BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P09
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 187 9e-48
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 187 9e-48
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 187 9e-48
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 187 9e-48
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 85 9e-17
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 1e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 4e-06
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 32 0.51
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 32 0.51
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 32 0.51
BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein. 29 3.6
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein. 29 3.6
BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi... 29 3.6
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein. 29 3.6
X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein. 29 4.8
BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein. 29 4.8
AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth ... 29 4.8
AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein. 29 4.8
AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens ... 29 4.8
AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein. 29 4.8
X14174-1|CAA32376.1| 524|Homo sapiens protein ( Human mRNA for ... 28 8.4
M24439-1|AAB59378.1| 524|Homo sapiens alkaline phosphatase prot... 28 8.4
BC126165-1|AAI26166.1| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
BC110909-1|AAI10910.2| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
BC090861-1|AAH90861.2| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
BC066116-1|AAH66116.2| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
BC021289-1|AAH21289.3| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
AY904367-1|AAW82349.1| 243|Homo sapiens cell cycle-related kina... 28 8.4
AL592309-9|CAH72079.1| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
AL359815-9|CAI16259.1| 524|Homo sapiens alkaline phosphatase, l... 28 8.4
AB209814-1|BAD93051.1| 602|Homo sapiens ALPL protein variant pr... 28 8.4
AB012643-1|BAA88367.1| 341|Homo sapiens alkaline phosphatase pr... 28 8.4
AB011406-1|BAA32129.1| 524|Homo sapiens alkalin phosphatase pro... 28 8.4
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 187 bits (456), Expect = 9e-48
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = +2
Query: 65 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPTGIDNRVRRRFKGQYLMPNIGYGS 244
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKP GIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 245 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVS 370
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VS
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVS 104
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 187 bits (456), Expect = 9e-48
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = +2
Query: 65 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPTGIDNRVRRRFKGQYLMPNIGYGS 244
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKP GIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 245 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVS 370
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VS
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVS 104
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 187 bits (456), Expect = 9e-48
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = +2
Query: 65 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPTGIDNRVRRRFKGQYLMPNIGYGS 244
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKP GIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 245 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVS 370
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VS
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVS 104
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 187 bits (456), Expect = 9e-48
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = +2
Query: 65 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPTGIDNRVRRRFKGQYLMPNIGYGS 244
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKP GIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 245 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVS 370
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VS
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVS 104
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 84.6 bits (200), Expect = 9e-17
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +2
Query: 221 MPNIGYGSNKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVS 370
MPNIGYG NKKT+H+LPSGF K LVHNV+ELE+L++ N+ YC EI H VS
Sbjct: 27 MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVS 76
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 65 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 157
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 65 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 154
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 152 KRNWRKPTGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 274
KR++ + G+D +++R LMP+ G ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 152 KRNWRKPTGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 274
KR++ + G+D +++R LMP+ G ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 152 KRNWRKPTGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 274
KR++ + G+D +++R LMP+ G ++ +TRHM PS
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166
>BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.
Length = 1106
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 75 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNRQVSTTEY 194
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
Length = 2011
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 75 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNRQVSTTEY 194
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 75 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNRQVSTTEY 194
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
Length = 1966
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 75 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNRQVSTTEY 194
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein.
Length = 593
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 371 RRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 261
RR + PR I C + PV + C P L W C
Sbjct: 432 RRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 371 RRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 261
RR + PR I C + PV + C P L W C
Sbjct: 432 RRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth
factor protein.
Length = 593
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 371 RRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 261
RR + PR I C + PV + C P L W C
Sbjct: 432 RRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein.
Length = 593
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 371 RRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 261
RR + PR I C + PV + C P L W C
Sbjct: 432 RRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
Length = 413
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 371 RRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 261
RR + PR I C + PV + C P L W C
Sbjct: 252 RRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 287
>AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein.
Length = 593
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 371 RRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 261
RR + PR I C + PV + C P L W C
Sbjct: 432 RRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>X14174-1|CAA32376.1| 524|Homo sapiens protein ( Human mRNA for
liver-type alkaline phosphatase (EC 3.1.3.1). ).
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>M24439-1|AAB59378.1| 524|Homo sapiens alkaline phosphatase
protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>BC126165-1|AAI26166.1| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>BC110909-1|AAI10910.2| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>BC090861-1|AAH90861.2| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>BC066116-1|AAH66116.2| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>BC021289-1|AAH21289.3| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>AY904367-1|AAW82349.1| 243|Homo sapiens cell cycle-related kinase
cardiac splice variant protein.
Length = 243
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 344 SISCSASSGSPVRERCGPRLYENRWVACDGSSYLNHNQCWASS 216
S+SC ++ SP+R RC W C +S H CW +S
Sbjct: 169 SLSCRTTTRSPLRSRC-----PCPWRRCCLTSLPRHWICWVNS 206
>AL592309-9|CAH72079.1| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>AL359815-9|CAI16259.1| 524|Homo sapiens alkaline phosphatase,
liver/bone/kidney protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
>AB209814-1|BAD93051.1| 602|Homo sapiens ALPL protein variant
protein.
Length = 602
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 265 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 303
>AB012643-1|BAA88367.1| 341|Homo sapiens alkaline phosphatase
protein.
Length = 341
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 4 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 42
>AB011406-1|BAA32129.1| 524|Homo sapiens alkalin phosphatase
protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 YGSNKKTRHMLPSGFRKV---LVHNVRELEILMMQNRKY 343
Y N+ L G + + L+HN+R+++++M RKY
Sbjct: 187 YSDNEMPPEALSQGCKDIAYQLMHNIRDIDVIMGGGRKY 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,554,350
Number of Sequences: 237096
Number of extensions: 1075837
Number of successful extensions: 2217
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2217
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -