Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P04
(454 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 150 9e-38
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 80 2e-16
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 74 1e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 73 3e-14
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 71 6e-14
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 70 2e-13
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 60 1e-10
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 59 3e-10
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 58 6e-10
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 58 8e-10
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 51 7e-08
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 49 3e-07
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 32 0.047
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 26 3.1
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 25 4.1
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 150 bits (364), Expect = 9e-38
Identities = 71/134 (52%), Positives = 92/134 (68%)
Frame = +2
Query: 53 MIKLFSLKQQKKDEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCSTEFSDPDDLLNF 232
M K++ LK KK+ + A G S AQ+RI KD+ +L +P T ST + DP L
Sbjct: 1 MRKIWELK--KKEAQKEKNASG----ISPAQIRIQKDVTDLEIPSTMSTSWPDPIKLNVL 54
Query: 233 KLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWK 412
L I PDEG+Y+GG+F F ++ NYPH+PPKVKC +YHPNID+EGNVCLNILR+DW
Sbjct: 55 HLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWN 114
Query: 413 PVLTVNSIVYGLQY 454
PVL +NSI+ GLQ+
Sbjct: 115 PVLNLNSILVGLQF 128
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 79.8 bits (188), Expect = 2e-16
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Frame = +2
Query: 149 RITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHE 319
RI ++L +L P +CS DDL +++ I P + Y GG F S +YP +
Sbjct: 5 RINRELADLGKDPPSSCSAG-PVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 320 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
PPKV T +YHPNI+ G++CL+ILR+ W P LT++ ++ +
Sbjct: 64 PPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSI 106
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 73.7 bits (173), Expect = 1e-14
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Frame = +2
Query: 149 RITKDLNELNLPKTCSTE-FSDPDDLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEP 322
RI K+L ++ K + ++ DD+ + K + EG Y GG F+ ++ +YP P
Sbjct: 8 RIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRP 67
Query: 323 PKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQ 451
PK+ +T +YHPN+ + G +CL+IL++ W PV T+ S + LQ
Sbjct: 68 PKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQ 111
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 72.5 bits (170), Expect = 3e-14
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Frame = +2
Query: 89 DEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCS-TEFSDPD-DLLNFK-LIICPDEG 259
+ + S+ AG + S + R+ +L L + T + F D D +LL++ I P +
Sbjct: 13 NSKNSSSAGMAVDGHSVTK-RLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDT 71
Query: 260 FYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIV 439
+Y G +F S NYP+ PP + + ++HPN+D+ GN+CL+IL++ W V V +I+
Sbjct: 72 YYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTIL 131
Query: 440 YGLQ 451
LQ
Sbjct: 132 LSLQ 135
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 71.3 bits (167), Expect = 6e-14
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +2
Query: 149 RITKDLNELNL-PKTCSTEFSDPDDLLNFKLII-CPDEGFYRGGRFIFSFKVGPNYPHEP 322
RI K++ L P D+L FK+ + P + Y GG+F + YP P
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMP 65
Query: 323 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQ 451
P V+ T +YHPN+D G +CL+ L++DW P L + +++ +Q
Sbjct: 66 PNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQ 108
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 69.7 bits (163), Expect = 2e-13
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +2
Query: 248 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED-WKPVLT 424
P + Y GG+F FS K +YP +PP ++ T +YHPN D EGNVCL IL++ +KP +
Sbjct: 46 PSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIK 105
Query: 425 VNSIV 439
+ S++
Sbjct: 106 LRSVL 110
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 60.5 bits (140), Expect = 1e-10
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +2
Query: 218 DLLNFKL-IICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 394
DL+N+K+ I + + GG + + YP PPK + ++HPN+ G VCL+I
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 395 LRED--WKPVLTVNSIVYGLQ 451
L E+ WKP +T+ I+ G+Q
Sbjct: 97 LNEEEGWKPAITIKQILLGIQ 117
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 59.3 bits (137), Expect = 3e-10
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +2
Query: 131 ASAAQLRITKDLNEL--NLPKTCSTEFSDPDDLLNFK-LIICPDEGFYRGGRFIFSFKVG 301
+SA++ + K L E+ N P+ S D + ++ +II P++ Y GG F +
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 302 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 397
+YP PPK+K T ++HPN+ G VC++IL
Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISIL 94
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 58.0 bits (134), Expect = 6e-10
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 218 DLLNFKLII-CPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLN 391
D+ ++K +I P E Y GG+++ V YP PP V +T + HPNI G VC++
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 392 ILREDWKPVLTVNS 433
IL+ W P ++ S
Sbjct: 93 ILKTHWSPAWSLQS 106
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 57.6 bits (133), Expect = 8e-10
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +2
Query: 131 ASAAQLRITKDLNELNLPKTCSTEFSDPDD--LLNFKLIICPDEGFYRGGRFIFSFKVGP 304
++ A+ R+ +D + S D +L +II P + + G F
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDE 61
Query: 305 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQ 451
YP++PP VK + ++HPN+ G +CL+IL+ W P V +I+ +Q
Sbjct: 62 QYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQ 110
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 51.2 bits (117), Expect = 7e-08
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = +2
Query: 128 KASAAQLRITKDLNEL--NLPKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKV 298
KA A + R+ K+ EL N P + S+ DD + +I PD + GG + + K
Sbjct: 3 KAMALR-RLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKF 61
Query: 299 GPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL 397
+YP PP +K E +HPN+ +G VC++IL
Sbjct: 62 PSDYPLGPPTLKFECEFFHPNVYKDGTVCISIL 94
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 49.2 bits (112), Expect = 3e-07
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 248 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 424
P E Y GG + ++ YP + P + ++HPNID L G+VCL+++ + W P+
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFD 98
Query: 425 VNSI 436
+ +I
Sbjct: 99 MINI 102
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 31.9 bits (69), Expect = 0.047
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +2
Query: 215 DDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 391
+++L + II P + Y GG++ + P+YP +PP ++ T +CL+
Sbjct: 32 ENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLS 89
Query: 392 IL---REDWKPVLTVNSIVYGL 448
+ W P V++I+ GL
Sbjct: 90 FSDFHPKSWNPSWMVSTILVGL 111
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.8 bits (54), Expect = 3.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 368 GLCWDDKLLFHISLLEVHE 312
GLC+D ++ FH +L EV +
Sbjct: 58 GLCYDPRMRFHATLSEVDD 76
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 4.1
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 179 LPKTCSTEFSDPDDLLNFKLII--CPDEGFYRGGRFIFSFKVGPNYPHEP 322
L S+ PD +LN K++ ++ +FI K GP Y H P
Sbjct: 226 LADKASSSIIKPDAILNKKIVDEKANSNLYFSAIKFINVMKKGPFYEHSP 275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,633,013
Number of Sequences: 5004
Number of extensions: 29586
Number of successful extensions: 107
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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