Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P03
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   3.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   3.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 338 QCFYFLFFHFLITYMYIINDPYSGALK 418
           QC Y    +FL+ + Y++ND  S   K
Sbjct: 125 QCMYM---YFLLGFRYLVNDELSAHSK 148


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 338 QCFYFLFFHFLITYMYIINDPYSGALK 418
           QC Y    +FL+ + Y++ND  S   K
Sbjct: 439 QCMYM---YFLLGFRYLVNDELSAHSK 462


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -1

Query: 454 NFTLLPVMSLKIFQSSTIWIINDIHI 377
           N  +  V+     Q + IW+ ND+ +
Sbjct: 209 NIVMALVLQFITLQHTFIWVFNDVFV 234


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -1

Query: 454 NFTLLPVMSLKIFQSSTIWIINDIHI 377
           N  +  V+     Q + IW+ ND+ +
Sbjct: 209 NIVMALVLQFITLQHTFIWVFNDVFV 234


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -1

Query: 454 NFTLLPVMSLKIFQSSTIWIINDIHI 377
           N  +  V+     Q + IW+ ND+ +
Sbjct: 209 NIVMALVLQFITLQHTFIWVFNDVFV 234


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 361 PLFNYIYVY 387
           P+FN +YVY
Sbjct: 153 PIFNLVYVY 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,631
Number of Sequences: 336
Number of extensions: 2315
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)