Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P07
         (260 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TT96 Cluster: Putative uncharacterized protein; n=1; ...    33   0.95 
UniRef50_Q4Y6A8 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_Q7R940 Cluster: Putative uncharacterized protein PY0702...    32   2.9  
UniRef50_Q4Z6H8 Cluster: Putative uncharacterized protein; n=6; ...    32   2.9  
UniRef50_Q8IBC1 Cluster: Putative uncharacterized protein MAL8P1...    31   3.8  
UniRef50_Q7YN57 Cluster: DNA-directed RNA polymerase subunit bet...    31   3.8  
UniRef50_Q05FP7 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_UPI00005ECC0F Cluster: PREDICTED: similar to LAG1 longe...    31   6.7  
UniRef50_Q8IKB4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  

>UniRef50_A7TT96 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 840

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 237 FTNSFSTIKLQ*IHFTSIKCYYKIIDITCIHSYEYYIEIKMNT 109
           F  S ST+K   I+ T+I C Y   + T +H Y+  ++I  NT
Sbjct: 634 FDQSLSTLKTNNINCTTIVCMYSNFEETKMHMYKRSVDIIFNT 676


>UniRef50_Q4Y6A8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 121

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 79  LTYLFFNILKSIHFYFNVIFIRMNTRYIYNFVIALY*CKMYL 204
           + Y  F I  SI F F  +FI  +  ++YNF I LY C + +
Sbjct: 62  IIYFLFAI-PSISFIFEKMFICYSFHFLYNFYILLYICALLI 102


>UniRef50_Q7R940 Cluster: Putative uncharacterized protein PY07026;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07026 - Plasmodium yoelii
           yoelii
          Length = 85

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 76  FLTYLFFNILKSIHFYFNVIFIRMNTRYIYNFV-IALY*CKMYLL*FNCAKTVRK 237
           ++ Y+FF +   +H Y  +++I ++  + Y FV I+LY C + LL     + +RK
Sbjct: 21  YIIYIFFFLFLYVHIYKYMLYIVLDFLFNYIFVHISLYICILKLLHSLFKRAMRK 75


>UniRef50_Q4Z6H8 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1243

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = +1

Query: 4   RGCMAYHWIY*MYYALPSXLRNQSFLT---YLFFNILKS-IHFYFNVIFIRMNTRYIYNF 171
           RG     +IY  YY L   + N++      Y+F  I+K  +HF ++ +F+ +NT + + +
Sbjct: 291 RGNELISYIY-SYYYLFININNKNLKNLCKYIFLRIIKPFLHFLYSYVFMGINTDFYFEY 349

Query: 172 VI 177
           ++
Sbjct: 350 IL 351


>UniRef50_Q8IBC1 Cluster: Putative uncharacterized protein
           MAL8P1.11; n=2; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.11 - Plasmodium falciparum (isolate 3D7)
          Length = 1916

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = +1

Query: 61  LRNQSFLTYLFFNILKSIHFYFNVIFIRMNTRYIYNFVIALY*CKMYLL*FNCAKTVRKR 240
           L N+    YL++N+L  ++FYF  I I+    YI + V+    C  ++  +N  K V+K+
Sbjct: 549 LYNKILKEYLYYNLLSCVYFYFYRI-IKNFQIYIQDIVLYGIYCCFFI--YNKIKAVKKK 605


>UniRef50_Q7YN57 Cluster: DNA-directed RNA polymerase subunit beta;
           n=1; Eimeria tenella|Rep: DNA-directed RNA polymerase
           subunit beta - Eimeria tenella
          Length = 1059

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +1

Query: 94  FNILKSIHFYFNVIFIRMNTRYIYNFVI 177
           +NI K + F+FN+ F ++NT YI+N V+
Sbjct: 225 YNIFKYLSFFFNLSF-KLNTYYIFNKVL 251


>UniRef50_Q05FP7 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 157

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 40  YYALPSXLRNQSFLTYLFFNILKSIHFYFNV-IFIRMNTRYIYNFVIALY 186
           Y+   S  +N+    + F  + K   FYF    +I  N +++YN++I  Y
Sbjct: 30  YFNKLSFYKNKKLFLFNFIKMNKYYFFYFLANTYIYFNNKFVYNYIINSY 79


>UniRef50_UPI00005ECC0F Cluster: PREDICTED: similar to LAG1
           longevity assurance homolog 4 (S. cerevisiae),; n=4;
           Monodelphis domestica|Rep: PREDICTED: similar to LAG1
           longevity assurance homolog 4 (S. cerevisiae), -
           Monodelphis domestica
          Length = 397

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 28  IY*MYYALPSXLRNQSFLTYLFFNILKSIHFYFNVIFIRMNTRYIYNFVIA 180
           +Y  YY   S ++ Q F  Y FFN L  +    +V +  +  R +Y FV+A
Sbjct: 285 LYTTYY--DSMIKFQPFFGYYFFNALLMVLQVLHVFWSGLILRMVYKFVLA 333


>UniRef50_Q8IKB4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1281

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
 Frame = +1

Query: 64  RNQSFLTYLFFNILKSIHFYF-------NVIFIRMNTRYIYNFV 174
           RN+ +LTY F+N  K +H+ F       N ++ +MN   IY ++
Sbjct: 422 RNKKYLTYKFYNTHKIVHYNFCLFIGIYNKLYFKMNGIDIYIYI 465


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,291,834
Number of Sequences: 1657284
Number of extensions: 3577465
Number of successful extensions: 8155
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8150
length of database: 575,637,011
effective HSP length: 64
effective length of database: 469,570,835
effective search space used: 10330558370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)