Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O20
(540 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 192 4e-48
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 192 6e-48
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 181 8e-45
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 142 5e-33
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 135 5e-31
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 133 2e-30
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 118 9e-26
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 116 5e-25
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 108 9e-23
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 105 5e-22
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 103 3e-21
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 4e-20
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 95 7e-19
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 95 9e-19
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 93 3e-18
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 93 5e-18
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 92 6e-18
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 91 2e-17
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 78 1e-13
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 77 2e-13
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 73 3e-12
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 71 1e-11
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 71 2e-11
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 71 2e-11
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 67 2e-10
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 64 1e-09
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 64 3e-09
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 63 5e-09
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 63 5e-09
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 1e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 61 2e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 59 7e-08
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 57 3e-07
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 57 3e-07
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 56 4e-07
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 56 7e-07
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 55 9e-07
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 46 6e-04
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 46 7e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.001
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 44 0.002
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 42 0.012
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 41 0.021
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 41 0.021
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 40 0.048
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 39 0.064
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 39 0.085
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 38 0.11
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 36 0.60
UniRef50_A7TKI3 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 2.4
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 34 2.4
UniRef50_A2R3R9 Cluster: Contig An14c0180, complete genome; n=1;... 34 2.4
UniRef50_Q4TAX5 Cluster: Chromosome undetermined SCAF7240, whole... 33 3.2
UniRef50_A5AQV5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 33 4.2
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 5.6
UniRef50_Q1DAQ7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A7HCR1 Cluster: Cobalamin (Vitamin B12) biosynthesis Cb... 33 5.6
UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein; ... 33 5.6
UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella ... 33 5.6
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 7.3
UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;... 32 9.7
UniRef50_Q8R7C9 Cluster: NADH dehydrogenase, FAD-containing subu... 32 9.7
UniRef50_Q30U01 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_A0KIW0 Cluster: Putative uncharacterized protein; n=2; ... 32 9.7
UniRef50_A5ARJ7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_Q9XJT6 Cluster: Terminase; n=2; root|Rep: Terminase - B... 32 9.7
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 192 bits (468), Expect = 4e-48
Identities = 93/129 (72%), Positives = 105/129 (81%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*T 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 SLPFRMVLL 397
PF L+
Sbjct: 180 ISPFSFGLV 188
Score = 81.8 bits (193), Expect = 9e-15
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+NISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVAS 236
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 192 bits (467), Expect = 6e-48
Identities = 91/118 (77%), Positives = 102/118 (86%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATLLNM
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNM 177
Score = 82.6 bits (195), Expect = 5e-15
Identities = 33/59 (55%), Positives = 50/59 (84%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+NISPFSYGL+++QVYD+G++++P +LDI + L ++FL GV N+A++ L IGYPT+AS
Sbjct: 181 LNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLAS 239
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 181 bits (441), Expect = 8e-45
Identities = 83/123 (67%), Positives = 104/123 (84%)
Frame = +2
Query: 14 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 193
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 194 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TS 373
V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL M
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKI 180
Query: 374 LPF 382
PF
Sbjct: 181 FPF 183
Score = 86.6 bits (205), Expect = 3e-16
Identities = 39/61 (63%), Positives = 52/61 (85%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
Q + I PF+YGL + QVYDSG++FAP+ILDI +DL ++F++G+ANVAA+SL IGYPTVA
Sbjct: 176 QMLKIFPFTYGLKIVQVYDSGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGYPTVA 235
Query: 538 S 540
S
Sbjct: 236 S 236
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 142 bits (344), Expect = 5e-33
Identities = 67/125 (53%), Positives = 92/125 (73%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
++RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 67 LIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPN 126
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*T 370
V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL
Sbjct: 127 DVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLK 186
Query: 371 SLPFR 385
PF+
Sbjct: 187 INPFK 191
Score = 53.2 bits (122), Expect = 4e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
Q + I+PF YG V+ VYD+G ++ LD+ D+ +KF GV A+SL+ PT A
Sbjct: 183 QKLKINPFKYGAVIDVVYDNGIVYDAKALDLTESDIVKKFQEGVQAATAISLAANLPTEA 242
Query: 538 S 540
+
Sbjct: 243 A 243
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 135 bits (327), Expect = 5e-31
Identities = 64/118 (54%), Positives = 89/118 (75%), Gaps = 2/118 (1%)
Frame = +2
Query: 11 MMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 184
MM+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +A
Sbjct: 60 MMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 119
Query: 185 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
P+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL
Sbjct: 120 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALL 177
Score = 72.9 bits (171), Expect = 4e-12
Identities = 29/59 (49%), Positives = 47/59 (79%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+ I PFSYGLVV+ VYD+G++F+P +LD+ + L EKF +G++ V +L+L++ YPT+A+
Sbjct: 180 LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAA 238
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 133 bits (322), Expect = 2e-30
Identities = 63/118 (53%), Positives = 88/118 (74%), Gaps = 2/118 (1%)
Frame = +2
Query: 11 MMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 184
MM+++++ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +A
Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
Query: 185 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
P+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL 178
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/59 (57%), Positives = 47/59 (79%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+ I PFSYGLVV+ VYD+G++F P +L++ +DL EKF AGV+ + ALSL+I YPTVA+
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAA 239
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 118 bits (284), Expect = 9e-26
Identities = 60/116 (51%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Frame = +2
Query: 14 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPL 190
+R A+K +L+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV AS ATLL
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLL 176
Score = 59.3 bits (137), Expect = 6e-08
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +1
Query: 367 NISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
N++P SYG+ V+ VYD G I+ +LDI ED+ EKF GV+NVAALS + G T AS
Sbjct: 180 NMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEAS 236
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 116 bits (278), Expect = 5e-25
Identities = 56/126 (44%), Positives = 82/126 (65%)
Frame = +2
Query: 5 EAMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 184
+ M+RK I+D ++ P L+ L ++K N +F + ++ +V+ + +V APA+ G A
Sbjct: 57 KTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFA 116
Query: 185 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
P V+IPA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGASEATLL
Sbjct: 117 PNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQK 176
Query: 365 *TSLPF 382
PF
Sbjct: 177 LNIKPF 182
Score = 69.3 bits (162), Expect = 5e-11
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
Q +NI PF+YGL K +YD+G ++P+I + EDL KF G+ N+AA+SL IGYPTVA
Sbjct: 175 QKLNIKPFTYGLEPKIIYDAGACYSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVA 231
Query: 538 S 540
S
Sbjct: 232 S 232
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 108 bits (259), Expect = 9e-23
Identities = 57/117 (48%), Positives = 77/117 (65%)
Frame = +2
Query: 32 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 211
D L N +EK L + GN +FT ++ + L +++VQAPAR GAIAP V++PA
Sbjct: 76 DKLLYNTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAG 133
Query: 212 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPF 382
NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S ATLL PF
Sbjct: 134 NTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPF 190
Score = 52.4 bits (120), Expect = 6e-06
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
Q ++ISPF Y + V+ V+D G +F L I + + + L G++NVAALSL G PT A
Sbjct: 183 QKLDISPFYYQVEVQSVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAA 242
Query: 538 S 540
+
Sbjct: 243 T 243
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 105 bits (253), Expect = 5e-22
Identities = 53/109 (48%), Positives = 67/109 (61%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L+ L + G VGF+FT + D++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 236 TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPF 382
FF AL IPTKI KG I+I D +LK G KVG S+A LL PF
Sbjct: 153 IQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPF 201
Score = 41.9 bits (94), Expect = 0.009
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
Q + PF YG+ V YD+G+I + + D+ KF V NV+A+SL G+ A
Sbjct: 194 QKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIVAKFQQNVRNVSAISLQNGWVNEA 253
Query: 538 S 540
S
Sbjct: 254 S 254
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 103 bits (247), Expect = 3e-21
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +2
Query: 50 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 229
P +E L+ +KGN+G +FT DL D++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 230 EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPF 382
++T+FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL PF
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPF 201
Score = 62.5 bits (145), Expect = 6e-09
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
Q +NI+PFSY L V V+D+G ++ P +LDI E + E + ++NVA++SL G PT A
Sbjct: 194 QKLNINPFSYKLSVAHVFDNGNVYGPGVLDITSESIIESYKRVISNVASVSLESGIPTRA 253
Query: 538 S 540
S
Sbjct: 254 S 254
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 4e-20
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 17 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 154
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 68.5 bits (160), Expect = 9e-11
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 397 VKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
++QVY G+IF+P ILDIKPEDLR KF GVAN+A +SL IGYPT+AS
Sbjct: 765 IEQVY--GSIFSPDILDIKPEDLRAKFQVGVANLAGVSLEIGYPTLAS 810
Score = 50.0 bits (114), Expect(2) = 4e-20
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 251 ALSIPTKISKGTIEIINDVHILKPGDKV 334
ALSIP KISKGTIEIINDV ILK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 95.5 bits (227), Expect = 7e-19
Identities = 50/111 (45%), Positives = 69/111 (62%)
Frame = +2
Query: 50 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 229
P LE L+P ++GNV +F ++ +V + E+KV A A+ G IAP V + TG+ P
Sbjct: 83 PELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYPGPTGMDP 142
Query: 230 EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPF 382
+TSFFQAL I TKI KG I+I+N++H++ KVG SEA LL PF
Sbjct: 143 SQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPF 193
Score = 64.5 bits (150), Expect = 1e-09
Identities = 27/59 (45%), Positives = 43/59 (72%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+ + PFS+GL VK VYD+G++++ +L + + L KF+ GV N+AA+SL++G PT AS
Sbjct: 188 LGVKPFSFGLKVKNVYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLGIPTAAS 246
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 95.1 bits (226), Expect = 9e-19
Identities = 53/123 (43%), Positives = 76/123 (61%)
Frame = +2
Query: 14 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 193
+R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G +A
Sbjct: 85 IRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRD 142
Query: 194 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TS 373
V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S+A LL M
Sbjct: 143 VWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNI 202
Query: 374 LPF 382
PF
Sbjct: 203 KPF 205
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+NI PF Y + + Q+Y+ G I+ +++DI ED+ ++ VAA SL G T AS
Sbjct: 200 LNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQAS 258
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 93.5 bits (222), Expect = 3e-18
Identities = 51/109 (46%), Positives = 66/109 (60%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI T GP++
Sbjct: 76 LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQ 135
Query: 236 TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPF 382
F+ AL I TKI+KG IEI+N V+++K GD V S ATLL PF
Sbjct: 136 HGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPF 184
Score = 40.7 bits (91), Expect = 0.021
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYP 528
Q + I PF Y + +YD G I+ A+L+I + K+ AG+ +L+L +P
Sbjct: 177 QRLEIDPFFYAMSALNLYDDGEIYDAAVLEIDDSVMEAKWNAGLEAFVSLALGANFP 233
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 92.7 bits (220), Expect = 5e-18
Identities = 46/129 (35%), Positives = 72/129 (55%)
Frame = +2
Query: 8 AMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 187
++MR+A+ E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP
Sbjct: 61 SLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAP 120
Query: 188 LSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM* 367
V++ T + P AL+I KI KGTIEI + ++ G KVGASEA +LN+
Sbjct: 121 CDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNIL 180
Query: 368 TSLPFRMVL 394
+PF+ L
Sbjct: 181 GIMPFKYTL 189
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+ I PF Y L ++ +YD G ++ P+IL I E L EKF G+ NV L+L++GYP AS
Sbjct: 180 LGIMPFKYTLKIEALYDHGNMYDPSILAITEEVLGEKFRTGLRNVTGLALAVGYPCAAS 238
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 92.3 bits (219), Expect = 6e-18
Identities = 46/111 (41%), Positives = 63/111 (56%)
Frame = +2
Query: 50 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 229
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 230 EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPF 382
+ +FF ALSI TKI KG IEI +V + G K+G SE +LL PF
Sbjct: 151 SQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPF 201
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 358 QHVNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVA 537
+ +NI PFSYG+ YD+G I +L I P + + F +AA+SL+ GY T
Sbjct: 194 EKMNIQPFSYGMKCFSDYDNGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGYVTAP 253
Query: 538 S 540
S
Sbjct: 254 S 254
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 90.6 bits (215), Expect = 2e-17
Identities = 45/124 (36%), Positives = 71/124 (57%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
+++K ++D L+ + ++L I GNV F+FT D +++ L N + A+ G +A
Sbjct: 59 LIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQS 118
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*T 370
V + T + P+ FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL
Sbjct: 119 DVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLN 178
Query: 371 SLPF 382
LPF
Sbjct: 179 ILPF 182
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 77.8 bits (183), Expect = 1e-13
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
+MR A+++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG IAP
Sbjct: 72 LMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPE 131
Query: 191 SVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
+V+P T P S Q +P +I G + I D ++K G+++ A +L
Sbjct: 132 DIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEIL 188
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 77.4 bits (182), Expect = 2e-13
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = -1
Query: 288 IVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 109
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 108 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIM 10
VKTKPT PL G++FS++G + LMA L M
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTM 93
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 73.3 bits (172), Expect = 3e-12
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 5 EAMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 184
E ++KA K+ P LEKL+ +I G + T + + L +N+ APA+PGA+
Sbjct: 61 ELAIKKAAKEL--GKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVV 118
Query: 185 PLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 361
P VV+PA T L P QAL IP +I KG + I D +LK G+ + A +LN
Sbjct: 119 PKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILN 178
Score = 35.5 bits (78), Expect = 0.79
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPT 531
+ I P GL V VY+ G ++ P +L I ++ + + L+++I YPT
Sbjct: 180 LGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPT 235
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 71.3 bits (167), Expect = 1e-11
Identities = 41/120 (34%), Positives = 61/120 (50%)
Frame = -3
Query: 361 VEKSSFRSSHLITRLQDMDIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWS 182
V++ SFRS+ +T + D+++ DNFN T NL + +SLEERSL V N D W
Sbjct: 151 VQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWG 210
Query: 181 NGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGLV 2
N + + + V I + GED+ N++LD R+Q F W D HG++
Sbjct: 211 NSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDHGVL 270
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +2
Query: 47 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 226
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 227 PEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
P S F L IPT+I G I + D + KPGD V A LL +
Sbjct: 143 PGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRL 189
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 50 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 223
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 224 GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLPFRMVL 394
GP T F +A IPTKI +GTI I+ D +K G+ +G A LL P V+
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVI 174
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +2
Query: 44 TNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 223
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NTG+
Sbjct: 76 TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGI 135
Query: 224 GP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 361
P S F L IPT++ +G+I I D + KPGD + A LL+
Sbjct: 136 PPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLS 182
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 64.5 bits (150), Expect = 1e-09
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +2
Query: 50 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 223
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG+
Sbjct: 73 PGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAP 132
Query: 224 GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
GP T F +A IPTKI +GTI I D + G+ + A +L
Sbjct: 133 GPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAIL 176
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 63.7 bits (148), Expect = 3e-09
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +2
Query: 74 HIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 253
++ N+G +FT +L + + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 254 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
L IPT+ISK +IEII D+ ++ + S+ LL
Sbjct: 136 LGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLL 170
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 62.9 bits (146), Expect = 5e-09
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +2
Query: 83 GNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 259
G+ F+FT + + K+ + + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 260 IPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
I T + GTI I D + KPGD + A+LL
Sbjct: 153 IKTMVKGGTIHIAKDTVVAKPGDVISPELASLL 185
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 62.9 bits (146), Expect = 5e-09
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
+E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA +T P
Sbjct: 71 VEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGP 130
Query: 236 -TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
Q + IP KI KG+I + +D I+ G+++ + A +L
Sbjct: 131 ILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADIL 172
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +2
Query: 77 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 253
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 254 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
L IPT++ +G I I D + K G ++ A +L +
Sbjct: 150 LKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRV 186
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.9 bits (141), Expect = 2e-08
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +2
Query: 8 AMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 181
AM++ +I+ E NP L+P + GNVG +FT+GDL + +++ + KV APA G +
Sbjct: 41 AMVKHSIRLRAEKTGNPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLV 100
Query: 182 APLSVVIPAHNTGL 223
A + V++P NTGL
Sbjct: 101 AHIDVIVPPGNTGL 114
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 47 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 223
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 58.8 bits (136), Expect = 7e-08
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +2
Query: 47 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 223
NP L+P + GNVG + T+GDL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 612 NPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 56.8 bits (131), Expect = 3e-07
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 226
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 227 PEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
P S F L + TK+ G + ++ D + KPGD + A +L
Sbjct: 138 PI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPIL 180
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 56.8 bits (131), Expect = 3e-07
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Frame = +2
Query: 11 MMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 184
++++A+++ E NP KL+ ++ V T + + L E+K AP + GAIA
Sbjct: 64 LIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIA 123
Query: 185 PLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 361
P + + + +TG+ P S +A+ IP I KG I I D + K GD + A +L+
Sbjct: 124 PCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLS 183
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +2
Query: 41 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 220
E L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG
Sbjct: 73 EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTG 132
Query: 221 LGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 361
+ P Q + +I +G+I++++D + + G+ V + +L+
Sbjct: 133 IDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLS 180
Score = 37.1 bits (82), Expect = 0.26
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPT 531
+ I P GL ++ V+ G +F P L+I ++ R + A+ LS++ YPT
Sbjct: 182 LGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPT 237
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 55.6 bits (128), Expect = 7e-07
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 98 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKI 274
+FT + ++ L + K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Query: 275 SKGTIEIINDVHILKPGDKVGASEATLL 358
+I I D + KPGD + A+LL
Sbjct: 152 QGNSIVITRDTVVAKPGDTISEELASLL 179
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 55.2 bits (127), Expect = 9e-07
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 TRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKIS 277
T ++ + +E+KV P + G IAP +VIP T + GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVT 144
Query: 278 KGTIEIINDVHILKPGDKVGASEATLL 358
G IEI+ D ++K G+ V A +L
Sbjct: 145 SGKIEIVEDAVVVKEGEIVSPKVANVL 171
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 46.0 bits (104), Expect = 6e-04
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +2
Query: 32 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 211
D L ++L ++ G + V+T + + L K + A+ G IAP +VIP
Sbjct: 73 DSLPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKG 132
Query: 212 NTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM*TSLP 379
T P FQ + IP I G + I + ++K G+K+ A A L +P
Sbjct: 133 PTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISAKLAEALTRLEIMP 189
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 45.6 bits (103), Expect = 7e-04
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +2
Query: 38 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 217
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 218 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
P Q+ IP I G + I V + K GD + A +L +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVITPKVAEVLKL 180
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 246 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 73
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 72 GSSFSRAGF 46
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +2
Query: 11 MMRKAIKDHL--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 184
M R + +H E ++ L H +G +FT + + L + K + A+PG A
Sbjct: 57 MARNTLIEHALNELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETA 116
Query: 185 PLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
P +VIP T P Q + IP I G ++I ++K G+ + A L
Sbjct: 117 PEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEAL 175
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 41.5 bits (93), Expect = 0.012
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 232
L K +KG G +FT +V + E + AR G +A +VV+P +
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149
Query: 233 KTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
+ L +PTK+ KG I + + K G+ + +A +L
Sbjct: 150 MEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKIL 191
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 40.7 bits (91), Expect = 0.021
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ H++G VG +FT +V + K AR G A +V + P
Sbjct: 96 LHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGPLEQFPHS 155
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
+ L +PT + KG + +++D + K GD + +A +L +
Sbjct: 156 MEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDILTPEQARVLKL 199
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 40.7 bits (91), Expect = 0.021
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 232
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 233 KTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
Q L IP+ I G + + ++ G+ V A +L
Sbjct: 132 VVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPELADML 173
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 39.5 bits (88), Expect = 0.048
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 77 IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSF---- 244
+KG G +FT VR L AR G +A ++VIP L +K SF
Sbjct: 107 LKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEP 164
Query: 245 -FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 358
+ L +PT + I ++ D + K GD + +++A LL
Sbjct: 165 ELRKLGLPTSLQNTVIHVLCDHVLCKEGDVLTSAQARLL 203
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 39.1 bits (87), Expect = 0.064
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +2
Query: 53 ALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPE 232
++ ++ ++ +FT + L + K +P + GAIAP +++ T P
Sbjct: 76 SIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPG 135
Query: 233 K-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLN 361
Q+ IP I G + + + K G+ V AT+L+
Sbjct: 136 PILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLS 179
Score = 37.5 bits (83), Expect = 0.20
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 364 VNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVAS 540
+ I P GL ++ YD GTI+ P +L + + N LS++ YPT A+
Sbjct: 181 LEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGAT 239
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 38.7 bits (86), Expect = 0.085
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 29 KDHLET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 205
K H ++ P L L ++KG +FT+ ++R++L + RPGA A +V I
Sbjct: 73 KTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIA 132
Query: 206 AHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
+ P + L +P K+ +G + + D + D + + +L +
Sbjct: 133 SGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSPEQCRILKL 186
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 38.3 bits (85), Expect = 0.11
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = +2
Query: 41 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI---PAH 211
E + L +KG+ G +FT DV V+ AR GA+A +V + P H
Sbjct: 85 EASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTGALARETVTVEAGPVH 144
Query: 212 N-TGLGPEKT--SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 364
+G E T + +PTK+++G IE+ + + K G + A LL +
Sbjct: 145 GPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHTLCKEGQHISPQGAILLRL 198
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 35.9 bits (79), Expect = 0.60
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 208
L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 89 LDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_A7TKI3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 417
Score = 34.3 bits (75), Expect = 1.8
Identities = 25/106 (23%), Positives = 47/106 (44%)
Frame = -3
Query: 391 DHTKRERCSHVEKSSFRSSHLITRLQDMDIIDNFNSTL*NLSGDGKSLEERSLLRTKASV 212
D +R +H E SS +++ ++ ++D + + L DGK+L+ S
Sbjct: 169 DKAQRNNLTHTENSSQKTTEVLDNIRDQSRLHSKKCMLLIRLTDGKTLKNEF-----ESS 223
Query: 211 MSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDV 74
+ ND R+W + SRT ++ + I + E K SL++
Sbjct: 224 QNLNDVRKWVDASRTDGDAPYLFHRTIPRMTFTDGDEIKTLDSLEL 269
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 266 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 138
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 33.9 bits (74), Expect = 2.4
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -3
Query: 307 DIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFIT 128
DI++NFN N D ++L +R L ++ + R++S+ + G+D +++
Sbjct: 268 DIVENFNKIYHNFENDKETLLKRLKLEENDKLLEYDKKRKYSDKANEEAGIDSIIEDSEP 327
Query: 127 HINKISTGEDKANISLDV 74
+ K ++L V
Sbjct: 328 DVKKSRNSISSLPVNLGV 345
>UniRef50_A2R3R9 Cluster: Contig An14c0180, complete genome; n=1;
Aspergillus niger|Rep: Contig An14c0180, complete genome
- Aspergillus niger
Length = 729
Score = 33.9 bits (74), Expect = 2.4
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -1
Query: 498 HVGHSSKELLAKVLRLDVENCRREDGTGVVHL--FDNKTIRKGRDVHMLRRVASEAPTLS 325
H+GH+ + +LR + + + D V+++ D+K I +GR H+ + +E PT++
Sbjct: 60 HLGHARNYVSTDILRRILRDYFKFDVEFVMNITDVDDKIILRGRQQHLFNKYIAEHPTVT 119
Query: 324 P 322
P
Sbjct: 120 P 120
>UniRef50_Q4TAX5 Cluster: Chromosome undetermined SCAF7240, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7240,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 578
Score = 33.5 bits (73), Expect = 3.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 396 CQTGVRLRYHLRAGNSRHQAGGPSREVPCWSGQRGRALVVHRVPDGRV 539
C GV+ R+ R NSR Q G P + W G R ++ PDG++
Sbjct: 322 CSAGVQDRWFWRLRNSRVQEGYPMQIHHFWKGLPARIDAAYQRPDGKL 369
>UniRef50_A5AQV5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 892
Score = 33.5 bits (73), Expect = 3.2
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 4 RGHDEESHQGPS*NKSSSR---KTASSHQGKCWLC 99
RG+D S+QG S +++S+R K+ SS Q +CW C
Sbjct: 253 RGNDRNSNQGRSKSRNSNRNISKSRSSQQVQCWNC 287
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 33.1 bits (72), Expect = 4.2
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 2 HEAMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 181
H M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 306 HNITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPD 364
Query: 182 APLSVVIPAHN 214
+ + IP H+
Sbjct: 365 MDVELDIPRHD 375
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 5.6
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +3
Query: 84 EMLALS-SPVEILLMCVINCWRTKSKPR 164
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_Q1DAQ7 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 525
Score = 32.7 bits (71), Expect = 5.6
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -1
Query: 198 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM*GSSFSRAGFVSRWSLMAF 19
TT G + PG +W L S RT+T+ R KT+ SR F+SR+ M+
Sbjct: 461 TTSEGIIVPG---SWKLRRPSFCRTATKDQRPKTRSATRFRTVLLHSRLAFISRF--MSS 515
Query: 18 LIMASC 1
L M C
Sbjct: 516 LKMGIC 521
>UniRef50_A7HCR1 Cluster: Cobalamin (Vitamin B12) biosynthesis CbiM
protein; n=2; Anaeromyxobacter|Rep: Cobalamin (Vitamin
B12) biosynthesis CbiM protein - Anaeromyxobacter sp.
Fw109-5
Length = 210
Score = 32.7 bits (71), Expect = 5.6
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 369 VHM-LRRVASEAPTLSPGFRIWTSLIISIVPFEILVGMERAWKKEVFSGPRPVL*AGMTT 193
VH+ LRR++ A W ++ +S + +++G++ F P PV A M
Sbjct: 124 VHLALRRLSRRAAAF---LAAWVAVQVSTLAVALVLGLQHRLSATYFPAPLPVTLAAMMV 180
Query: 192 DNGAMAPGRAGAWTLFSNSLSR 127
+ A+ G +TLF+ ++ R
Sbjct: 181 PSLAVTGPAEGLYTLFALAILR 202
>UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein;
n=4; Rhodobacteraceae|Rep: Secretion protein HlyD family
protein - Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9)
Length = 396
Score = 32.7 bits (71), Expect = 5.6
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +1
Query: 370 ISPFSYGLVVKQVYDSGT-----IFAPAILDI--KPEDLREKFLAGVANVAALSLSIGYP 528
+ FS GLV + G+ I +PA+L I +PEDL +F AG VA +L +G P
Sbjct: 218 VRSFSDGLVTQLALSVGSPAATLILSPAMLIIPDRPEDLPLRFTAGFNQVARSTLYVGMP 277
>UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 545
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +2
Query: 161 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 340
P++PGA+ L ++ + G P +F+ + S+PT +I++ H+L + +
Sbjct: 264 PSQPGALPALPTLLAPNPDGSKPMLVNFYPSGSVPTTPVTFASQILSSNHVLLGRNLAAS 323
Query: 341 SEATLLNM 364
S A ++++
Sbjct: 324 SGARVISI 331
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 7.3
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -3
Query: 232 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 53
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 52 WICFKMVLDGFPHHG 8
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
>UniRef50_UPI0000EFD0F5 Cluster: hypothetical protein An18g01440;
n=1; Aspergillus niger|Rep: hypothetical protein
An18g01440 - Aspergillus niger
Length = 693
Score = 31.9 bits (69), Expect = 9.7
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 297 IISIVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTST 118
+ S++P + WKKE+FS P + G T + + P +W+ + SLS T+T
Sbjct: 338 VFSLIPQHGKYAYKATWKKEIFSSPFEKV--GETVSSTFLDPVVPSSWS-GNRSLSNTTT 394
Query: 117 RSP 109
P
Sbjct: 395 FDP 397
>UniRef50_Q8R7C9 Cluster: NADH dehydrogenase, FAD-containing
subunit; n=5; Thermoanaerobacter|Rep: NADH
dehydrogenase, FAD-containing subunit -
Thermoanaerobacter tengcongensis
Length = 596
Score = 31.9 bits (69), Expect = 9.7
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = +2
Query: 5 EAMMRKAIKDHLETNP-ALEKLLPHIKGNVGF--VFTRGDLVDVRDKLLE--NKVQAPAR 169
E M RKA +E +P +K+L + GF + T G+L++ L + N ++ +
Sbjct: 142 EEMFRKA---SVEKDPDEKKKMLTFVIAGAGFTGIETAGELMEWTKSLCDKYNLDRSEIK 198
Query: 170 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 334
+ L+ ++P N L + F + + +E+ D +LK G K+
Sbjct: 199 IMVVEALNTILPNLNAKLAIKAQRFLNKKGVEVLTNSPIVEVARDYVVLKDGRKI 253
>UniRef50_Q30U01 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 325
Score = 31.9 bits (69), Expect = 9.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -2
Query: 530 VGYPMDNESAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTTR 390
+ Y ++NE + L +F+ G +S I GAK++P+ ++T+
Sbjct: 158 IDYKLNNEILSRLENDISSFTSMQEGKLSLILGAKLIPKIAQAISTK 204
>UniRef50_A0KIW0 Cluster: Putative uncharacterized protein; n=2;
Aeromonas|Rep: Putative uncharacterized protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 80
Score = 31.9 bits (69), Expect = 9.7
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 366 EHLSLFVWSCCQTGVRLRYHLRAGNS------RHQAGGPSREVPCWSGQRGRALVVHRVP 527
E+L L W C + +RL+ LR N+ R G +++P + ++G A + P
Sbjct: 2 EYLDLTPWRCPEPLIRLKLWLRQANAGQSLSIRLADAGSRQDIPAYLQRQGHAFTLQEAP 61
Query: 528 D 530
D
Sbjct: 62 D 62
>UniRef50_A5ARJ7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 792
Score = 31.9 bits (69), Expect = 9.7
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -3
Query: 232 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 53
L+ KA + N R S + T+ +F+ + F+TH + +N S ++F+E
Sbjct: 234 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFLTHRTN-GLKKANSNFSAKENEKFYEC 291
Query: 52 WICFKMVLDGFPHHG 8
W + ++ PHHG
Sbjct: 292 WERYMEAINACPHHG 306
>UniRef50_Q9XJT6 Cluster: Terminase; n=2; root|Rep: Terminase -
Bacteriophage D3
Length = 563
Score = 31.9 bits (69), Expect = 9.7
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -3
Query: 346 FRSSHLITRLQDMDI-IDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGS 173
+++++LITRL + I + +FN T+ N+S K +E R + RT GN W G+
Sbjct: 448 WQANYLITRLSNTSIPVVDFNQTVKNMSDPMKEVEARVIARTLWH--DGNPVMTWMMGN 504
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,594,382
Number of Sequences: 1657284
Number of extensions: 12513859
Number of successful extensions: 40523
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 39171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40504
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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