Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P05
         (141 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    19   5.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   5.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   5.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   5.4  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            19   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   9.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             18   9.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 37  RHLVFLVPNSCS 2
           RHL FL P+S S
Sbjct: 222 RHLGFLKPDSSS 233


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 73  LKIYWYIFT 47
           +K+Y+Y FT
Sbjct: 472 MKVYYYFFT 480


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 127 HSASTSSIICSVIRTRHRLKIYW 59
           H    +++ CSV R    L I W
Sbjct: 623 HLGERTTLTCSVTRGDLPLSISW 645


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 73  LKIYWYIFT 47
           +K+Y+Y FT
Sbjct: 472 MKVYYYFFT 480


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 100 CSVIRTRHRLKIYWYIF 50
           CS+    H   IYW ++
Sbjct: 27  CSIKPKDHNGSIYWSMY 43


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 69  FKRWRVLITLQIIELVL 119
           F  W+V +  +++EL L
Sbjct: 905 FPVWQVTLNARLVELSL 921


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 41  LIGKYVPVNF 70
           L+GK V VNF
Sbjct: 938 LVGKTVAVNF 947


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,837
Number of Sequences: 438
Number of extensions: 390
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used:  2555823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)