Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P08
(310 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40423-2|AAA81451.1| 160|Caenorhabditis elegans Hypothetical pr... 30 0.29
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 0.87
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 0.87
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 1.2
AF125959-2|AAD14732.1| 531|Caenorhabditis elegans Udp-glucurono... 28 1.2
AF039053-7|AAC25873.3| 295|Caenorhabditis elegans Serpentine re... 28 1.2
U58735-3|AAC48143.1| 337|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z77666-1|CAB01226.1| 399|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 25 8.1
>U40423-2|AAA81451.1| 160|Caenorhabditis elegans Hypothetical
protein C24H10.3 protein.
Length = 160
Score = 30.3 bits (65), Expect = 0.29
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 76 LLLTPLSTFPAFTPAFHCFPIVFLLFHFYGY 168
LLL+P FPA + AF F I FL FH + +
Sbjct: 23 LLLSPFYQFPALSTAFPLFNI-FLFFHSHSF 52
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 94 STFPAFTPAFH-CFPIVFLLFHFYGY 168
S F AF P+F FP+ F +FHF +
Sbjct: 15 SIFSAFIPSFFFTFPLFFFIFHFSSF 40
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 94 STFPAFTPAFH-CFPIVFLLFHFYGY 168
S F AF P+F FP+ F +FHF +
Sbjct: 15 SIFSAFIPSFFFTFPLFFFIFHFSSF 40
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 274 QYAHVRLPAPCAAQCAP 224
QYA P PCAAQC P
Sbjct: 338 QYAVQMAPTPCAAQCMP 354
>AF125959-2|AAD14732.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein8 protein.
Length = 531
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 106 PGRCSMGLITNLLFRHIYFFSMIIMLTLY-TIKIL 5
P MGLI + I+F S+I +LT+Y T KI+
Sbjct: 484 PAINQMGLIAHYYLDVIFFLSLIFILTVYLTFKII 518
>AF039053-7|AAC25873.3| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 22 protein.
Length = 295
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 125 WKAGVNAGKVLNGVNNKSLISTYLLLFYDHYVNIIHH 15
WK K LN N +LI T ++ +D NI+ H
Sbjct: 192 WKVIKEKNKDLNKANRLALIDTAIIFLFDILSNIVIH 228
>U58735-3|AAC48143.1| 337|Caenorhabditis elegans Hypothetical
protein F20B4.2 protein.
Length = 337
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 267 HTCASRHRAPRSVHRAVCARPYIDHYDILLMCR 169
HTC R R P A C+ P + + +LL+ +
Sbjct: 175 HTCEDRTRRPTFPVDAFCSTPNVQYETMLLIAK 207
>Z77666-1|CAB01226.1| 399|Caenorhabditis elegans Hypothetical
protein K08E7.1 protein.
Length = 399
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 87 PIEHLPGVYASFPLFSYCLSIVSFLWVLD 173
P+ L ++ PLF+YC S + F +LD
Sbjct: 136 PVSELESFFSMCPLFAYCASFI-FQRLLD 163
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 98 PSRRLRQLSIVFLLSFYCFIFMG 166
P R LSI + L +C++F+G
Sbjct: 411 PENNARDLSIGYCLVAFCYVFIG 433
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 98 PSRRLRQLSIVFLLSFYCFIFMG 166
P R LSI + L +C++F+G
Sbjct: 445 PENNARDLSIGYCLVAFCYVFIG 467
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 98 PSRRLRQLSIVFLLSFYCFIFMG 166
P R LSI + L +C++F+G
Sbjct: 443 PENNARDLSIGYCLVAFCYVFIG 465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,577,384
Number of Sequences: 27780
Number of extensions: 148010
Number of successful extensions: 412
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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