Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O23
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          27   0.080
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.32 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   5.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.9  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   9.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 0.080
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 330 DVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIK 428
           ++   P   WK  DSSKK  RY   R+V+D I+
Sbjct: 220 EIEDEPDHKWKKNDSSKKKTRYY-YRSVDDVIE 251


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 283 SLKSTRQPTTGRNLSTTCLVSQPSTGNLR 369
           SLK   Q T G  LS   ++S P+T  L+
Sbjct: 125 SLKPGNQSTPGIKLSINIILSDPNTNKLK 153


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 387 VRYNGGRAVEDFIKYV 434
           V YNG   V D ++YV
Sbjct: 21  VMYNGNNNVTDLVEYV 36


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 527 VLFSLILQFFICLL 486
           +L +++L FFICLL
Sbjct: 293 MLGTVVLAFFICLL 306


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 263 QLFTQLFPDW 234
           QL  QL+PDW
Sbjct: 537 QLHMQLYPDW 546


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 263 QLFTQLFPDW 234
           QL  QL+PDW
Sbjct: 429 QLHMQLYPDW 438


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 418 TSSNTYLNKPVANSRAGT 471
           T  N Y N P+ ++ AGT
Sbjct: 411 TIGNDYYNSPLYHTSAGT 428


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -1

Query: 498 HLSSWHCPFCPSP*VRYWLVQ 436
           H     C  CP    R WL+Q
Sbjct: 4   HTLPCKCTICPKAFSRPWLLQ 24


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 165 TDSDRDALVEFYAPWCGH 218
           T++  D ++ F+A W G+
Sbjct: 19  TEAKTDKILCFFASWAGY 36


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 132 VAVGKNFKELVTDSDRDALVEFYAP 206
           V +GK  K+ V D   D L + Y P
Sbjct: 17  VFIGKGSKKTVFDIPNDYLNDKYKP 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,544
Number of Sequences: 336
Number of extensions: 2442
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)