Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O23
(540 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 142 2e-34
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 134 3e-32
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 106 1e-23
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 81 4e-16
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 66 2e-11
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 61 5e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 56 2e-08
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 54 1e-07
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 53 1e-07
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 53 2e-07
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 51 5e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 44 8e-05
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 39 0.003
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 36 0.016
SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06) 36 0.028
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 34 0.065
SB_35384| Best HMM Match : PRA1 (HMM E-Value=6.7) 34 0.065
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 33 0.11
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 0.60
SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) 31 0.60
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 30 1.4
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_40069| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 28 5.6
SB_32988| Best HMM Match : F5_F8_type_C (HMM E-Value=2e-25) 28 5.6
SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_23703| Best HMM Match : TTL (HMM E-Value=0) 27 7.4
SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24) 27 7.4
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 27 7.4
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 27 7.4
SB_6215| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 27 9.8
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 27 9.8
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 27 9.8
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 27 9.8
SB_51790| Best HMM Match : TTL (HMM E-Value=0) 27 9.8
SB_40710| Best HMM Match : RVT_1 (HMM E-Value=1.7e-25) 27 9.8
SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2) 27 9.8
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 145 bits (352), Expect = 2e-35
Identities = 70/149 (46%), Positives = 100/149 (67%), Gaps = 1/149 (0%)
Frame = +3
Query: 15 KSEFSIENLVAFAKDLIGGKLEPFVKSEAVPESNDGPVKVAVGKNFKELVTDSDRDALVE 194
+ EFS ++L F ++ G L+P +KS+ VP+SN PV V VGK F E+V D +D L+E
Sbjct: 490 EEEFSEDSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIE 549
Query: 195 FYAPWCGHCQKLTPIWEELGEKLK-DEDVDIVKIDATANDWPKSQYDVSGFPTIYWKPKD 371
FYAPWCG L P +++LG+ + D+++ I KIDATAND P S Y V GFPTIY+
Sbjct: 550 FYAPWCGIA--LEPTFKKLGKHFRNDKNIVIAKIDATANDVP-STYAVEGFPTIYFATSK 606
Query: 372 SSKKPVRYNGGRAVEDFIKYVSEQASSEL 458
K P++++GGR ++D IK+V E+A+ L
Sbjct: 607 DKKNPIKFDGGRELKDLIKFVEEKATVSL 635
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = +3
Query: 93 SEAVPESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLK-- 266
S+ V E +D V V KNF ++ +++ LVEFYAPWCGHC+ L P + + +K+K
Sbjct: 54 SDEVKEEDD--VSVLNSKNFDRVIEENNI-ILVEFYAPWCGHCKSLAPEYAKAAKKMKLN 110
Query: 267 DEDVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYVSEQA 446
D V K+DAT ++DVSG+PT+ K + P Y G R ++Y+ +Q+
Sbjct: 111 DPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGT---PYEYEGPREESGIVEYMKKQS 167
Query: 447 SSELK 461
K
Sbjct: 168 DPNWK 172
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +3
Query: 84 FVKSEAVPESNDGPVKVAV--GKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGE 257
++K ++ P PV +NF E+V + + LVEF+APWCGHC++L P +E+ +
Sbjct: 162 YMKKQSDPNWKPPPVAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQ 220
Query: 258 KLKDED--VDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKY 431
+L+ D + + +DAT +Y+V G+PT+ K K Y G R Y
Sbjct: 221 ELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKG---KATEYKGQRDQYGIASY 277
Query: 432 VSEQ 443
+ Q
Sbjct: 278 MRSQ 281
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 142 bits (343), Expect = 2e-34
Identities = 63/112 (56%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +3
Query: 9 VMKSEFSIENLVAFAKDLIGGKLEPFVKSEAVPESNDGPVKVAVGKNFKELVTDSDRDAL 188
+MK +FS+++ F +D G L+P +KSE +PESNDGPVKV VG+NFKE+V D +D L
Sbjct: 825 LMKEKFSVDSFKQFLEDYFAGSLKPHIKSEPLPESNDGPVKVVVGENFKEIVNDPTKDVL 884
Query: 189 VEFYAPWCGHCQKLTPIWEELGEKLKD-EDVDIVKIDATANDWPKSQYDVSG 341
+EFYAPWCGHC+ L P + ELGEKL+D +D+ I K+DATAND P + + V G
Sbjct: 885 IEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATANDAPPN-FSVQG 935
Score = 73.7 bits (173), Expect = 9e-14
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Frame = +3
Query: 147 NFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDED--VDIVKIDAT-ANDWP 317
NFK V D LVEF+APWCGHC++L P +E E LK D V + K+D T A
Sbjct: 547 NFKSGVAGKDI-MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDT 605
Query: 318 KSQYDVSGFPTI-YWKPKDSSKKPVRYNGGRAVEDFIKYVSEQA---SSELKGWD 470
S+Y VSG+PT+ ++ + SK Y+G R I+Y+ +QA S E+K D
Sbjct: 606 CSKYGVSGYPTLKIFRNGEMSKD---YDGPRDSSGIIRYMKKQAGPSSVEIKSVD 657
Score = 35.9 bits (79), Expect = 0.021
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 342 FPTIYWKPKDSSKKPVRYNGGR 407
FPTIYW P ++ + P +Y GGR
Sbjct: 981 FPTIYWAPANNKENPEKYEGGR 1002
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 134 bits (325), Expect = 3e-32
Identities = 64/141 (45%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Frame = +3
Query: 18 SEFSIENLVAFAKDLIGGKLEPFVKSEAVPESNDG-PVKVAVGKNFKELVTDSDRDALVE 194
+E + EN+ F + + KL+P + S +PE D PVKV GKNF E+ + D++ VE
Sbjct: 349 AEITSENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVE 408
Query: 195 FYAPWCGHCQKLTPIWEELGEKLKDE-DVDIVKIDATANDWPKSQYDVSGFPTIYWKPKD 371
FYAPWCGHC++L PIW++LGEK KD D+ + K+D+TAN+ V FPTI + PK+
Sbjct: 409 FYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKE 466
Query: 372 SSKKPVRYNGGRAVEDFIKYV 434
+ V YNGGR ++DF+K++
Sbjct: 467 G--EAVDYNGGRTLDDFVKFL 485
Score = 84.6 bits (200), Expect = 5e-17
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Frame = +3
Query: 93 SEAVPESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDE 272
SE + E D V V KNF E V +++ LVEFYAPWCGHC+ L P + + +LK E
Sbjct: 17 SEEIKEEED--VLVLTEKNFDEAVA-ANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSE 73
Query: 273 --DVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYVSEQA 446
++ + K+DATA ++ V G+PTI + KD KP Y GGR + + +++++
Sbjct: 74 KSEIKLAKVDATAETKLGEKFQVQGYPTIKFF-KDG--KPSEYAGGRTAPEIVSWLNKKT 130
Query: 447 SSELK 461
K
Sbjct: 131 GPPAK 135
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 106 bits (254), Expect = 1e-23
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Frame = +3
Query: 147 NFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEK-LKDEDVDIVKIDATANDWPKS 323
NF E+V + ++ ALVEFYAPWCGHC++L P +E+LGE + DV I K+DA + S
Sbjct: 31 NFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGS 89
Query: 324 QYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYVSEQ 443
++DV GFPTI + PK S+ P YNGGR + DFIK++ E+
Sbjct: 90 RFDVKGFPTIKYFPKGST-TPEEYNGGRDINDFIKFIEEK 128
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 147 NFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKSQ 326
NF++ V +S LVEF+APWCGHCQ+L P W + +LK + V + +DAT + S+
Sbjct: 88 NFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGK-VKVGALDATVHTVTASR 146
Query: 327 YDVSGFPTI--YWKPKDSSKKPVRYNGGRAVEDFIKYVSEQASSELK 461
Y V G+PTI + +S Y GGR D I+Y ++A+ ++
Sbjct: 147 YQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIE 193
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 99 AVPESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDV 278
A E + VK G +F + +++ LV FYAPWCGHC+ P +E+ E KD+
Sbjct: 140 ASAEEDSSLVKQLDGSDFWGYLNNTEH-VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPN 198
Query: 279 DI-VKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYVSE 440
+ K+D T + +V+G+PT+ + K V Y+G R ED I ++ E
Sbjct: 199 RVFAKLDCTKFGDVCDKEEVNGYPTLRYYL--YGKFVVEYDGDRVTEDLISFMEE 251
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = +3
Query: 114 NDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDV--DIV 287
+D V ++ E + S + LV ++APWCGHC ++ P + + + L DED ++
Sbjct: 48 DDSKVVFLTDESHDEFIK-SHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLA 106
Query: 288 KIDATANDWPKSQYDVSGFPTI-YWKPKDSSK 380
+D T + + ++G+PT+ +K +++K
Sbjct: 107 AVDCTKHKDVAKKVALAGYPTVKLYKASNTAK 138
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +3
Query: 147 NFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKD-EDVDIVKIDATANDWPKS 323
+F ++V ++D+D L+ FY PWCG C P+ + +D V + +IDA ND P +
Sbjct: 526 SFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQNDLPWN 585
Query: 324 QYDVSGFPTIYWKPKDSSKKPVRY--NGGRAVEDFIKYVSEQASSELK 461
VS +P+I P + + N R I+++ E S L+
Sbjct: 586 -LTVSSYPSIILFPAGRKDSSIAFPSNTPRTATRLIEFIEEHGSEALR 632
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Frame = +3
Query: 93 SEAVPESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEK---L 263
S+ VP+ D P + + + E + LV+FYAPWC HC+K+ P ++++ ++ L
Sbjct: 126 SDGVPD--DEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLIL 183
Query: 264 KDEDVDIVKIDATANDWPK----SQYDVSGFPTIYWKPKDSSKKPVRYN--GGRAVEDFI 425
V + K+D +AN+ +Y+V PTIY + N ++++ F+
Sbjct: 184 SHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIKGFV 243
Query: 426 KYVSEQASSELKGWDRKGNAKKTNEE 503
++A +K D K N++
Sbjct: 244 MDAVKEADPSMKFSDVPKKKKMKNQK 269
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 99 AVPESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDED 275
A P+ V +NF E + ++ LV+FYAPWC CQ+L+P+++ +L+D +
Sbjct: 44 AAPDPASPAVLNLNDQNFNETIKKNEY-VLVDFYAPWCSDCQRLSPLFDTAALQLRDNN 101
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 189 VEFYAPWCGHCQKLTPIWEELGEKLKDE-DVDIVKID 296
V+FYAPWC HC KL PIWE L E KD D+ I KI+
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKDNADITISKIN 147
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 228 LTPIWEELGEKLKDE--DVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNG 401
+ P WE LGE+ E D+ I K+D T++ + ++ +PT+ K RY G
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIK---RYTG 57
Query: 402 GRAVEDFIKYVSE 440
R ED +V +
Sbjct: 58 RRNAEDMKVFVDK 70
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/106 (26%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +3
Query: 144 KNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKD-EDVDIVKIDATANDWPK 320
+N E V D + + FYAPW HCQ++ I++++ ++ D +D+ + K +A +
Sbjct: 34 ENVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIA 92
Query: 321 SQYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYVSEQASSEL 458
++Y + +P + K S+ + Y+GG +DFI++++ ++ +L
Sbjct: 93 TRYWIDRYPMFRYFIKGSTTEET-YDGGFKPDDFIRFIAARSYLKL 137
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 87 VKSEAVPESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLK 266
VK + P S+ V + + + + LV FYAPWCGHC+ + P + + + LK
Sbjct: 70 VKEDEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLK 129
Query: 267 DEDVD--IVKIDATANDWPKSQYDVSGFPT 350
++++ + +DAT ++ V G+PT
Sbjct: 130 EQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 150 FKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDED 275
FK V + LV FYAPWCGHC+K P + KD++
Sbjct: 205 FKSFVKKK-KHVLVMFYAPWCGHCKKAKPELMSAAKHHKDKN 245
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = +3
Query: 147 NFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDED 275
NFK V D LVEF+APWCGHC++L P +E E LK D
Sbjct: 22 NFKSGVAGKDI-MLVEFFAPWCGHCKRLAPEYETAAEALKKND 63
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/109 (25%), Positives = 48/109 (44%)
Frame = +3
Query: 108 ESNDGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIV 287
ES V ++F VT R V+F+APWC C +L P + + + V
Sbjct: 280 ESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFG 339
Query: 288 KIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYV 434
+D T + QY++ +PT ++ +P ++ G D I++V
Sbjct: 340 TVDCTVHSQLCHQYNIRSYPTTILY---NNSQPHQFIGHHNALDIIEFV 385
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 144 KNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKS 323
KNF V S+ +V+FYAPWCG C + P +E+L + LK + V K++ + S
Sbjct: 441 KNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGK-VRAAKVNCEQDYGLCS 499
Query: 324 QYDVSGFPTI 353
+ ++ +PT+
Sbjct: 500 EANIHSYPTV 509
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = +3
Query: 144 KNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDV-DIVKIDATANDWPK 320
+NF +++ + D LV+FYAPWC HCQ+L P E L + + K+D T P+
Sbjct: 28 QNFDQMIREKDI-MLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTD---PR 83
Query: 321 SQ-----YDVSGFPTIYWKPKDSSKKPVRYNGGRAVEDFIKYVSEQASS 452
S+ + + G+P++ K K Y G R + Y+ S+
Sbjct: 84 SKVLCDNFKIEGYPSV--KLFKFGKYAGDYIGQRTDAALVNYMESVTST 130
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/91 (28%), Positives = 40/91 (43%)
Frame = +3
Query: 156 ELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKSQYDV 335
EL + + +F A WCG C+ + P++ L EK K +KID ++ V
Sbjct: 21 ELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYK--QAVFLKIDVDVCQELAAKQGV 78
Query: 336 SGFPTIYWKPKDSSKKPVRYNGGRAVEDFIK 428
+ PT + VR +A+ED IK
Sbjct: 79 TAMPTFQFFKNKVKVDEVRGADPKALEDAIK 109
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 117 DGPVKVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDE 272
+ P+ ++F + D + LV+FYAPWC C L P +E+ L E
Sbjct: 21 ENPIFELTDQDFDNFLKDKEV-MLVDFYAPWCSDCDNLRPKYEKAARDLAKE 71
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +3
Query: 156 ELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKSQYDV 335
E+ R +++F A WCG C+ + P++ L +K DV +K+D +
Sbjct: 22 EIERAGSRLVVIDFTATWCGPCKSIAPVFTNL--SMKFMDVVFLKVDVDQCQLTAESCGI 79
Query: 336 SGFPTIYWKPKDSSKKPVRYNGGRAVEDFIK 428
PT ++ + +R A+E+ IK
Sbjct: 80 RAMPTFHFYHNKAKIDELRGADPGALENKIK 110
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 150 FKELVTDS-DRDALVEFYAPWCGHCQKLTPIWEELG-EKLKDEDVDIVKID 296
F ++ ++ D+ +++FYA WCG C+++ P ++++ E+ K DV KID
Sbjct: 21 FNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFK--DVFFAKID 69
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 150 FKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATAN 308
F + + D++ A ++F A WCG C+ + P +EE+ ++ K V K+D N
Sbjct: 4 FDKFLKDNEV-AAIDFTATWCGPCRMIGPKFEEMAKEFK--GVKCAKVDVDVN 53
>SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06)
Length = 1532
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -2
Query: 272 LIFQLFTQLFPDWRQFLTVSAPRRVELDE 186
++F LF QLF D + FLTVS R+EL+E
Sbjct: 1467 ILFNLFEQLFDDVQNFLTVSVVPRMELEE 1495
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 34.3 bits (75), Expect = 0.065
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 159 LVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEK 260
L + S+ A+V F+APW HC ++ + EEL ++
Sbjct: 16 LSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKE 49
>SB_35384| Best HMM Match : PRA1 (HMM E-Value=6.7)
Length = 654
Score = 34.3 bits (75), Expect = 0.065
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -2
Query: 272 LIFQLFTQLFPDWRQFLTVSAPRRVELDESVPVAVGDQLLEVL 144
++F LF QLF D + FLTVS R+EL E + LL L
Sbjct: 13 ILFNLFEQLFDDVQNFLTVSVVPRMELLECNYIVQASNLLNGL 55
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 189 VEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKI 293
V F A WC C++ TPI ++ E+L E+ D+V I
Sbjct: 30 VYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVII 64
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 31.1 bits (67), Expect = 0.60
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 189 VEFYAPWCGHCQKLTPIWEEL-GEKLKD-EDVDIVKIDATANDWPKSQY 329
+ F A WC CQK TP+ ++ EK++ E +IV + + D Y
Sbjct: 159 IYFSASWCPPCQKFTPLLKDFYEEKIQSKEQFEIVFVSSDKTDSDLDSY 207
>SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014)
Length = 351
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 PIWEE-LGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKK 383
P WEE +GE L D+ D K+D +D ++ +V P + K K S +K
Sbjct: 209 PTWEEEMGEGLFDDKSDDDKVDDDDDDDEDNEEEVMNGPILRSKQKTSQQK 259
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 283 SLKSTRQPTTGRNLSTTCLVSQPSTGNLRTA---PRNQSDTMVVAL*KTSS-NTYLNKPV 450
SLK++ T LSTT L+S PST NL+ + P S T +++L T S N P
Sbjct: 129 SLKASSNTPTA--LSTTSLMSLPSTSNLKASSNTPTALSTTSLMSLPSTPSLEASSNTPT 186
Query: 451 ANS 459
A S
Sbjct: 187 ALS 189
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 201 APWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTI 353
A WC C+ LTP + + + +D VD+ K+D + V+ PT+
Sbjct: 46 ACWCNPCKVLTPRLDAIIAE-QDGKVDLAKVDIDVMGELAFNFGVNAVPTV 95
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 207 WCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTI 353
WC C+ LTP + + + +D VD+ K+D + V+ PT+
Sbjct: 2 WCNPCKVLTPRLDAIIAE-QDGKVDLAKVDIDVMGELAFNFGVNAVPTV 49
>SB_40069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 314 PVVGCRVDFNDIHILIFQLFTQLFPDWRQFLTVSAPRRVELDESVP 177
P+ CRV + +H++IF ++L D F +A R + DE P
Sbjct: 37 PMTPCRVTTSHVHLMIFVSESRLVVDGSHFAVTAAVRPL-TDERAP 81
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -3
Query: 196 NSTRASRSLSVTSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRSFAKATRFSMLNSD 17
N T +SLS TSS+ + PS ++ KGS+ PP R + F ++ +
Sbjct: 731 NGTDFGKSLSSTSSISRTSLRSTVRPSASRRQSAMYVKGST-PPTRRTTSSAAFFIVGDE 789
Query: 16 F 14
F
Sbjct: 790 F 790
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 233 RQFLTVSAPRRVELDESVPVAVGDQLLEVLTDCHFNWAIVTLRHRFGFDERLEFTTDEVF 54
++F V+ P R+ + + V + L L D WA L + FGF EFT D +
Sbjct: 163 KRFRGVNPPSRLPVTDEVTNIIHYHLDLGLPDHLIFWAACYLAY-FGFLRASEFTVDSLK 221
Query: 53 RESDQ 39
R S Q
Sbjct: 222 RFSSQ 226
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 189 VEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTIY 356
V FYAPWCG ++ + + L V + I+ A + +Y + FP +
Sbjct: 457 VFFYAPWCGQSRRAVEEF-NIAASLLYGKVTFIAINCWAGSC-REKYTLDSFPKFF 510
>SB_32988| Best HMM Match : F5_F8_type_C (HMM E-Value=2e-25)
Length = 180
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 321 SQYDVSGFPTIYWKPKDSSKKPVRYNGG 404
SQ S F IYW PKD+ + YN G
Sbjct: 41 SQITASSFVDIYWSPKDARMRN-PYNSG 67
>SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 189 VEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDATAN 308
+E P+C Q T + E L + K EDVD ++D +
Sbjct: 479 IEASTPFCILAQNCTKLQETLPKIAKKEDVDETRVDVNTS 518
>SB_23703| Best HMM Match : TTL (HMM E-Value=0)
Length = 657
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 181 SRSLSVTSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRSFAK 47
S+ + +S K P A PS T S + +SLPP+R+ ++
Sbjct: 480 SKKIVSRTSTKLKPAAPKGFPSARRNTISGQPRNTSLPPLRATSR 524
>SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)
Length = 465
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 284 DIHILIFQLFTQLFPDWRQFLTVSAPRRVELDE 186
DI+ ++ L T PD R+FL++ P+ + ++
Sbjct: 121 DIYTILIPLITFFSPDVREFLSLDNPKNAQAND 153
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 536 LWKVLFSLILQFFICL-LGIALSVPALEFATGLFRYVFDEVFYSA 405
+WK ++F +C G+ +S+PA + + VF+ +F+ A
Sbjct: 438 MWKNPVLSDVEFLVCTSAGVKISIPAHRYVLAVSSPVFEAMFHGA 482
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 348 LGNQTRRTEISASRWLSRRF*RYPHPHLSTFHP 250
LGN R T IS W RYP P L+ F P
Sbjct: 447 LGNPIRSTAISLVEW------RYPFPTLAAFQP 473
>SB_6215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +3
Query: 144 KNFKELVTDSDRDALVEFYA--PWC 212
K E+VTDSD D EF+A P+C
Sbjct: 45 KEESEIVTDSDEDQAKEFFAKDPFC 69
>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
Length = 1020
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 292 STRQPTTGRNLSTTCLVSQPSTGNLRTAPRNQSDTMVVAL*KTSSNTYLNKPVANSRAG 468
STR P T TT + PST ++ +P S T + T+S T + KP N+ G
Sbjct: 322 STRHPLTSITTRTTPIKPSPSTTPIKPSP---STTPIKPSPSTTSTTPI-KPSPNTTPG 376
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 207 WCGHCQKLTPIWEELGEKLKDEDVDIVKIDATANDWPK-SQYDVSG--FPTIYWKPKDS 374
WCG C+ L P + E +++ V + N+ P ++ V G P IY+ DS
Sbjct: 8 WCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPDGDEFRVDGRYIPRIYFMDPDS 65
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 295 TRQPTTGRNLSTTCLVSQPSTGNLRTAPRNQSDTMVVAL*KTSSNTYLNKPVANSR 462
TR P + T + P T + T P QS T + +T S T +P R
Sbjct: 226 TRDPVNNTDTETQSTTTTPETQSTTTTPETQSTTEIP---ETQSTTTTPRPSQQQR 278
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 129 KVAVGKNFKELVTDSDRDALVEFYAPWCGHCQKLTPIWEELGEKLKDEDVDIVKIDA-TA 305
KV K+ +L T+++ + + +A H Q +T +W + D V +VK D +
Sbjct: 679 KVKHDKDVLDLWTETN-NTKTDVHAQKVKHDQDVTDLWAAINNTKTDVQVQVVKHDQDVS 737
Query: 306 NDWPKSQYDVSG 341
N W + SG
Sbjct: 738 NLWITTNSTKSG 749
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +3
Query: 240 WEELGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNG-GRAVE 416
WEE+GE ++E V + D + P Q K K K + G G++
Sbjct: 110 WEEIGEDFQEECVVEISSDTESEQEPDPQSQSQSKGKGKGKGKGKGKGKGKVQGQGQSQS 169
Query: 417 DFIKYVSEQASSELKGWDRKGNAKKTNEE 503
Q+ S+ + + + +NEE
Sbjct: 170 QSQSQSQSQSQSQSQSKSSQSSTMSSNEE 198
>SB_51790| Best HMM Match : TTL (HMM E-Value=0)
Length = 536
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 181 SRSLSVTSSLKFLPTATLTGPSLLSGTASDLTKGSSLPPMRS 56
S+ + +S K P A PS T S + +SLPP+R+
Sbjct: 480 SKKIVSRTSTKLKPAAPKGFPSARRNTISGQPRNTSLPPLRA 521
>SB_40710| Best HMM Match : RVT_1 (HMM E-Value=1.7e-25)
Length = 736
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 243 EELGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDS 374
EE+ +LK +D V + N WP+++ + G YW + S
Sbjct: 465 EEIRSELKRDDALKVVMHYVQNGWPETKQKLYGPVKKYWGERGS 508
>SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)
Length = 845
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +3
Query: 240 WEELGEKLKDEDVDIVKIDATANDWPKSQYDVSGFPTIYWKPKDSSKKPVRYNG-GRAVE 416
WEE+GE ++E V + D + P Q K K K + G G++
Sbjct: 110 WEEIGEDFQEECVVEISSDTESEQEPDPQSQSQSKGKGKGKGKGKGKGKGKVQGQGQSQS 169
Query: 417 DFIKYVSEQASSELKGWDRKGNAKKTNEE 503
Q+ S+ + + + +NEE
Sbjct: 170 QSQSQSQSQSQSQSQSKSSQSSTMSSNEE 198
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,474,826
Number of Sequences: 59808
Number of extensions: 323306
Number of successful extensions: 1162
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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