Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O22
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.60 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -3

Query: 522 VSVWLQILKLQGRKSADIRKYSTLKTIVFYYEKLKIIIADLHPLXXXXXXXX*PLSYRDF 343
           +S+  Q+  L    SA+    +T+   +FY  KL  +I+ LH L           SY+  
Sbjct: 71  LSIVTQLADLIFSASANASGVATVFFCLFYQNKLIEVISKLHKLDNKLKHMLIWKSYKRT 130

Query: 342 SLSIT 328
            + IT
Sbjct: 131 QIFIT 135


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 500 KICSQTLTGVSRQY*EPVP 556
           K   QTL G S +  EPVP
Sbjct: 376 KAIHQTLGGSSNEIVEPVP 394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,867
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)