Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O24
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.8  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   5.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 90  DFQCVLVYIFCQSSHPSKHKN 152
           DFQ  + Y F + +HP  HK+
Sbjct: 425 DFQYYVSYDFYKMNHPVYHKD 445


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 187 WLQGRSILRHTAFLCFEGCDD 125
           WL   S   H A L  EGC++
Sbjct: 37  WLAAASGAPHPAALPIEGCNE 57


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 187 WLQGRSILRHTAFLCFEGCDD 125
           WL   S   H A L  EGC++
Sbjct: 37  WLAAASGAPHPAALPIEGCNE 57


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 47   TNHYRIKSVTST 82
            TNH++ K+ TST
Sbjct: 1180 TNHWQTKTTTST 1191


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 88 VFS*CNTFYSVMVCDLYTFS 29
          VFS   TF+S  +C L  ++
Sbjct: 38 VFSFAVTFFSAWICALVNYN 57


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -1

Query: 429 GITNDEGTEYRSNTRSGSSYSNCRCASTNEFGSR 328
           G  + +G E ++N       S  +C+   + GSR
Sbjct: 52  GKCSPDGQELKNNLADALQTSCSKCSQRQQDGSR 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,931
Number of Sequences: 336
Number of extensions: 2728
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)