Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P11
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...   112   2e-27
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.56 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.2  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score =  112 bits (269), Expect = 2e-27
 Identities = 52/55 (94%), Positives = 54/55 (98%)
 Frame = +1

Query: 10  QDVYKIGGIGTVPVGRVETGILKPGIVVVFAPANITTEVKSVEMHHEALQEAVPG 174
           QDVYKIGGIGTVPVGRVETG+LKPG+VVVFAPANITTEVKSVEMHHEAL EAVPG
Sbjct: 2   QDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPANITTEVKSVEMHHEALPEAVPG 56


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 146 TRLYKKLYPVTMLV 187
           T+LY+KLYPV M +
Sbjct: 28  TKLYQKLYPVLMFL 41


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 471 GSLQAPVCG---VLPGIPSPRSFRR 536
           GS  +P  G   + P +PSPRS RR
Sbjct: 260 GSAPSPTAGAGGLPPQVPSPRSQRR 284


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 406 TGKSTEDNPKSIKSGDAAIVNLVPSKRLC 492
           TGK  +    S K  DAA+  +VP K+LC
Sbjct: 130 TGKVCDVEMVSCK--DAALRKVVPLKKLC 156


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 61  ETGILKPGIVVVFAPANITTEVKS 132
           ETG ++PG++    P   T EV++
Sbjct: 96  ETGSIRPGVIGGSKPRVATPEVEN 119


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 508  PGRTPHTGAWREP 470
            PG  P T +W++P
Sbjct: 1157 PGHKPSTSSWQKP 1169



 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 31   GIGTVPVGRVETGILKPGIVVVFAPANITTEV 126
            G+G +P         KP   V  AP  +TT V
Sbjct: 990  GLGLIPDNPSREDCTKPPEPVTPAPPQVTTGV 1021


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 278 KSAAPLGGLFFESP 237
           K+ +P GG  FE+P
Sbjct: 396 KAPSPYGGQMFEAP 409


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 233 LQEIRKTTHPGE 268
           L+E  +TTHP E
Sbjct: 346 LEEYTRTTHPNE 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.135    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,359
Number of Sequences: 336
Number of extensions: 3420
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)