Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P13
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.79 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   1.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.6  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.6  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.6  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   7.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   7.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 205 KIYVVATSVNTQDYLVFDY 149
           KI+++  SV    YL+FDY
Sbjct: 489 KIHLIVRSVFVTTYLMFDY 507


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 269 MCSREFNQSLCKTNLCREL*RQNIRRCNICE 177
           +C R F+QS   T   R    +   RC +C+
Sbjct: 54  VCDRRFSQSSSVTTHMRTHSGERPYRCRLCK 84


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 269 MCSREFNQSLCKTNLCREL*RQNIRRCNICE 177
           +C R F+QS   T   R    +   RC +C+
Sbjct: 310 VCDRRFSQSSSVTTHMRTHSGERPYRCRLCK 340


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 218 LCINSSCTKIG*IHDC 265
           LC N +C  IG  H C
Sbjct: 155 LCNNGTCEDIGNSHRC 170


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 344 TNAIGKGIA*MLFPPTKKKKDRVVNMCSREFNQ 246
           +  I KG   +LF  ++ K D+V   C+R+  +
Sbjct: 85  SGVISKGT--LLFMTSQLKPDKVTVFCNRDLGR 115


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 344 TNAIGKGIA*MLFPPTKKKKDRVVNMCSREFNQ 246
           +  I KG   +LF  ++ K D+V   C+R+  +
Sbjct: 85  SGVISKGT--LLFMTSQLKPDKVTVFCNRDLGR 115


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 344 TNAIGKGIA*MLFPPTKKKKDRVVNMCSREFNQ 246
           +  I KG   +LF  ++ K D+V   C+R+  +
Sbjct: 85  SGVISKGT--LLFMTSQLKPDKVTVFCNRDLGR 115


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 344 TNAIGKGIA*MLFPPTKKKKDRVVNMCSREFNQ 246
           +  I KG   +LF  ++ K D+V   C+R+  +
Sbjct: 85  SGVISKGT--LLFMTSQLKPDKVTVFCNRDLGR 115


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 176 IHRCCNDVYFDVT 214
           ++ CC + Y DVT
Sbjct: 190 VYACCPEPYVDVT 202


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 176 IHRCCNDVYFDVT 214
           ++ CC + Y DVT
Sbjct: 190 VYACCPEPYVDVT 202


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 176 IHRCCNDVYFDVT 214
           ++ CC + Y DVT
Sbjct: 190 VYACCPEPYVDVT 202


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 176 IHRCCNDVYFDVT 214
           ++ CC + Y DVT
Sbjct: 190 VYACCPEPYVDVT 202


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 176 IHRCCNDVYFDVT 214
           ++ CC + Y DVT
Sbjct: 190 VYACCPEPYVDVT 202


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 306 EKHLRNTLTYCISETGVPQCNR 371
           EK +  TLT C S    P  N+
Sbjct: 123 EKDMETTLTPCASPNRKPDDNQ 144


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 346 RPESPNAIGKGAR 384
           RP+ P  IGKG++
Sbjct: 12  RPQEPVFIGKGSK 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,074
Number of Sequences: 336
Number of extensions: 2048
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)