Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P01
         (221 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   0.68 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   1.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   2.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   6.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    19   8.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 0.68
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 124 YRYIDIKTVDCIF-LRNRINYLLKMILFKSTFI 29
           +  I I+T++ +   R   N +L  +LF  TFI
Sbjct: 66  FELIQIRTINFVATFRTIANIILMAVLFLGTFI 98


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 1.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 200 ISIRDANEINR*CVR*QLKMLCRY 129
           + + + N   R CV+  + M CRY
Sbjct: 36  VLLNEDNPCARKCVKDSVPMTCRY 59



 Score = 20.2 bits (40), Expect = 2.8
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2

Query: 148 SKCCVDILYRYIDIKTVDCI 89
           SK C D  Y   D    DCI
Sbjct: 70  SKACYDCPYNTQDCYREDCI 89


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 175 STASACDNNSKCCVD 131
           S+ S C NN +C ++
Sbjct: 37  SSISECKNNGECVIN 51


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -2

Query: 178 KSTASACDNNSKC 140
           K  +S+C N ++C
Sbjct: 41  KQNSSSCGNGNRC 53


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 18.6 bits (36), Expect = 8.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 204 NYIDTRRQ*NQPL 166
           NY D ++Q N P+
Sbjct: 82  NYCDNKQQANPPI 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,961
Number of Sequences: 336
Number of extensions: 496
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  3009020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)