Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P10
(482 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 227 8e-59
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 214 8e-55
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 148 7e-35
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 128 5e-29
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 113 2e-24
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 106 2e-22
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 106 3e-22
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 103 3e-21
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 98 1e-19
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 97 1e-19
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 97 2e-19
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 94 1e-18
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 93 4e-18
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 92 7e-18
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 92 7e-18
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 79 7e-14
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 78 1e-13
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 75 8e-13
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 65 7e-10
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 65 9e-10
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 60 2e-08
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 54 1e-06
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 49 5e-05
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 37 0.27
UniRef50_Q0UU07 Cluster: Putative uncharacterized protein; n=1; ... 36 0.48
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 36 0.63
UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus o... 34 1.9
UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta hyd... 34 1.9
UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probab... 33 2.6
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 2.6
UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila pseudoobscu... 33 2.6
UniRef50_UPI000049A3BC Cluster: Sec7 domain protein; n=1; Entamo... 33 3.4
UniRef50_UPI0000494D12 Cluster: PREDICTED: hypothetical protein;... 33 3.4
UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus laev... 33 4.5
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 33 4.5
UniRef50_A6CG73 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_UPI00005845E4 Cluster: PREDICTED: similar to Rtf1, Paf1... 32 5.9
UniRef50_Q9SFE9 Cluster: T26F17.9; n=13; Magnoliophyta|Rep: T26F... 32 5.9
UniRef50_UPI0001555F2B Cluster: PREDICTED: hypothetical protein;... 32 7.8
UniRef50_Q04DS5 Cluster: ABC-type cobalt transport system, ATPas... 32 7.8
UniRef50_A1ZBC4 Cluster: CG18604-PA; n=5; Sophophora|Rep: CG1860... 32 7.8
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 32 7.8
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 227 bits (556), Expect = 8e-59
Identities = 106/121 (87%), Positives = 116/121 (95%)
Frame = -3
Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
SLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTE
Sbjct: 2 SLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTE 61
Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
EEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62 EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121
Query: 120 G 118
G
Sbjct: 122 G 122
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 214 bits (523), Expect = 8e-55
Identities = 95/121 (78%), Positives = 114/121 (94%)
Frame = -3
Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
SLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE
Sbjct: 2 SLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTE 61
Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHR
Sbjct: 62 DEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHR 121
Query: 120 G 118
G
Sbjct: 122 G 122
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 148 bits (358), Expect = 7e-35
Identities = 71/121 (58%), Positives = 97/121 (80%)
Frame = -3
Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
SLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE TE
Sbjct: 2 SLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELTE 61
Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
++VE+++TIM NPRQY+IP QK + DG+ SQ+ ++ LD+KLRE+LERLKKIRAHR
Sbjct: 62 DKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAHR 115
Query: 120 G 118
G
Sbjct: 116 G 116
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 128 bits (310), Expect = 5e-29
Identities = 59/114 (51%), Positives = 82/114 (71%)
Frame = -3
Query: 459 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIV 280
F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG TE++ KI
Sbjct: 11 FKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKIT 70
Query: 279 TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
++++P + IP W LNR D DGK Q+ S+ LD+K+REDLERLKKI++HRG
Sbjct: 71 DLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRG 124
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 113 bits (272), Expect = 2e-24
Identities = 52/121 (42%), Positives = 78/121 (64%)
Frame = -3
Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
E + ++ ++ +P + IP W LNR D GK + + + S R DLERL+K R R
Sbjct: 63 AEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCER 122
Query: 120 G 118
G
Sbjct: 123 G 123
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 106 bits (255), Expect = 2e-22
Identities = 46/117 (39%), Positives = 82/117 (70%)
Frame = -3
Query: 468 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 289
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T +E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 288 KIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
IV+I+ NP +++IP W LNR+ D G+ + +++L + +R ++ER+KK+R RG
Sbjct: 68 LIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRG 124
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 106 bits (254), Expect = 3e-22
Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 468 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 289
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E+E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 288 KIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKK---IRAHR 121
+I + +P IP+ ++N Q+DI+DG S L + LD+ LR +ER KK IRA+R
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYR 125
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 103 bits (246), Expect = 3e-21
Identities = 48/124 (38%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = -3
Query: 462 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 283
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TEEEV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 282 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG-RSLL 106
++++P ++ IP W NR+KD V G+ + S+L +ED+ RLK+IR +RG R L
Sbjct: 65 EEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHEL 124
Query: 105 GSAC 94
G C
Sbjct: 125 GLPC 128
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 97.9 bits (233), Expect = 1e-19
Identities = 40/114 (35%), Positives = 80/114 (70%)
Frame = -3
Query: 459 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIV 280
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE EE++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLR 87
Query: 279 TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
+ ++Y +P+W LN +++ V GK L S++L+ +++ED+ +KKIR+++G
Sbjct: 88 EYV-EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKG 140
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 97.5 bits (232), Expect = 1e-19
Identities = 47/112 (41%), Positives = 78/112 (69%)
Frame = -3
Query: 465 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 286
D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE T+EE K
Sbjct: 9 DQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHK 68
Query: 285 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 130
I ++ QY +D+ +GK ++T++ L++KLREDLER+KKI+
Sbjct: 69 ITEVIKMVPQY---------IRDLKNGKNYEVTTNELETKLREDLERIKKIK 111
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 97.1 bits (231), Expect = 2e-19
Identities = 45/116 (38%), Positives = 71/116 (61%)
Frame = -3
Query: 465 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 286
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G EEEV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 285 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
+ T + +P W LNRQKD+ G+ L +++ RED+ LKK+RA+RG
Sbjct: 78 LDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRG 132
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 94.3 bits (224), Expect = 1e-18
Identities = 43/116 (37%), Positives = 74/116 (63%)
Frame = -3
Query: 465 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 286
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G E+V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 285 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
+ ++ N + +P W LNR++DI G+ L +L ++ED+ +KKIR+++G
Sbjct: 127 LRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKG 181
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 92.7 bits (220), Expect = 4e-18
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -3
Query: 387 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIP 244
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+VTI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 91.9 bits (218), Expect = 7e-18
Identities = 42/121 (34%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Frame = -3
Query: 462 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 283
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++E+++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 282 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG-RSLL 106
+++ + ++P+W NR+KD G L +S+L +R D+ER KKI++ RG R L
Sbjct: 66 ENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSL 125
Query: 105 G 103
G
Sbjct: 126 G 126
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 91.9 bits (218), Expect = 7e-18
Identities = 38/115 (33%), Positives = 73/115 (63%)
Frame = -3
Query: 462 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 283
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG +E+V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 282 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
+++ +P + IP W NR+KD+ G L ++L ++ED+ +KKIR ++G
Sbjct: 65 ESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKG 119
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 78.6 bits (185), Expect = 7e-14
Identities = 36/116 (31%), Positives = 68/116 (58%)
Frame = -3
Query: 465 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 286
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ ++ +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 285 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
+V + N +P+W N QKD G+ + T ++L R+D+ R+K I ++RG
Sbjct: 78 VVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRG 132
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 77.8 bits (183), Expect = 1e-13
Identities = 35/121 (28%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Frame = -3
Query: 462 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 283
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+E+V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 282 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG-RSLL 106
++ +P P WFLNR+KD+ G+ + +S+++ +R D+ER + + +G R +
Sbjct: 110 EKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMF 169
Query: 105 G 103
G
Sbjct: 170 G 170
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 74.9 bits (176), Expect = 8e-13
Identities = 37/116 (31%), Positives = 64/116 (55%)
Frame = -3
Query: 465 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 286
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 285 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
+V I + P W +NR+ D + G + S+ LDS L+ED++RL I+ ++G
Sbjct: 73 VVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKG 128
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 65.3 bits (152), Expect = 7e-10
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = -3
Query: 450 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 271
I+R+ +T+++G ++V +A+ I+G+G + + K ID G EE++ K+ +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 270 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG-RSLLG 103
N + P WFLNR+KD G+ L S L + D++ +KK+++ +G R LG
Sbjct: 68 RNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLG 123
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 64.9 bits (151), Expect = 9e-10
Identities = 31/111 (27%), Positives = 59/111 (53%)
Frame = -3
Query: 450 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 271
I+ I + ++DG + + + + GV +++ V ID ++ G ++EE+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 270 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
NP +Y IP W NR++D GK L ++ + D++R +I + RG
Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRG 123
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -3
Query: 273 MSNPRQYKIPDWFLNRQKDIVDGKYSQL 190
M NPRQYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 228 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 118
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRG 115
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = -3
Query: 444 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 283
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+EE+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI 56
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 36.7 bits (81), Expect = 0.27
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 366 YSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDG 205
Y N + D + DK + E ++E E+++T++ + KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_Q0UU07 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 207
Score = 35.9 bits (79), Expect = 0.48
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +3
Query: 57 TSSACGLSVLTTDTQTPVVTYPYEHGSSSAFPNLHEAWSLNWKKSTGCICHQQ 215
T S L+ L TP + YPY S + +AW LN K IC QQ
Sbjct: 6 TFSIAALASLAAAQDTPQLNYPYTIDPDSVSSSDRDAWCLNQKSQCPLICLQQ 58
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 35.5 bits (78), Expect = 0.63
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -3
Query: 426 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEEEVEK 286
+D K KV A G+GR +S +LK K I DLD AGE T EE+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus oeni
ATCC BAA-1163|Rep: Rhamnosyltransferase - Oenococcus
oeni ATCC BAA-1163
Length = 311
Score = 33.9 bits (74), Expect = 1.9
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = -3
Query: 456 QHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVT 277
QH ++ T + K +F + I + Y N + KK +L K GEC +E +
Sbjct: 215 QHSSNVVGTTGNNLFKKIFKIREI--FNKFYKNGLFKKQANELLKNYGECLSKEKRNAIN 272
Query: 276 I-MSNPRQYKIPDWFLNRQK 220
I +S+ RQ K W L + K
Sbjct: 273 IFLSSNRQLKEVFWILKKIK 292
>UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta
hydrolase superfamily; n=2; Cryptosporidium|Rep:
COG1752: esterase of the alpha-beta hydrolase
superfamily - Cryptosporidium hominis
Length = 794
Score = 33.9 bits (74), Expect = 1.9
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = -3
Query: 465 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 286
+ F +L+ +N +I K + + + SN K DK+ + E
Sbjct: 645 NSFVVVLKSLNDDIQRLNKTLITIDSFLKSSNNISNKATKLLKYIEDKQKKGIFSAKFED 704
Query: 285 IVTIMSNPRQYK-----IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKI 133
++T++S Y I +N ++ IVD K+SQL + + LRE E K+
Sbjct: 705 VITLLSLYEDYVEKLQGIRIKEINSRRIIVDSKHSQLILARIIIALREQNEHFPKL 760
>UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Parabacteroides
distasonis ATCC 8503|Rep: Putative outer membrane
protein, probably involved in nutrient binding -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 531
Score = 33.5 bits (73), Expect = 2.6
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 369 RYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDW 238
RYS ++ KA+ + K G+ T+E V+ I ++ R +K DW
Sbjct: 410 RYSEVIYNKAEALMRKNGGKATQEVVDMINSV--RQRSFKAEDW 451
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 2.6
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = -3
Query: 468 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 337
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila
pseudoobscura|Rep: GA15861-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 354
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 294 VEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGR 115
++ I ++ + ++ I WF+N K + + K + N SKL + E+LK + HR +
Sbjct: 185 MKSIEVLICDEEEFSI--WFMNNLKHLKNLKQLTIRGKNYPSKLLDIAEKLKAVGRHRLK 242
Query: 114 SL-LGSAC 94
L + +AC
Sbjct: 243 QLEVHNAC 250
>UniRef50_UPI000049A3BC Cluster: Sec7 domain protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: Sec7 domain protein -
Entamoeba histolytica HM-1:IMSS
Length = 1396
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 294 VEKIVTIMSNPRQYKIPDWFLNRQKDI-VDGKYSQLTSSNLDSKLREDLER 145
V +VT+++ +Y DW L + D KY +TS N S++R D+E+
Sbjct: 186 VPPVVTLLTTSAKYSTDDWCLPDAVHVKSDNKY--MTSVNFSSRIRSDIEK 234
>UniRef50_UPI0000494D12 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 157
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 355 CVEKGGYRS*QACRRMH*RRS*KNCYNHVKPQA-IQNTRLVSQQTKGYC*W 206
C ++ G R Q C R++ R +NC H++P + + R SQ T G W
Sbjct: 30 CAKERGVRGTQPCPRIYLRLPAQNCLGHLRPSSQAASDRPKSQPTSGELCW 80
>UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus
laevis|Rep: LOC100037042 protein - Xenopus laevis
(African clawed frog)
Length = 384
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 282 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLK 139
V I ++ KIPD LN + V +S+ + N +S+L+ D +R+K
Sbjct: 6 VGIHKEEQEQKIPDPLLNGDAEDVPQHFSETPTCNTESRLQADQQRIK 53
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 32.7 bits (71), Expect = 4.5
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 378 VGRRYSNIVLKKADIDLDKRAGECTEEEVE----KIVTIMSNPRQYKIPDWFLNRQKDIV 211
V +RY+ I+LKK DID K E +++ K+ ++ P Q + LN+ +D +
Sbjct: 148 VTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAIPNQLEDKQIELNKAQDEI 207
Query: 210 DGKYSQLTSSNLD 172
K + L +NLD
Sbjct: 208 KAKENSL-KNNLD 219
>UniRef50_A6CG73 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 562
Score = 32.7 bits (71), Expect = 4.5
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = -3
Query: 429 NIDGKRKVMFAMTAIKGVGRRYSN-IVLKKADIDLDKRAGECTEEEVEKIVTIMSNPR-- 259
N GK K++ + GR + N ++L+ D + E EE++ + I+ PR
Sbjct: 32 NNSGKSKILKEIRRFCSEGRSHPNDLILEHLTFDQNNTPDEIPEEQIHLLKNIIQQPRDH 91
Query: 258 QYKIPDWFL----NRQKDIVDGK-YSQLTSSNLDS 169
++ IP + +++K + + K +S + N+DS
Sbjct: 92 EHTIPGYIYVGDKSKRKHVDERKLFSAFSKPNIDS 126
>UniRef50_UPI00005845E4 Cluster: PREDICTED: similar to Rtf1,
Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae); n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Rtf1, Paf1/RNA polymerase II
complex component, homolog (S. cerevisiae) -
Strongylocentrotus purpuratus
Length = 690
Score = 32.3 bits (70), Expect = 5.9
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = -3
Query: 303 EEEVEKIV----TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKK 136
EE++EKIV NPR Y + L + +D+ + ++ T+ L KL + ER ++
Sbjct: 460 EEDIEKIVHEKERFRKNPRNYAMTKTKLRKSRDLALMEGNEETAKGLSQKLTDLEERAQE 519
Query: 135 IRAHRGRSL 109
+ R R +
Sbjct: 520 LDRIRNREV 528
>UniRef50_Q9SFE9 Cluster: T26F17.9; n=13; Magnoliophyta|Rep:
T26F17.9 - Arabidopsis thaliana (Mouse-ear cress)
Length = 341
Score = 32.3 bits (70), Expect = 5.9
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 206 PSTISFCLLRNQSGIL-YCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYRRP-T 379
PS S ++ SG+L +CL F + I ST++ + A + A F + + +R P +
Sbjct: 226 PSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPIS 285
Query: 380 PLIAVIANITL 412
P+ AV ITL
Sbjct: 286 PMNAVGCGITL 296
>UniRef50_UPI0001555F2B Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 770
Score = 31.9 bits (69), Expect = 7.8
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = -3
Query: 375 GRRYSNIVLKKADIDLDKRAGECTEEEVEKI-VTIMSNPRQYKIPDWFLNRQKDIVDGKY 199
GR + + D +LD+ TE + ++ + IPDW ++ + D+ GK
Sbjct: 15 GRPCERVAGSEDDSELDRFINLITERKKTYCPASLRQLASELNIPDWIVSLRHDLTHGKL 74
Query: 198 SQLTSSNLDSKLREDLERLKKIRAHRGRSLLGSACPWSTH*DHR 67
QL++ SK D R G +L+ S W + D +
Sbjct: 75 PQLSTCRKGSKAALDWLRRTYWCRQLGNNLVES---WDSELDEK 115
>UniRef50_Q04DS5 Cluster: ABC-type cobalt transport system, ATPase
component; n=1; Oenococcus oeni PSU-1|Rep: ABC-type
cobalt transport system, ATPase component - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 562
Score = 31.9 bits (69), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 263 GFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYRRPTP--LIAVIANITLRLPSMFVF 436
GFD+ + T S + +S+ IS + NT + ++P P LI I N+ P VF
Sbjct: 256 GFDLSLEKHLTDLSSLNQELVSKKISNWLNTQISVKKPNPGQLILSIKNLFFSYPKQSVF 315
>UniRef50_A1ZBC4 Cluster: CG18604-PA; n=5; Sophophora|Rep:
CG18604-PA - Drosophila melanogaster (Fruit fly)
Length = 766
Score = 31.9 bits (69), Expect = 7.8
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 21 FNLLLLGHTNSSTSSACGLSVLTTDTQTPVVTYPYEHGSSSAFPNLHEAWSLNWKKSTGC 200
F+ + LG +NS++SS C V +T PY G++ LH+ STGC
Sbjct: 288 FSSINLGASNSNSSSGCQSPVFSTSFSGSCSPNPYLPGAAGGSSPLHQITKGISGLSTGC 347
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 31.9 bits (69), Expect = 7.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -3
Query: 366 YSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQK 220
Y + +K ++D K C ++E+EK + SNP + W + +K
Sbjct: 533 YMKVQGQKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,368,816
Number of Sequences: 1657284
Number of extensions: 7745335
Number of successful extensions: 23966
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 23371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23953
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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