Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P12
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 52 1e-07
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 47 6e-06
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 46 1e-05
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 44 3e-05
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 44 4e-05
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 43 8e-05
03_01_0249 - 1935355-1935827,1936129-1936330 43 1e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 42 1e-04
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 42 2e-04
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 42 2e-04
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 42 2e-04
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 41 3e-04
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 40 7e-04
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 38 0.002
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 37 0.007
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 36 0.009
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 35 0.021
05_04_0304 - 20048518-20049003,20049074-20049412 34 0.036
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 34 0.036
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 34 0.048
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 34 0.048
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 31 0.25
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 29 1.0
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 29 1.8
07_03_0849 + 21997758-21998423 28 2.4
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 28 3.1
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 28 3.1
01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093 28 3.1
06_02_0068 + 11107493-11107653,11109116-11109218,11109311-111094... 27 5.5
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 27 7.2
05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390 26 9.6
04_04_0949 - 29597934-29598362 26 9.6
04_04_0948 - 29592554-29592776,29594494-29594693 26 9.6
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 329
GEH PEF+K+NP VP LVD I +S AI YL +KY + L P+D + +AL
Sbjct: 49 GEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPE-HPLLPQDLKMKAL 104
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 335
GEH P+ L NP VP L D L +WESRAI Y+ K K L D + A+VD
Sbjct: 39 GEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK-NKPELLKDGDLKESAMVD 96
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALV 332
GE PE ++ NP +P L D L ++ESRAI Y++ KY K L D R ALV
Sbjct: 39 GEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALV 98
Query: 333 D 335
D
Sbjct: 99 D 99
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 165 HLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-GKGSSLYPEDA 314
H +P FL LNP +P L D ++ESRAI Y+ KY +G+ L P +A
Sbjct: 45 HKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADLLPAEA 95
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 44.0 bits (99), Expect = 4e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +3
Query: 174 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRL 344
P++ K+NP VP LVD +I +S AII YL +KY + L P+D + +AL Q L
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQ-HPLLPQDLKKKALNMQGL 99
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 281
G+H +PE L NP +P L D L++++SRAI Y+ KY
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 281
GEH P FLKL P VP D +++ESRAI Y+ ++Y
Sbjct: 40 GEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQY 80
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 335
GEH +P + NP VP D L+++ESRAI Y++ K+G L + A+VD
Sbjct: 39 GEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHG-SDLLRESNLSESAMVD 96
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 174 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 329
P++ K+NP +P LVD L + +S AI YL +KY + +L P+D + +AL
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKYPQ-HALLPKDLKKKAL 92
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 162 EHLKPEFLKLNPQHTVPTLVD-DGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 329
E PEF KLNP VP LVD D + +S AI+ YL + Y + L P+D + +AL
Sbjct: 62 EQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTYPQ-HPLLPQDPKMKAL 117
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 162 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 335
EH PE LK NP +P D L ++ESRAI Y++ KY + L + R A+VD
Sbjct: 40 EHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVD 99
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 41.1 bits (92), Expect = 3e-04
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 162 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 335
EH PE LK NP +P D L ++ESRA+ Y++ KY + + L + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTEAAMVD 99
Query: 336 QRLYFDIGTLYQRFGDYFY 392
+ +I Y Y
Sbjct: 100 IGIEVEIHQYYPVISSIVY 118
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 39.9 bits (89), Expect = 7e-04
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 153 HHGEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGK--GSSLYPEDARARA 326
+ G P++LKL P T DD L++ ESR I+ ++ +KY + L A RA
Sbjct: 39 YRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYARQGNPDLIGTGALERA 98
Query: 327 LVDQRL 344
++Q L
Sbjct: 99 SIEQWL 104
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +3
Query: 156 HGEHLKPEFLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYGKGS 293
+G +P+ L++ + P +VD G++++ES AII YL +KYG G+
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYGDGT 225
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 162 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNK 278
EH PE NP VP L D L ++ESRAI Y++ K
Sbjct: 39 EHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 36.3 bits (80), Expect = 0.009
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 174 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFD 353
PEFLK+NP +P L +++ES AI Y V + SSL + ++Q + F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARY-VARLKDNSSLCGSSLIDYSHIEQWMDFS 125
Query: 354 IGTLYQRFGDYFYP 395
+ G + YP
Sbjct: 126 ATEVDANIGRWLYP 139
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 35.1 bits (77), Expect = 0.021
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 162 EHLKPEFLKLNPQHTVPTLVDDGLSIWE 245
EHL PEF K+NP VP +VD ++E
Sbjct: 41 EHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 34.3 bits (75), Expect = 0.036
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARAL 329
L+LNP H VP LV G + ES I+ YL + + + L P D RAL
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRAL 102
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 34.3 bits (75), Expect = 0.036
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 174 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLY 347
PE+LK+NP VP L ++ES AI Y+++ SS +PE R+++ D LY
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYVLS-----SSHFPEVTRSKS--DNPLY 654
Score = 32.7 bits (71), Expect = 0.11
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 174 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLY 347
PEFLK+NP +P L ++ES AI Y+++ +PE R++A D LY
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYVLS-----HCHFPEVTRSKA--DNPLY 93
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 33.9 bits (74), Expect = 0.048
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 281
G P++LKL P T D +++ ESR II ++ +KY
Sbjct: 40 GSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKY 80
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 33.9 bits (74), Expect = 0.048
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 159 GEHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVD 335
GE+ L +P +P D ++++ESRAI Y++ Y K L + A+VD
Sbjct: 38 GENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVD 96
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 183 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPED 311
L NP H VP L+ +G I ESR I+ Y++++ G++L P D
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDEVFPVDGAALLPAD 112
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 365 EGTNVKVQALIDERPRSSVFWVEAAAFTVLVDQ 267
EG N VQAL +ER W + AA VD+
Sbjct: 521 EGLNANVQALAEERAALEAEWAQLAADRARVDE 553
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 162 EHLKPEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--GKGSSLYPEDARARALVD 335
EH PEF+KL T ++ +SRAI YL ++ ++Y + RA ++
Sbjct: 41 EHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQFPDDGNRTIYGTGSLERASIE 100
Query: 336 QRL 344
Q L
Sbjct: 101 QWL 103
>07_03_0849 + 21997758-21998423
Length = 221
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 268 WSTSTVKAAASTQKTLERGR-SSISACTLTLVPSTRDSEITSI 393
WS+S+V ++++ +L+ R SS S+ T T P +R ++S+
Sbjct: 73 WSSSSVPWSSTSALSLDSARSSSSSSSTTTTAPCSRSRSLSSL 115
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 241 GSRAPSSLTWSTSTVKAAASTQKTLERGRSSISACTL 351
G R+ SSL S+S+ AAA++++ L G++S A L
Sbjct: 25 GVRSLSSLQPSSSSSAAAAASEEVLVEGKASARAAVL 61
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 14 RVPVSYLKKQNNDD*FVLRSRVGALQSCSTHS*GAKPQSQ-LKVGRSPPRGAPET*ISEV 190
R+P S LKK N D + S GAL++ ST KP S ++ + PP + +V
Sbjct: 324 RLPASALKKDNAPDVAMKESSDGALETQST-----KPSSDGQQINKEPPSVVEDNKQEDV 378
Query: 191 E 193
E
Sbjct: 379 E 379
>01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093
Length = 324
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 247 RAPSSLTWSTSTVKAAASTQKTLERGRSSIS 339
R PSS W T + AA +T++ L GR SIS
Sbjct: 137 RKPSSSCWRTVVIMAATTTRRRL-AGRWSIS 166
>06_02_0068 + 11107493-11107653,11109116-11109218,11109311-11109423,
11109502-11109624,11110165-11110266,11110367-11110532,
11111215-11111331,11111438-11111478,11111735-11111836,
11111924-11112140,11112271-11112498,11112580-11112707,
11112804-11112921,11113020-11113235,11113314-11113463,
11113553-11113629,11113973-11114190,11114443-11114656,
11114744-11114823,11114898-11115015,11115092-11115262,
11116124-11116292,11116404-11116447,11116620-11116662,
11116743-11116888,11118337-11118431,11118579-11119477,
11120540-11120638,11120907-11121002,11123447-11123568,
11123675-11123767,11123922-11124114
Length = 1653
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 298 STQKTLERGRSSISACTLTLVPSTRDSE 381
S K L+R S IS C LTL + RDS+
Sbjct: 993 SLTKLLKRWPSLISNCVLTLTDNLRDSK 1020
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 247 RAPSSLTWSTSTVKAAASTQKTLERGRSSISACTLTLVPSTRDSEITS 390
+ PSS + S+ +ST T ER +S AC L PS+ ++S
Sbjct: 459 KVPSSGEYVNSSQGPGSSTSSTSERIAASSVACAPGLSPSSSMGSLSS 506
>05_03_0260 - 11200887-11200907,11200979-11201961,11212201-11212390
Length = 397
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 344 QALIDERPRSSVFWVEAAA 288
+A++DE S VFWVEA +
Sbjct: 136 RAMLDEYKTSDVFWVEAVS 154
>04_04_0949 - 29597934-29598362
Length = 142
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 316 ERGRSSISACTLTLVPSTRDSEI 384
E GR ++ AC L P RDS+I
Sbjct: 56 ETGRHALDACALCTKPLRRDSDI 78
>04_04_0948 - 29592554-29592776,29594494-29594693
Length = 140
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 316 ERGRSSISACTLTLVPSTRDSEI 384
E+GR ++ AC L TRDS+I
Sbjct: 18 EQGRHALDACALCTKQLTRDSDI 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,831,287
Number of Sequences: 37544
Number of extensions: 172502
Number of successful extensions: 462
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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