Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P08
         (310 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q21GN8 Cluster: Putative uncharacterized iron-regulated...    32   2.9  
UniRef50_A4VES1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  
UniRef50_Q4S5L9 Cluster: Chromosome 9 SCAF14729, whole genome sh...    30   8.8  
UniRef50_Q5CTP5 Cluster: DHHC family palmitoyl transferase fused...    30   8.8  
UniRef50_Q18133 Cluster: Putative uncharacterized protein; n=2; ...    30   8.8  
UniRef50_Q6KZZ3 Cluster: Metal dependent hydrolase; n=2; Thermop...    30   8.8  

>UniRef50_Q21GN8 Cluster: Putative uncharacterized iron-regulated
           membrane protein; n=1; Saccharophagus degradans
           2-40|Rep: Putative uncharacterized iron-regulated
           membrane protein - Saccharophagus degradans (strain 2-40
           / ATCC 43961 / DSM 17024)
          Length = 371

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  NKRFVINPIEHLPGVYASFPLFSYCLSIVSFLWVLDT 176
           N +  I  I  L GVY   PLF   LS ++F WV  T
Sbjct: 190 NAKSKIGQIHALLGVYTFIPLFLISLSGIAFFWVAPT 226


>UniRef50_A4VES1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 68

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -1

Query: 100 RCSMGLITNLLFRHIYFFSMIIMLTL 23
           R S+ +I+ LLFRHIYF ++II + +
Sbjct: 9   RRSVIIISQLLFRHIYFKTLIIFIAI 34


>UniRef50_Q4S5L9 Cluster: Chromosome 9 SCAF14729, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
           SCAF14729, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1464

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 57  ICRNKRFVINPIEHLPGVYASFPLFSYCLSIVSFLWVLDTLI 182
           +C      +  +  +PGV  S   FS+CL++V FL     LI
Sbjct: 312 MCLTDHKPLPELSRIPGVVLSGAAFSHCLAVVEFLHAYGKLI 353


>UniRef50_Q5CTP5 Cluster: DHHC family palmitoyl transferase fused to
           a KOW domain, signal peptide; n=2; Cryptosporidium|Rep:
           DHHC family palmitoyl transferase fused to a KOW domain,
           signal peptide - Cryptosporidium parvum Iowa II
          Length = 413

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 218 CAHALILIIMIFY*CVEYP 162
           CA++LILI + FY C+ YP
Sbjct: 171 CAYSLILICLRFYKCISYP 189


>UniRef50_Q18133 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 160

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 76  LLLTPLSTFPAFTPAFHCFPIVFLLFHFYGY 168
           LLL+P   FPA + AF  F I FL FH + +
Sbjct: 23  LLLSPFYQFPALSTAFPLFNI-FLFFHSHSF 52


>UniRef50_Q6KZZ3 Cluster: Metal dependent hydrolase; n=2;
           Thermoplasmatales|Rep: Metal dependent hydrolase -
           Picrophilus torridus
          Length = 254

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 55  KYVEIRDLLLTPLSTFPAFTPAFHCFPI 138
           KY+   DL+ TP    PA+ P   C+P+
Sbjct: 181 KYIYFGDLVPTPFHLKPAYIPGVDCYPL 208


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,397,114
Number of Sequences: 1657284
Number of extensions: 5825962
Number of successful extensions: 14431
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14429
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)