Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P10
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   227   5e-60
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   227   5e-60
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   227   5e-60
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   227   5e-60
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   224   4e-59
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    93   2e-19
AE013599-2749|AAF57651.3|  766|Drosophila melanogaster CG18604-P...    32   0.47 
AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p pro...    30   1.9  
AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA...    30   1.9  
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB...    28   5.8  
AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p pro...    28   7.7  
AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p pro...    28   7.7  
AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA...    28   7.7  
AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-P...    28   7.7  
AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-P...    28   7.7  
AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-P...    28   7.7  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  227 bits (556), Expect = 5e-60
 Identities = 106/121 (87%), Positives = 116/121 (95%)
 Frame = -3

Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
           SLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTE
Sbjct: 2   SLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTE 61

Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
           EEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 120 G 118
           G
Sbjct: 122 G 122


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  227 bits (556), Expect = 5e-60
 Identities = 106/121 (87%), Positives = 116/121 (95%)
 Frame = -3

Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
           SLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTE
Sbjct: 2   SLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTE 61

Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
           EEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 120 G 118
           G
Sbjct: 122 G 122


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  227 bits (556), Expect = 5e-60
 Identities = 106/121 (87%), Positives = 116/121 (95%)
 Frame = -3

Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
           SLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTE
Sbjct: 2   SLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTE 61

Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
           EEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 120 G 118
           G
Sbjct: 122 G 122


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  227 bits (556), Expect = 5e-60
 Identities = 106/121 (87%), Positives = 116/121 (95%)
 Frame = -3

Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
           SLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTE
Sbjct: 2   SLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTE 61

Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
           EEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 120 G 118
           G
Sbjct: 122 G 122


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  224 bits (548), Expect = 4e-59
 Identities = 105/121 (86%), Positives = 115/121 (95%)
 Frame = -3

Query: 480 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 301
           SLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTE
Sbjct: 2   SLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTE 61

Query: 300 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 121
           EEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 120 G 118
           G
Sbjct: 122 G 122


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = -3

Query: 387 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIP 244
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+VTI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>AE013599-2749|AAF57651.3|  766|Drosophila melanogaster CG18604-PA
           protein.
          Length = 766

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +3

Query: 21  FNLLLLGHTNSSTSSACGLSVLTTDTQTPVVTYPYEHGSSSAFPNLHEAWSLNWKKSTGC 200
           F+ + LG +NS++SS C   V +T         PY  G++     LH+        STGC
Sbjct: 288 FSSINLGASNSNSSSGCQSPVFSTSFSGSCSPNPYLPGAAGGSSPLHQITKGISGLSTGC 347


>AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p
           protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 212 TISFCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 370
           T  FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 215 TFDFCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


>AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA
           protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 212 TISFCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 370
           T  FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 215 TFDFCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
            protein.
          Length = 5146

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +3

Query: 39   GHTNSSTSSACGLSVLTTDTQTPVVTYPYEHGSSSAFP 152
            GHTNSS +S   L     +   P     ++H + S FP
Sbjct: 3427 GHTNSSRTSGSALINARPNRDLPACLQRHDHPAGSIFP 3464


>AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p
           protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 336 IDLDKRAGECTEEEVEKIVTIMSNPRQ 256
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 234 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 145
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 234 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 145
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-PC,
           isoform C protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 336 IDLDKRAGECTEEEVEKIVTIMSNPRQ 256
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-PB,
           isoform B protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 336 IDLDKRAGECTEEEVEKIVTIMSNPRQ 256
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-PA,
           isoform A protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 336 IDLDKRAGECTEEEVEKIVTIMSNPRQ 256
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,294,059
Number of Sequences: 53049
Number of extensions: 366398
Number of successful extensions: 1036
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)