Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P13
(384 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49310| Best HMM Match : Piwi (HMM E-Value=4.9e-33) 29 1.3
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 29 1.7
SB_57682| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_56025| Best HMM Match : Keratin_B2 (HMM E-Value=0.4) 27 6.9
SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_34881| Best HMM Match : DUF1118 (HMM E-Value=2.8) 27 6.9
SB_13855| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_26502| Best HMM Match : Band_41 (HMM E-Value=1.4e-16) 26 9.2
SB_17388| Best HMM Match : rve (HMM E-Value=8.2e-17) 26 9.2
SB_51816| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-24) 26 9.2
SB_49425| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
>SB_49310| Best HMM Match : Piwi (HMM E-Value=4.9e-33)
Length = 952
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 157 ILNSPGYSQMLQRRIF*RYNSLHKFVLHKDWLNSRLHIFTTR 282
+ NSP + Q+L I RYN+ +L DW + L FT R
Sbjct: 480 LANSPSFGQVLNT-IMARYNNKTYKILEIDWDKNPLSTFTLR 520
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 97 EVLTVWQIFILKVCISKHNQILNSP 171
EVLT +IFI + H QILN+P
Sbjct: 25 EVLTFAEIFIAAFIFAPHRQILNTP 49
>SB_57682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 16 ERAQRFIFKVMFKRSYRYPTAEVCKESEVLTVWQIFILKVCISKH 150
E A+RF V+ + +Y TA E W++ L CI+ H
Sbjct: 136 ECAKRFANAVLRRPTYLRKTASALPEQTATACWRLIHLLQCIAIH 180
>SB_56025| Best HMM Match : Keratin_B2 (HMM E-Value=0.4)
Length = 187
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 268 CAVVNLTNLCARRIYAESCNVKIYVVATS 182
CA + N R+YA+SC + Y A +
Sbjct: 35 CATFSFANTTGFRVYAKSCTYESYCTANN 63
>SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 311 LFPPTKKKKDRVVNMCSREFNQSLCKTNLCREL*RQNIR 195
++P K + + M ++ F+Q L T+ CRE R+ +R
Sbjct: 248 VYPDIKSVRVTIDGMPNKVFSQGLRPTDFCREAKRRFVR 286
>SB_34881| Best HMM Match : DUF1118 (HMM E-Value=2.8)
Length = 382
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 311 LFPPTKKKKDRVVNMCSREFNQSLCKTNLCREL*RQNIR 195
++P K + + M ++ F+Q L T+ CRE R+ +R
Sbjct: 51 VYPDIKSVRVTIDGMPNKVFSQGLRPTDFCREAKRRFVR 89
>SB_13855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 200 YFDVTTLCINSSCTKIG*IHDC--TYLQHGPFFFLSGGKAFTQYPY 331
YF V T +NS+C K+G ++ T + F G +T YPY
Sbjct: 69 YFSVITGPMNSACCKMGDVNQSGRTIKKSCNLNFTRGPDQWTCYPY 114
>SB_26502| Best HMM Match : Band_41 (HMM E-Value=1.4e-16)
Length = 573
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 179 EYPGLFSI*LCLLIHTLSIKICQTVRTSLSLQTSAVGYL*DLLNITL 39
++ L S L LL + SI+IC ++ LS T+ +G L+N+ L
Sbjct: 75 KHRNLLSRTLDLLSRSRSIRICHSIMLLLSYITTHIGDGDKLINVVL 121
>SB_17388| Best HMM Match : rve (HMM E-Value=8.2e-17)
Length = 441
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +1
Query: 4 RGKTERAQRFIFKVMFKRSYRYPTAEVCKESEVLTVWQIFILKVCISKH 150
R E +RF V+ +Y TA E W++ L CI H
Sbjct: 100 RADRECVKRFANVVLRGPTYLRKTASALPEQTATACWRLIHLSQCIETH 148
>SB_51816| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-24)
Length = 384
Score = 26.2 bits (55), Expect = 9.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 319 RKCFSPRQKKKRTVL*ICAVVNLTNLCARRIYAESCNVKIYVVATSV 179
+K F + KK + CA+ N + A ++YA+S +YV+ TS+
Sbjct: 207 KKIFRVTRDKKHRIC-PCAMSNAQKI-AIQVYAKSAYTSMYVIITSL 251
>SB_49425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2
Query: 275 VNMCSREFNQSLCKTNLCREL*RQNIRRCNICEYPGLFSI*LCLLIHTLSIKIC-QTVR 102
V++C++ +C CR + + C C + ++ C L H++ + +C Q VR
Sbjct: 361 VSLCAQCMRVVMCTVYACRYVHSVCVSLCAQCVRVVMCTVCACRLGHSVCVSLCAQCVR 419
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 268 CAVVNLTNLCARRIYAESCNVKIYVVATSVNTQDYLVFDYV 146
C V L+ C RR+ C ++ V SV ++F +V
Sbjct: 184 CCVCRLSRCCVRRLSRSCCVRRLAAVVVSVILATVVMFVFV 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,345,599
Number of Sequences: 59808
Number of extensions: 249313
Number of successful extensions: 517
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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