Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P14
         (403 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.3  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   2.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   9.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   9.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 81   LRVAPEEHPVLLTEAPLNPKANREKM 158
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength
          rhodopsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 83 QLIVEGVMPDLLHIV 39
          Q +V+ V PD+LH++
Sbjct: 23 QTVVDKVPPDMLHLI 37


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 279 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 377
           +H +  Y GY  P   +  D A  + T+  MK+
Sbjct: 187 NHQLISYAGYKNPDGTIIGDPANIEFTELCMKL 219


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = +1

Query: 250 VSCWIPAMVYPTQYPSTRVTP--YRTPSCVW 336
           V+CW+P  +     P   V P     P+  W
Sbjct: 316 VACWLPFFILYLATPFVPVEPPDILMPALTW 346


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 191 GCVEGLEHNLCHLLSVG 141
           G +EG++  L H L +G
Sbjct: 49  GDIEGIKEKLDHFLEMG 65


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 191 GCVEGLEHNLCHLLSVG 141
           G +EG++  L H L +G
Sbjct: 49  GDIEGIKEKLDHFLEMG 65


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 158 DTDYVRDLQHTRHVR 202
           D  Y R +Q  RH+R
Sbjct: 3   DCPYARCIQERRHIR 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,395
Number of Sequences: 438
Number of extensions: 3076
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)