Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_P01
         (221 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   4.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   5.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   5.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   5.5  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -3

Query: 195 DTRRQ*NQPLVRAITTQNAVSIFCIDIS 112
           DT  + N      +   N   +FC D+S
Sbjct: 325 DTNTELNPNTFILVAENNTTMVFCNDLS 352


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 151 NSKCCVDILYRYIDIKTVDCIFLRNRINYLLKMIL 47
           ++KC     Y YI + T+    +   I YL K  L
Sbjct: 632 STKCPYPSYYSYIGVLTLVATSMPTYICYLGKAYL 666


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 103 TVDCIFLRNRINYLLKMILFKSTFIL 26
           T+D IFL      LL+   FK T IL
Sbjct: 350 TIDGIFLPKHPLDLLREADFKDTEIL 375


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 103 TVDCIFLRNRINYLLKMILFKSTFIL 26
           T+D IFL      LL+   FK T IL
Sbjct: 350 TIDGIFLPKHPLDLLREADFKDTEIL 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,721
Number of Sequences: 438
Number of extensions: 684
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3407265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)