHQLGRYG 49
G+ E +RHQLGRYG
Sbjct: 430 GMNTEAYRHQLGRYG 444
>SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = +1
Query: 178 PSTHPPCT*LSRPCSHCTR-----PVVPPVSCWIPAMVYPTQ 288
P P T L CSHC R P PP +PA YP Q
Sbjct: 828 PGITPAITALRERCSHCNRMTPPQPSAPPYPSTLPA--YPFQ 867
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.1 bits (57), Expect = 5.7
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -1
Query: 280 DTPSPESSTIPVVRPDAYSESTAW---IATYM--AGVLKVSNIICVIFSLLALGLRGASV 116
+TP+PE + P PDA TAW TY + L V+ C LRGA+
Sbjct: 154 ETPTPELESAPAAMPDA--TDTAWDRLSVTYFLESEALHVAADACRSGGRHVRILRGANT 211
Query: 115 SKTG 104
K G
Sbjct: 212 GKRG 215
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 99 PRELHAAH--CRRCDARSSPYRPSW*RCPSCRI 7
PR L H C+RC P R CPSCR+
Sbjct: 155 PRLLPCLHTFCKRCLENLVPPRSHTLSCPSCRL 187
>SB_58943| Best HMM Match : rve (HMM E-Value=6.1e-13)
Length = 1134
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = +1
Query: 178 PSTHPPCT*LSRPCSHCTR-----PVVPPVSCWIPAMVY 279
P P T L CSHC R P PP +PA ++
Sbjct: 732 PGITPAITALRERCSHCNRMTPSQPSAPPYPSTLPAYLF 770
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 27.1 bits (57), Expect = 5.7
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +1
Query: 139 KPTERR*HRLCSRPS--THPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPS-TRVT 309
+P++ LC RPS PC PC P V PV + V P + PS VT
Sbjct: 357 RPSKSVSDTLC-RPSEVAVTPCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPSEVAVT 415
Query: 310 PYRTP 324
P P
Sbjct: 416 PCVDP 420
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 280 DTPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLLALG--LRGASVSKT 107
+TPSP + P PDA TAW + L+ S + V G LRGA K
Sbjct: 565 ETPSPALESSPAAMPDA--TDTAWTCLIVTYYLE-SEALHVAAGARRSGRRLRGADAGKR 621
Query: 106 G 104
G
Sbjct: 622 G 622
>SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)
Length = 1033
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 183 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 320
NT AI V S S R T I + SG+ ++ TV I + A PH
Sbjct: 345 NTVGSKSAITRVYSPTGSVRPTKIFVKSGESLTLTVGIADLLASPH 390
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/91 (23%), Positives = 33/91 (36%)
Frame = -1
Query: 346 PAKSRRRMACGRA*PS*MGTVWDTPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNI 167
P S + + PS ++WD P+P S+ P A S T +N
Sbjct: 142 PKPSNKTVKQAAQTPSKPSSLWDAPTPTSAPPASAPPKAQSTQGMSSGTSEQPWFSPANT 201
Query: 166 ICVIFSLLALGLRGASVSKTGCSSGATRSSL 74
+ + LA L G ++ GA + L
Sbjct: 202 VTAFGAKLASSLFGPITNENSLFGGAQPTQL 232
>SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7)
Length = 326
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 97 RSTQSCSPKLPSTPKPTERR*HRLCS-RPSTHPP 195
R+ S S LP++ +PT R RL S RP PP
Sbjct: 153 RTGPSRSSDLPASSRPTSRASERLISTRPPASPP 186
>SB_12546| Best HMM Match : JTB (HMM E-Value=2.4)
Length = 159
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 164 DYVRDLQHTRHVRSYPGRALTVRVR 238
DY R Q R RS G LT+RVR
Sbjct: 85 DYTRHYQEIRGKRSLNGLTLTIRVR 109
>SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1007
Score = 26.6 bits (56), Expect = 7.6
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 214 PCSHCTRPVVPPVSCWIPAMVY 279
PC C +P ++ W+ A+V+
Sbjct: 561 PCGECNKPKTKCIASWLTALVF 582
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 26.6 bits (56), Expect = 7.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 208 SRPCSHCTRPVVPP 249
+ PCS CT+P +PP
Sbjct: 221 TEPCSLCTKPALPP 234
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 197 VRSYPGRALT-VRVRSYHRYRAGFRRWCIPHSTHLRG 304
+RSY T +++ S H Y + +CIP ++HL G
Sbjct: 2337 LRSYTCDNTTGLKICSTHWYGSECHTYCIPRASHLEG 2373
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 26.2 bits (55), Expect = 10.0
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 51 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 230
K+ T YN L V +PV + + + N + TQ+M T P Y + V + Y
Sbjct: 81 KLMVFTRYNPLMVFTRYNPVRYAQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLM-VFTRY 139
Query: 231 ASGRTTGIVL 260
R T +++
Sbjct: 140 NHVRYTQLMV 149
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 26.2 bits (55), Expect = 10.0
Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +1
Query: 118 PKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPA-MVYPTQYP 294
PK K + + C PP ++ PC+ P PPV PA M+ P P
Sbjct: 1342 PKANKVGKDKHNKGTKKCYGACAPPP---MADPCATMAAPCAPPVMMAAPAPMLAPMLAP 1398
Query: 295 STRVTPYRTPSC 330
P P C
Sbjct: 1399 MP--APCAPPEC 1408
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 26.2 bits (55), Expect = 10.0
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 130 STPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV--PPVSCWIPAMVYP--TQYPS 297
+TPKP + +P T PP T + P S T P V PPV+ P + P TQ P
Sbjct: 18 ATPKPPQPT----PPKPDTPPPGTNIPTPPSPNTPPPVTQPPVT--QPPVTQPPVTQPPV 71
Query: 298 TRVTPYRTPS 327
T+ P T S
Sbjct: 72 TQPPPPVTQS 81
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 26.2 bits (55), Expect = 10.0
Identities = 24/82 (29%), Positives = 29/82 (35%)
Frame = +1
Query: 4 RNSARGASSPTGTIWRRSGITPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPS 183
R+ RG P + TPST V T P P+P +R RL P+
Sbjct: 81 RSVNRGVGQPLN-LSSPPNSTPSTAQAVANNDPTLPTPPFSTPRPRPKAKRIRRLL--PT 137
Query: 184 THPPCT*LSRPCSHCTRPVVPP 249
PP S P P PP
Sbjct: 138 PPPPTPPQSTPKPRRVLPTPPP 159
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 26.2 bits (55), Expect = 10.0
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = -3
Query: 281 GYTIAGI---QHDTGGTTGRVQ*EHGLDSYVHGGCVEGLEHNLCHLLSVGFGVEGSFGEQ 111
GY +G Q GGT G + S HGG G + C L G G E+
Sbjct: 141 GYRSSGTNYGQSRAGGTGGNPGECNSAGSSYHGGVGAGWDGTGCTRLGPEHGERGGSIEK 200
Query: 110 DWV 102
WV
Sbjct: 201 GWV 203
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 214 PCSHCTRPVVPPVSCWIPAMVYPTQYP 294
PC T P PP + W P M P Q P
Sbjct: 236 PCFTKTEPPAPPSNYWSPPM-QPMQQP 261
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 214 PCSHCTRPVVPPVSCWIPAMVYPTQYP 294
PC T P PP + W P M P Q P
Sbjct: 170 PCFTKTEPPAPPSNYWSPPM-QPMQQP 195
>SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35)
Length = 681
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 197 VRSYPGRALT-VRVRSYHRYRAGFRRWCIPHSTHLRG 304
+RSY T +++ S H Y + +CIP ++HL G
Sbjct: 328 LRSYTCDNTTGLKICSTHWYGSECHTYCIPRASHLEG 364
>SB_653| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.2)
Length = 835
Score = 26.2 bits (55), Expect = 10.0
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +1
Query: 52 RSGITPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCT 231
+S ITPS++S S + P PK ++RR S+P+TH P + + T
Sbjct: 566 KSNITPSSIST-----SEEHKIAGKPPRPKSSKRR----TSKPTTHLPSSKQHDTVNDDT 616
Query: 232 RPVVPPVS 255
+P+ P S
Sbjct: 617 KPIPHPPS 624
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,108,979
Number of Sequences: 59808
Number of extensions: 363206
Number of successful extensions: 1235
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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