Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P07
(260 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 28 0.014
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 28 0.014
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 0.31
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 0.31
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 0.31
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 0.31
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 19 6.7
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 19 6.7
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 19 8.8
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 28.3 bits (60), Expect = 0.014
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 70 QSFLTYLFFNILKSIHFY--FNVIFIRMNTRYIYNFVIALY*CKMYLL*F-NCAKTVRKR 240
QS+++Y+F NI+ + FY F + + +M + NF + KM L+ + N K +R +
Sbjct: 129 QSYMSYIFANIM-GLEFYKQFAIEYFQMYVLFFVNFAFFVV-VKMLLVRYRNLTKQLRFK 186
Query: 241 YR 246
R
Sbjct: 187 LR 188
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 28.3 bits (60), Expect = 0.014
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 70 QSFLTYLFFNILKSIHFY--FNVIFIRMNTRYIYNFVIALY*CKMYLL*F-NCAKTVRKR 240
QS+++Y+F NI+ + FY F + + +M + NF + KM L+ + N K +R +
Sbjct: 129 QSYMSYIFANIM-GLEFYKQFAIEYFQMYVLFFVNFAFFVV-VKMLLVRYRNLTKQLRFK 186
Query: 241 YR 246
R
Sbjct: 187 LR 188
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.31
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 61 LRNQSFLTYLFFNILKSIHFYFNVIFI 141
L + Y+F ++ K + F+ +V+FI
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFI 317
Score = 19.8 bits (39), Expect = 5.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 61 LRNQSFLTYLFFNILKSIHFYFNVIFIRMNTRYIY 165
LRN+S + FN L F V +++N I+
Sbjct: 1264 LRNKSVFAFFMFNAL----FVLVVFLLQLNKDQIH 1294
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.31
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 61 LRNQSFLTYLFFNILKSIHFYFNVIFI 141
L + Y+F ++ K + F+ +V+FI
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFI 317
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.31
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 61 LRNQSFLTYLFFNILKSIHFYFNVIFI 141
L + Y+F ++ K + F+ +V+FI
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFI 317
Score = 19.8 bits (39), Expect = 5.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 61 LRNQSFLTYLFFNILKSIHFYFNVIFIRMNTRYIY 165
LRN+S + FN L F V +++N I+
Sbjct: 1264 LRNKSVFAFFMFNAL----FVLVVFLLQLNKDQIH 1294
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.8 bits (49), Expect = 0.31
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 61 LRNQSFLTYLFFNILKSIHFYFNVIFI 141
L + Y+F ++ K + F+ +V+FI
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFI 317
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 19.4 bits (38), Expect = 6.7
Identities = 6/24 (25%), Positives = 12/24 (50%)
Frame = -3
Query: 201 IHFTSIKCYYKIIDITCIHSYEYY 130
I+ ++ + D C H+ EY+
Sbjct: 132 IYSICVQTEKSVFDFLCRHTVEYF 155
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 19.4 bits (38), Expect = 6.7
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +1
Query: 76 FLTYLFFNILKSIHFYFNVIFIRMNTRYIYNFVI 177
F+ + +L + +FY+ I + + Y F+I
Sbjct: 89 FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFII 122
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 19.0 bits (37), Expect = 8.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 171 KIIDITCIHSYEYY 130
K++D I SY+Y+
Sbjct: 192 KVVDFINIMSYDYH 205
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,840
Number of Sequences: 336
Number of extensions: 1226
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used: 4164927
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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