Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O21
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    26   0.14 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.32 

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 101 LKLRCTLERDVWSDHTFRACLARFYSVMFSSCNLIQYFAIFDYLLCNFGGVLRHIV 268
           L ++C +   ++   +F A L +FY   +S+      F + D+ LC    +L H +
Sbjct: 46  LLIQCYIAVSIFGSSSFEADLRQFYKTAYSA-----IFTVIDFSLCK--AILVHAI 94


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.32
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 317 SLRVIIYT*LHLCIIITLYDVKRH--QNYIINS 225
           SLR  +YT +H+ III LY    +  +N+I  S
Sbjct: 22  SLRFKLYTIVHIFIIIALYAHSSYGRENFIYGS 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,606
Number of Sequences: 336
Number of extensions: 2073
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)