Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P04
(454 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 177 3e-45
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 86 9e-18
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 85 2e-17
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 85 3e-17
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 83 6e-17
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 83 6e-17
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 83 9e-17
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 83 9e-17
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 1e-16
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 1e-16
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 82 1e-16
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 82 1e-16
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 82 2e-16
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 82 2e-16
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 81 3e-16
At4g36800.1 68417.m05220 RUB1-conjugating enzyme, putative (RCE1... 80 6e-16
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 75 2e-14
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 73 1e-13
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 68 3e-12
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 68 3e-12
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 68 3e-12
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 67 5e-12
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 67 6e-12
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 66 8e-12
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 66 8e-12
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 66 1e-11
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 65 2e-11
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 64 3e-11
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 63 7e-11
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 62 2e-10
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 61 4e-10
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 59 1e-09
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 58 4e-09
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 56 8e-09
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 55 3e-08
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 54 6e-08
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 52 1e-07
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 51 4e-07
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 51 4e-07
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 51 4e-07
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 49 2e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 47 5e-06
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 46 9e-06
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 46 9e-06
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 42 2e-04
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 42 2e-04
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 40 6e-04
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati... 36 0.010
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 36 0.010
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 36 0.017
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 29 1.5
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 29 1.5
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 29 1.9
At4g10520.1 68417.m01724 subtilase family protein contains simil... 28 2.6
At3g18215.1 68416.m02317 expressed protein contains Pfam profile... 27 5.9
At5g63905.1 68418.m08024 expressed protein 27 7.8
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 177 bits (431), Expect = 3e-45
Identities = 79/135 (58%), Positives = 104/135 (77%), Gaps = 3/135 (2%)
Frame = +2
Query: 53 MIKLFSLKQQKKDEEGS--ARAGGSQKKASAAQLRITKDLNELNLPKTCSTEFSD-PDDL 223
MI LF +K+++++E S R + KK SA +LR+ KD++ELNLPK+C F + +DL
Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60
Query: 224 LNFKLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE 403
+NF++ I PDEG+Y G F+FSF+V YPHE PKVKC+T VYHPNIDLEGNVCLNILRE
Sbjct: 61 MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120
Query: 404 DWKPVLTVNSIVYGL 448
DWKPVL +N+++YGL
Sbjct: 121 DWKPVLNINTVIYGL 135
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 86.2 bits (204), Expect = 9e-18
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 AQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNY 310
A RI K+L +L P CS +D+ +++ I P E Y GG F+ S P+Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAG-PVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 311 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
P +PPKV +T VYHPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSI 106
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 AQLRITKDLNELNLPKTCSTEFSDP--DDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNY 310
A RI K+L +L S F+ P +D+ +++ I P E Y GG F+ + P+Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 311 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
P +PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 107
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L EL P +CS + D I+ P+E Y GG F+ + P+YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ GN+CL+IL++ W P LT++ ++ +
Sbjct: 62 FKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSI 106
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 83.4 bits (197), Expect = 6e-17
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 106
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 83.4 bits (197), Expect = 6e-17
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 106
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 83.0 bits (196), Expect = 9e-17
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 AQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNY 310
A RI K+L +L P +CS + DD+ ++ I P + + GG F+ + P+Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTG-DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 311 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
P +PPKV T VYHPNI+ G++CL+IL+E W P LTV+ ++ +
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSI 106
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 83.0 bits (196), Expect = 9e-17
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 AQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNY 310
A RI K+L +L P +CS + DD+ ++ I P + + GG F+ + P+Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTG-DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 311 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
P +PPKV T VYHPNI+ G++CL+IL+E W P LTV+ ++ +
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSI 106
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 82.6 bits (195), Expect = 1e-16
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 106
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 82.6 bits (195), Expect = 1e-16
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 106
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 82.2 bits (194), Expect = 1e-16
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 92 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 136
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 82.2 bits (194), Expect = 1e-16
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 106
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 81.8 bits (193), Expect = 2e-16
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P E Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 436
+PPKV T V+HPNI+ G++CL+IL+E W P LT++ +
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 81.8 bits (193), Expect = 2e-16
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +2
Query: 140 AQLRITKDLNELNL-PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYP 313
A RI K+L +L P T + +D+ +++ I P + Y GG F+ + P+YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 314 HEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
+PPKV T V+HPN++ G++CL+IL+E W P LT++ ++ +
Sbjct: 62 FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSI 106
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 81.0 bits (191), Expect = 3e-16
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 AQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNY 310
A RI+++L ++ P CS +D+ +++ I P + Y GG F S +Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 311 PHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
P +PPKV +T VYHPNID +G++CL+IL+E W P T + ++ +
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSI 107
>At4g36800.1 68417.m05220 RUB1-conjugating enzyme, putative (RCE1)
this gene is frameshifted and may be a pseudogene;
identical over first 79 amino acids to RUB1 conjugating
enzyme [Arabidopsis thaliana] GI:6635457
Length = 113
Score = 80.2 bits (189), Expect = 6e-16
Identities = 36/79 (45%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = +2
Query: 53 MIKLFSLKQQKKDE-EGSARAGGSQKKASAAQLRITKDLNELNLPKTCSTEF-SDPDDLL 226
MI LF +K++++++ + + R G S KK SA +LR+ KD++ELNLP +CS F + DDL+
Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60
Query: 227 NFKLIICPDEGFYRGGRFI 283
NF++ I PD+G+Y G F+
Sbjct: 61 NFEVSIKPDDGYYHNGTFV 79
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 74.9 bits (176), Expect = 2e-14
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Frame = +2
Query: 98 GSARAGGSQKKASAAQLRITKDLNELNL--PKTCSTEFSDPDDLLNF-KLIICPDEGFYR 268
G+A + ++ SA+ RI +++ ELN+ P CS D+L ++ II P Y
Sbjct: 23 GTASSWVAKTSVSASGKRIQREMAELNIDPPPDCSAG-PKGDNLYHWIATIIGPSGTPYE 81
Query: 269 GGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
GG F +YP +PPK+ +T +YH N+D G++ +NILR+ W P LT+ ++ +
Sbjct: 82 GGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAI 141
Query: 449 Q 451
+
Sbjct: 142 R 142
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 72.5 bits (170), Expect = 1e-13
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2
Query: 248 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTV 427
PD Y GG F S K +YP +PPK +T +YHPNI+ EG++C+NIL++ W P L V
Sbjct: 46 PDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMV 105
Query: 428 NSIVYGL 448
++ +
Sbjct: 106 EKVLLSI 112
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 68.1 bits (159), Expect = 3e-12
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 131 ASAAQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGP 304
++ A+ R+ +D L P S D + +L +I PD+ + GG F S +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 305 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQ 451
+YP++PP V+ + ++HPNI +G++CL+IL+ W P+ V +I+ +Q
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 68.1 bits (159), Expect = 3e-12
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 131 ASAAQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGP 304
++ A+ R+ +D L P S D + +L +I PD+ + GG F S +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 305 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQ 451
+YP++PP V+ + ++HPNI +G++CL+IL+ W P+ V +I+ +Q
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 68.1 bits (159), Expect = 3e-12
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 131 ASAAQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGP 304
++ A+ R+ +D L P S D + +L +I PD+ + GG F S +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 305 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQ 451
+YP++PP V+ + ++HPNI +G++CL+IL+ W P+ V +I+ +Q
Sbjct: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 67.3 bits (157), Expect = 5e-12
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +2
Query: 149 RITKDLNELNLPKTCSTEFSDPDDLLNF--KLIICPDEGFYRGGRFIFSFKVGPNYPHEP 322
RI K+ L S +D + + +I+ P + Y GG F + YP
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 323 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQ 451
PKV+ T +YHPNID G +CL+IL++ W P L + +++ +Q
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 111
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 203 FSDPDDLLNFK-LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 379
F + D++ +K I + + G + S +YP +PPKVK ET +HPN+D+ GN
Sbjct: 58 FPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGN 117
Query: 380 VCLNILREDWKPVLTVNSIVYGLQ 451
+CL+IL++ W V +I+ +Q
Sbjct: 118 ICLDILQDKWSSAYDVRTILLSIQ 141
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 66.5 bits (155), Expect = 8e-12
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +2
Query: 236 LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 415
+I+ P + Y GG F + YP PKV+ T +YHPNID G +CL+IL++ W P
Sbjct: 40 MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSP 99
Query: 416 VLTVNSIVYGLQ 451
L + +++ +Q
Sbjct: 100 ALQIRTVLLSIQ 111
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 66.5 bits (155), Expect = 8e-12
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +2
Query: 236 LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 415
+I+ P + Y GG F + YP PKV+ T +YHPNID G +CL+IL++ W P
Sbjct: 7 MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSP 66
Query: 416 VLTVNSIVYGLQ 451
L + +++ +Q
Sbjct: 67 ALQIRTVLLSIQ 78
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 66.1 bits (154), Expect = 1e-11
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +2
Query: 137 AAQLRITKDLNELNLPKTCSTEFS-DPDDLLNFK---LIICPDEGFYRGGRFIFSFKVGP 304
A++ R+ K+ E+ K + DD FK LI P E Y GG F +F V
Sbjct: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
Query: 305 NYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSI 436
YP +PP+V+ T ++HPN+ + G +CL+IL+ W P T+ S+
Sbjct: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSV 107
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 64.9 bits (151), Expect = 2e-11
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +2
Query: 149 RITKDLNELNLPKTCSTEFSDPDDLLNF--KLIICPDEGFYRGGRFIFSFKVGPNYPHEP 322
RI K+ L S +D + + +I+ P + Y GG F + YP
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 323 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIV 439
PKV+ T +YHPNID G +CL+IL++ W P L + +++
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVL 107
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 64.5 bits (150), Expect = 3e-11
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 203 FSDPDDLLNFK-LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN 379
F + D++ +K I + + G + S +YP + PKVK ET +HPN+DL GN
Sbjct: 59 FPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGN 118
Query: 380 VCLNILREDWKPVLTVNSIVYGLQ 451
+CL+IL++ W V +I+ +Q
Sbjct: 119 ICLDILQDKWSSAYDVRTILLSIQ 142
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 63.3 bits (147), Expect = 7e-11
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIV 439
Y GG F + YP EPPK++ T V+HPNI + G +CL+IL++ W P LT+ + +
Sbjct: 47 YEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTAL 106
Query: 440 YGLQ 451
+Q
Sbjct: 107 VSIQ 110
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 263 YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED--WKPVLTVNSI 436
+ GG F + +YP +PPK K +HPN+ G VCL+IL ED W+P +TV I
Sbjct: 54 WEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQI 113
Query: 437 VYGLQ 451
+ G+Q
Sbjct: 114 LVGIQ 118
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 60.9 bits (141), Expect = 4e-10
Identities = 24/72 (33%), Positives = 45/72 (62%)
Frame = +2
Query: 236 LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 415
LI P++ + GG F + +YP++PP V+ + ++HPNI +G++CL+IL+ W P
Sbjct: 39 LIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSP 98
Query: 416 VLTVNSIVYGLQ 451
+ V +++ +Q
Sbjct: 99 IYDVAAVLTSIQ 110
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 59.3 bits (137), Expect = 1e-09
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +2
Query: 131 ASAAQLRITKDLNELN--LPKTCSTEFSDPDDLLNFKLIICPDEGF-YRGGRFIFSFKVG 301
+ +A+ R+ K+ E + L + P+++ ++ + G Y G F S +
Sbjct: 27 SKSAENRLWKEFQEKDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIP 86
Query: 302 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGL 448
P YP+EPPK+ +T ++HPNI G + ++IL W LT+N ++ +
Sbjct: 87 PKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVLLSI 135
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 57.6 bits (133), Expect = 4e-09
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 248 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL----REDWKP 415
P++ Y G F ++ YP +PP V T +YHPNID G +CL+IL + W+P
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQP 113
Query: 416 VLTVNSIVYGLQ 451
L +++++ ++
Sbjct: 114 SLNISTVLTSMR 125
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 56.4 bits (130), Expect = 8e-09
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 263 YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIV 439
Y G F + ++PH PPK T ++HPN+ G +C+N L++DW P L + ++
Sbjct: 54 YENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVL 112
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 54.8 bits (126), Expect = 3e-08
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 248 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 424
P + Y+GG + ++ YP++ P V T +YHPN+D L G+VCL+++ + W P+
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFD 98
Query: 425 VNSI 436
+ ++
Sbjct: 99 LVNV 102
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 53.6 bits (123), Expect = 6e-08
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 248 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 424
P + Y GG + ++ YP++ P V T +YHPN+D + G+VCL+++ + W P+
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFD 98
Query: 425 VNSI 436
+ ++
Sbjct: 99 LVNV 102
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 52.4 bits (120), Expect = 1e-07
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Frame = +2
Query: 239 IICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 400
II P + Y GG F NYP+ PP V+ + ++HPN+ +G VC++IL
Sbjct: 41 IIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDP 100
Query: 401 -------EDWKPVLTVNSIVYGL 448
E W PV TV SI+ +
Sbjct: 101 SGYELASERWTPVHTVESIMLSI 123
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 50.8 bits (116), Expect = 4e-07
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Frame = +2
Query: 239 IICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 400
II P + Y GG F NYP+ PP V+ + ++HPN+ +G VC++IL
Sbjct: 73 IIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDP 132
Query: 401 -------EDWKPVLTVNSIVYGL 448
E W PV TV SI+ +
Sbjct: 133 SGYELASERWTPVHTVESIMLSI 155
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 50.8 bits (116), Expect = 4e-07
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 215 DDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL 388
DDL F + P + Y+GG + ++ YP++ P V +YHPN+D G VCL
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 389 NILREDWKPVLTVNSI 436
+++ + W P+ + ++
Sbjct: 87 DVINQTWSPMFDLINV 102
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 50.8 bits (116), Expect = 4e-07
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 101 SARAGGSQKKASAAQLRITKDLNELNLPKTCSTEFSDPDDLLNFKLIICPDEG-FYRGGR 277
S+ A + + A R+ K+L+E L D+L + + + G Y
Sbjct: 3 SSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANET 62
Query: 278 FIFSFKVGPNYPHEPPKVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 436
+ + +YP E P+V A HP+I G++CL+IL + W P +TVNS+
Sbjct: 63 YQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSV 116
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Frame = +2
Query: 239 IICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR------ 400
I+ P + Y GG F NYP PP V + ++HPN+ +G VC++IL
Sbjct: 42 IMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDP 101
Query: 401 -------EDWKPVLTVNSIVYGL 448
E W PV TV SIV +
Sbjct: 102 HGYELASERWTPVHTVESIVLSI 124
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.2 bits (107), Expect = 5e-06
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 170 ELNLPKTCSTEFSDPD-DLLNFKLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETA 346
E NLP T + DLL L+ P Y G F F + P YPHEPP V +
Sbjct: 675 EANLPNTIYVRVCEERMDLLRAALVGAPGTP-YHDGLFFFDIMLPPQYPHEPPMVHYHSG 733
Query: 347 --VYHPNIDLEGNVCLNIL 397
+PN+ G VCL++L
Sbjct: 734 GMRLNPNLYESGRVCLSLL 752
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 149 RITKDLNELNLPKTCSTEFSDPDDLLNFKLIICPDEG-FYRGGRFIFSFKVGPNYPHEPP 325
R+ K+L+E + + D+L + + + G Y + + +YP E P
Sbjct: 19 RLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAP 78
Query: 326 KVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 436
+V A HP+I G++CL+IL + W P +TV+S+
Sbjct: 79 QVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSV 116
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 46.4 bits (105), Expect = 9e-06
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +2
Query: 101 SARAGGSQKKASAAQLRITKDLNELNLPKTCSTEFSDPDDLLNFKLIICPDEG-FYRGGR 277
S+ A + + A R+ K+L E + + D+L + + + G Y
Sbjct: 3 SSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDT 62
Query: 278 FIFSFKVGPNYPHEPPKVK-CETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 436
+ +YP E P+V A HP+I G++CL+IL + W P +TV+SI
Sbjct: 63 YQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 212 PDDLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 388
P+D+L + ++ EG + GG + K P YP++PP + T + + +CL
Sbjct: 31 PNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICL 88
Query: 389 NIL---REDWKPVLTVNSIVYGL 448
++ E W P+ +V+SI+ GL
Sbjct: 89 SMSDFHPESWNPMWSVSSILTGL 111
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 212 PDDLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 388
P+D+L + ++ EG + GG + K P YP++PP + T + + +CL
Sbjct: 31 PNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICL 88
Query: 389 NIL---REDWKPVLTVNSIVYGL 448
++ E W P+ +V+SI+ GL
Sbjct: 89 SMSDFHPESWNPMWSVSSILTGL 111
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 40.3 bits (90), Expect = 6e-04
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 305 NYPHEPPKVKCE-TAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 436
+YP E P+V + A HP+I G++CL++L + W P + ++SI
Sbjct: 72 HYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSI 116
>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
similar to inorganic phosphate transporter (GI:3869190)
[Arabidopsis thaliana]
Length = 280
Score = 36.3 bits (80), Expect = 0.010
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 203 FSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGPNYP 313
F++ D+ F L IC E ++ RF+FSF GPNYP
Sbjct: 244 FTEVDEK-RFALTICQSENWF--SRFVFSFNFGPNYP 277
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 36.3 bits (80), Expect = 0.010
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 263 YRGGRFIFSFKVGPNYPHEPPKVKCETAVY--HPNIDLEGNVCLNIL 397
Y+ G F F F + +YP PP + + +PN+ EG VCL++L
Sbjct: 894 YQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLL 940
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 35.5 bits (78), Expect = 0.017
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Frame = +2
Query: 176 NLPKTCSTEFSDPD-DLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEPPKVKCETA- 346
NLP+T + DLL + +I EG Y G F F + YP PPKV +
Sbjct: 620 NLPETIFVRACESRIDLL--RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGG 677
Query: 347 -VYHPNIDLEGNVCLNIL-------REDWKP 415
+PN+ G VCL+++ RE W P
Sbjct: 678 LRINPNLYKCGKVCLSLISTWTGKKREKWLP 708
Score = 34.3 bits (75), Expect = 0.039
Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Frame = +2
Query: 125 KKASAAQLRITKDLNELNLPKTCSTEFSDPDDLLNFKLIICPDEGF-YRGGRFIFSFKVG 301
KK A + DL E + C + DLL + +I EG Y G F F +
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRM----DLL--RAVIIGAEGTPYHDGLFFFDIQFP 327
Query: 302 PNYPHEPPKVKCETA--VYHPNIDLEGNVCLNIL-------REDWKP 415
YP PP V + +PN+ G VCL++L RE W P
Sbjct: 328 DTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLP 374
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 158 KDLNELNLPKTCSTEFSDPD-DLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEPPKV 331
K LN+ NLP+T + DLL + +I EG Y G F F + YP PP V
Sbjct: 927 KILNQ-NLPETIFVRACESRMDLL--RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNV 983
Query: 332 KCETA--VYHPNIDLEGNVCLNI 394
+ +PN+ G V ++I
Sbjct: 984 YYHSGGLRINPNLYNCGKVLVSI 1006
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 29.1 bits (62), Expect = 1.5
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Frame = +2
Query: 59 KLFSLKQQKKDEEGSARAGGSQKKASAAQLRITKD--LNELNLPKTCSTE-FSDPDDLLN 229
K F + + D +++ S++ + RI + + E +LP+ + DLL
Sbjct: 306 KRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLR 365
Query: 230 FKLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETA--VYHPNIDLEGNVCLNIL-- 397
+II Y G F F YP PP V + +PN+ G VCL++L
Sbjct: 366 -AVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGT 424
Query: 398 -----REDWKP 415
RE W P
Sbjct: 425 WSGNQREKWIP 435
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +2
Query: 188 TCSTEFSDPDDLLNFK---LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHP 358
T S D DD+L I+ P Y G F G +YP PP V+ ++ +
Sbjct: 31 TVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMA 90
Query: 359 NIDLEGNV 382
++ E V
Sbjct: 91 CVNPENGV 98
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 28.7 bits (61), Expect = 1.9
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Frame = +2
Query: 188 TCSTEFSDPDDLLNFK---LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHP 358
T S D DD+ I+ P Y G F G YP PP V+ +T +
Sbjct: 31 TVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMA 90
Query: 359 NIDLEGNV---CLNILREDWKPVLTVNSIVYGLQ 451
++ E V L + +W+ T+ I+ L+
Sbjct: 91 CVNPETGVVEPSLFPMLTNWRREYTMEDILVKLK 124
>At4g10520.1 68417.m01724 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 756
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 296 VGPNYPHEPPKVKCETAVYHPNIDLEGNVCL 388
VG YP P CE +PN +EG V L
Sbjct: 374 VGLTYPESPLSGDCEKLSANPNSTMEGKVVL 404
>At3g18215.1 68416.m02317 expressed protein contains Pfam profile
PF04654: Protein of unknown function, DUF599
Length = 244
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -2
Query: 243 IINLKLSKSSGSENSVLQVL-----GRFSSFKSFVIRSCAADAFFC 121
II + +S SS S+++ ++ R +SFK+F I C AF C
Sbjct: 88 IIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILICFLMAFLC 133
>At5g63905.1 68418.m08024 expressed protein
Length = 76
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 74 KQQKKDEEGSARAGGSQKKASAAQLR 151
K+Q+K+EE A A K A AAQ R
Sbjct: 12 KEQRKEEERQASAEARAKAAEAAQRR 37
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,488,046
Number of Sequences: 28952
Number of extensions: 153696
Number of successful extensions: 474
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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