Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_P02
(444 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 231 1e-61
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 231 1e-61
04_01_0042 + 473912-474058,474208-474349,474442-476264 230 3e-61
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 229 8e-61
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 209 9e-55
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 158 2e-39
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 151 3e-37
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 149 7e-37
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 149 1e-36
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 140 2e-34
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 30 0.73
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 29 2.2
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 28 2.9
08_01_0471 - 4147170-4149207,4150535-4150692 27 5.1
01_07_0022 - 40543912-40544004,40545060-40545229,40545850-405459... 27 6.8
07_01_1094 + 10050988-10051177,10052128-10052591 27 9.0
02_05_0587 + 30162806-30163183,30163315-30163478,30163571-301636... 27 9.0
01_05_0327 + 20984336-20985478 27 9.0
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 231 bits (566), Expect = 1e-61
Identities = 106/144 (73%), Positives = 126/144 (87%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+KK IKE E +NK KPIW R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQL
Sbjct: 249 KKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQL 308
Query: 186 EFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLP 365
EF+A+LFVP+RAPFDLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLP
Sbjct: 309 EFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLP 368
Query: 366 LNISREMLQQNKILKVI*KESGKE 437
LNISREMLQQNKILKVI K K+
Sbjct: 369 LNISREMLQQNKILKVIRKNLVKK 392
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 231 bits (566), Expect = 1e-61
Identities = 106/144 (73%), Positives = 126/144 (87%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+KK IKE E +NK KPIW R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQL
Sbjct: 249 KKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQL 308
Query: 186 EFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLP 365
EF+A+LFVP+RAPFDLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLP
Sbjct: 309 EFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLP 368
Query: 366 LNISREMLQQNKILKVI*KESGKE 437
LNISREMLQQNKILKVI K K+
Sbjct: 369 LNISREMLQQNKILKVIRKNLVKK 392
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 230 bits (563), Expect = 3e-61
Identities = 105/146 (71%), Positives = 125/146 (85%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+KK + E E ++NK KPIW R ++I++EEY FYKSLTNDWEDHLAVKHFSVEGQL
Sbjct: 254 KKKKVNEVSHEWVQINKQKPIWLRKPEEISREEYASFYKSLTNDWEDHLAVKHFSVEGQL 313
Query: 186 EFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLP 365
EF+A+LFVPRRAPFDLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L F++GVVDS+DLP
Sbjct: 314 EFKAILFVPRRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGFVKGVVDSDDLP 373
Query: 366 LNISREMLQQNKILKVI*KESGKEML 443
LNISREMLQQNKILKVI K K+ +
Sbjct: 374 LNISREMLQQNKILKVIRKNLVKKCI 399
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 229 bits (560), Expect = 8e-61
Identities = 106/144 (73%), Positives = 125/144 (86%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+KK IKE E +NK KPIW R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQL
Sbjct: 249 KKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQL 308
Query: 186 EFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLP 365
EF+A+LFVP+RAPFDLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLP
Sbjct: 309 EFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLP 368
Query: 366 LNISREMLQQNKILKVI*KESGKE 437
LNISREMLQQNKILKVI K K+
Sbjct: 369 LNISREMLQQNKILKVIRKNLVKK 392
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 209 bits (510), Expect = 9e-55
Identities = 94/121 (77%), Positives = 112/121 (92%)
Frame = +3
Query: 75 RNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRK 254
R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ +K++
Sbjct: 18 RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQ 77
Query: 255 NNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVI*KESGK 434
NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKILKVI K K
Sbjct: 78 NNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVK 137
Query: 435 E 437
+
Sbjct: 138 K 138
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 158 bits (384), Expect = 2e-39
Identities = 77/144 (53%), Positives = 105/144 (72%), Gaps = 4/144 (2%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDH--LAVKHFSVEG 179
+ KT+KE TE E LN K IW R+ ++T+EEY FY SL D+ D L+ HF+ EG
Sbjct: 355 KTKTVKETTTEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEG 414
Query: 180 QLEFRALLFVPRRAPFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDS 353
+EF+ALLFVP +AP DL+E+ K+N+KLYVRRVFI D ++L+P+YL+F++G+VDS
Sbjct: 415 DVEFKALLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDS 474
Query: 354 EDLPLNISREMLQQNKILKVI*KE 425
+ LPLN+SREMLQQ+ LK I K+
Sbjct: 475 DTLPLNVSREMLQQHSSLKTIKKK 498
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 151 bits (365), Expect = 3e-37
Identities = 72/142 (50%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+KKTI EKY + E N+TKPIW RN ++ + EY +FYK N++ D LA HF+ EG++
Sbjct: 332 KKKTITEKYWDWELANETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEV 391
Query: 186 EFRALLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSE 356
EFR++L++P AP E N K K NI+LYV+RVFI D+ + +L P YL+F++GVVDS
Sbjct: 392 EFRSVLYIPGMAPLSNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSN 450
Query: 357 DLPLNISREMLQQNKILKVI*K 422
DLPLN+SRE+LQ+++I++++ K
Sbjct: 451 DLPLNVSREILQESRIVRIMRK 472
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 149 bits (362), Expect = 7e-37
Identities = 68/140 (48%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+ KT+ EKY + E N+T+PIW RN +++ EEY +FYK N++ D LA HF+ EG++
Sbjct: 595 KTKTVVEKYWDWELTNETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPLASSHFTTEGEV 654
Query: 186 EFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDL 362
EFR++L+VP D+ + K + NI+LYV+RVFI D+ + +L P YL+F+RGVVDS DL
Sbjct: 655 EFRSILYVPATKKEDITDRKTK--NIRLYVKRVFISDDFDGELFPRYLSFVRGVVDSNDL 712
Query: 363 PLNISREMLQQNKILKVI*K 422
PLN+SRE+LQ+++I++++ K
Sbjct: 713 PLNVSREILQESRIVRIMRK 732
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 149 bits (361), Expect = 1e-36
Identities = 72/142 (50%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Frame = +3
Query: 6 RKKTIKEKYTEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQL 185
+KKTI EKY + E N+TKPIW R+ +I + EY +FYK N++ D LA HF+ EG++
Sbjct: 582 KKKTITEKYWDWELANETKPIWMRSPKEIEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEV 641
Query: 186 EFRALLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSE 356
EFR++L++P AP E N K K NI+LYV+RVFI D+ + +L P YL+F++GVVDS
Sbjct: 642 EFRSVLYIPGMAPLSNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSN 700
Query: 357 DLPLNISREMLQQNKILKVI*K 422
DLPLN+SRE+LQ+++I++++ K
Sbjct: 701 DLPLNVSREILQESRIVRIMRK 722
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 140 bits (339), Expect(2) = 2e-34
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 174 EGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDS 353
EGQLEF+A+LFVP+ APFD+F+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F+ GVVD
Sbjct: 553 EGQLEFKAILFVPKGAPFDIFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVEGVVDY 612
Query: 354 EDLPLNISREMLQQNKILKVI*KESGKE 437
EDLPLNIS E+LQQNKILKVI K K+
Sbjct: 613 EDLPLNISFELLQQNKILKVIRKNLVKK 640
Score = 22.2 bits (45), Expect(2) = 2e-34
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 12 KTIKEKYTEDEELNKTKPIWTRNAD 86
K IKE E +NK + IW R ++
Sbjct: 529 KKIKEVCHECNLINKQEAIWMRKSE 553
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 30.3 bits (65), Expect = 0.73
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 69 WTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFS 170
W NAD +T+ EYG + SL N+ + A+ H S
Sbjct: 237 WNPNADTMTRNEYGVWEISLPNNADGSPAIPHGS 270
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 84 DDITQEEYGDFYKSLTNDWEDHLAVK 161
DD+ E+Y F+K+ DW D +K
Sbjct: 619 DDMDAEDYSKFFKTELRDWSDEDLIK 644
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 231 DQMEPC-EVQRVKHGIPTDLLRRSVLQQDDPPSHWSEICRNL 109
D E C E+ R G+P ++ S L + P WSE+ R++
Sbjct: 357 DLEEVCDEILRKCEGVPLAIVTTSSLLESKPREDWSELYRSI 398
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 27.5 bits (58), Expect = 5.1
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 75 RNADDITQEEYGD-FYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKR 251
R A ++ ++G Y LT + EDHL S+E L+ + R+ D + +
Sbjct: 53 RTAYNLVLHKHGPKLYDKLTENMEDHLQEMRVSIEAAQGGLFLVELQRKWD-DHNKALQM 111
Query: 252 KNNIKLYVRRVFIMDN 299
+I +Y+ RVFI N
Sbjct: 112 IRDILMYMDRVFIPTN 127
>01_07_0022 -
40543912-40544004,40545060-40545229,40545850-40545971,
40549272-40550909,40553212-40553720
Length = 843
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 213 EVQRVKHGIPTDLL-RRSVLQQDDPPSHWSEICRNLRT 103
++ ++ G+P ++ VL+ +PP+ W E+ L T
Sbjct: 389 KIFQITRGLPLSIVVLAGVLRSKEPPAEWDEVMSQLAT 426
>07_01_1094 + 10050988-10051177,10052128-10052591
Length = 217
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 90 ITQEEYGDFYKSLTNDWEDHL 152
+TQEE+ DFY +TN DHL
Sbjct: 35 VTQEEFPDFYFRVTN--SDHL 53
>02_05_0587 +
30162806-30163183,30163315-30163478,30163571-30163654,
30163737-30163794,30164092-30164145,30164244-30164309,
30164310-30164381,30164547-30164627,30165361-30165533,
30165916-30166018,30166148-30166279,30166432-30166554,
30166898-30167002,30167397-30167722,30167919-30168258,
30169973-30170113,30170589-30170801,30170901-30171119,
30171272-30171619,30171711-30172043,30172548-30172601
Length = 1188
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 285 FIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILK 410
FI+D CE I +Y F+ G S L L+ + + + +LK
Sbjct: 438 FILDCCESNIAKYTKFLEG--SSGSLQLSTNSKQANRTLLLK 477
>01_05_0327 + 20984336-20985478
Length = 380
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 213 EVQRVKHGIPTDLLRRSVLQQDDPPSHWSEICRNLRTPP 97
+ +R+ +P D L +L QDDPPS + PP
Sbjct: 33 KAKRLDPSLPIDHLLDPLLNQDDPPSSSASSSSPQAPPP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,169,389
Number of Sequences: 37544
Number of extensions: 223533
Number of successful extensions: 617
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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