Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P08
         (310 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related prot...    23   2.0  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   2.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   6.0  
AF283273-1|AAG15375.1|   62|Anopheles gambiae phenylalanine hydr...    21   7.9  

>Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related
           protease protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 252 RHRAPRSVHRAVCARPYI 199
           RH+  R VHR    RPY+
Sbjct: 26  RHKLTRPVHRFAPNRPYL 43


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 174 CRVPIKMKQ*KDNRKTMESWRKRREG 97
           C  PI + Q KDN KT +SW  +  G
Sbjct: 24  CACPIGI-QLKDNGKTCKSWPLQLSG 48


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 156 MKQ*KDNRKTMESWRKRREGAQ 91
           +KQ K  +K +ESW ++ + AQ
Sbjct: 891 LKQQKTLQKELESWIQKEKEAQ 912


>AF283273-1|AAG15375.1|   62|Anopheles gambiae phenylalanine
          hydroxylase protein.
          Length = 62

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 68 ISTYLLLFYDHYVNIIHH 15
          ++  L +F DH VN++H+
Sbjct: 36 LAKMLRIFDDHRVNLLHN 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,949
Number of Sequences: 2352
Number of extensions: 7145
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)