Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O19
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 274 2e-74
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 273 5e-74
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 261 2e-70
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 261 2e-70
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 261 2e-70
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 261 2e-70
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 261 2e-70
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 261 2e-70
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 261 2e-70
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 261 2e-70
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 261 2e-70
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 261 2e-70
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 255 1e-68
Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical pr... 221 3e-58
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 195 2e-50
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical pr... 110 8e-25
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 29 2.3
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 29 2.3
U80842-8|AAB37951.1| 244|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF077541-10|AAM54170.2| 179|Caenorhabditis elegans Cysteinyl tr... 28 5.4
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73424-1|CAA97779.1| 386|Caenorhabditis elegans Hypothetical pr... 27 9.5
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 274 bits (673), Expect = 2e-74
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 273 bits (670), Expect = 5e-74
Identities = 134/136 (98%), Positives = 135/136 (99%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKD+QLARRIRGERA
Sbjct: 121 MPKDMQLARRIRGERA 136
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 261 bits (640), Expect = 2e-70
Identities = 127/136 (93%), Positives = 132/136 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKA RKSAP +GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 255 bits (625), Expect = 1e-68
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRK LATKA RKSA TG VKK HR+RPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LL+RKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 MPKDIQLARRIRGERA 523
MPKD+QLARRIRGER+
Sbjct: 121 MPKDMQLARRIRGERS 136
>Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical
protein E03A3.3 protein.
Length = 127
Score = 221 bits (540), Expect = 3e-58
Identities = 108/123 (87%), Positives = 114/123 (92%)
Frame = +2
Query: 152 GGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 331
GGKAPRKQLATKA RK+A G VKKPHR+RPGTVALREIRRYQKST+LL+RKLPFQRLV
Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLV 63
Query: 332 REIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 511
REIAQD K DLRFQSAAI ALQEASE +LVGLFEDTNLCAIHAKRVTIMPKD+QLARRIR
Sbjct: 64 REIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIR 123
Query: 512 GER 520
GER
Sbjct: 124 GER 126
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 195 bits (476), Expect = 2e-50
Identities = 97/127 (76%), Positives = 109/127 (85%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAVRKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTK TARKS GGKAPRK LATKA RK P G VKK RYRP + AL+EIR+YQKSTE
Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTE 58
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 475
LL+RKLPFQRLVRE+AQ+ ++RFQSAAI AL EA+EAYL+GLFEDTNLCAIHAKRVTI
Sbjct: 59 LLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTI 118
Query: 476 MPKDIQL 496
MPKD+Q+
Sbjct: 119 MPKDMQV 125
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 112 bits (269), Expect = 2e-25
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Frame = +2
Query: 221 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGA 391
V K RYRPG AL EIR+YQK+ +LLI+K PF RLVREI Q F D R +S AI A
Sbjct: 185 VTKTRRYRPGQKALEEIRKYQKTEDLLIQKAPFARLVREIMQTSTPFGADCRIRSDAISA 244
Query: 392 LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 508
LQEA+EA+LV +FE ++L + HAKRVT+M DIQL RR+
Sbjct: 245 LQEAAEAFLVEMFEGSSLISTHAKRVTLMTTDIQLYRRL 283
>U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical
protein F20D6.9 protein.
Length = 118
Score = 110 bits (264), Expect = 8e-25
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = +2
Query: 227 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAS 406
+ + + GTVALREIR+ Q+STELLI + F+RLV+E+AQDF TDL F+ AI ALQ A
Sbjct: 20 RSYPFHSGTVALREIRKQQQSTELLIPRSRFERLVKELAQDFVTDLIFRKDAIDALQAAV 79
Query: 407 EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 517
E YLV LF NLCAI KRVTI +++ ARRIRGE
Sbjct: 80 EDYLVELFRLGNLCAIKCKRVTIEADNLKFARRIRGE 116
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 106 bits (255), Expect = 1e-23
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Frame = +2
Query: 221 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGA 391
+ K RYRPG AL EIR+YQ+S +LLI K PF RLVREI Q F +DLR +S AI A
Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINA 217
Query: 392 LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 508
LQEASEA LV +F+ ++L + H+KR T+ D+QL RR+
Sbjct: 218 LQEASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRL 256
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 217 WS*ETPSLSPWYCSASRNSSLSKIYGVVDPQAAFPAT 327
WS +TP SP ++++SLS YGV P +FP++
Sbjct: 224 WSYDTPQTSP---RRAQSASLSPPYGVPSPSYSFPSS 257
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 248 GTVALREIRRYQKS--TELLIRKLPFQRLVREIAQDFKT 358
G + +E+++ ++ T+LL+R LPF+ V+E+ F+T
Sbjct: 732 GALKRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFET 770
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +2
Query: 119 ARTKQTARKSTGGK--APRKQLATKAVRKSAP 208
+R++ +R ST GK AP+K + TKA R +P
Sbjct: 94 SRSRSRSRSSTRGKKRAPKKAVTTKAARSISP 125
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 287 IFDSDEFLEALQYQGDNDGVS*LHQ*WVPI 198
+F D FL+ L QGD+D + L+ W P+
Sbjct: 1 MFFLDAFLKGLHKQGDDDSIDRLNYYWTPM 30
>U80842-8|AAB37951.1| 244|Caenorhabditis elegans Hypothetical
protein ZC239.12 protein.
Length = 244
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 25 LCSLLWNLFINPILVQFYIV 84
+CSL ++ F P+LV FY+V
Sbjct: 134 VCSLYFDFFFQPVLVIFYLV 153
>AF077541-10|AAM54170.2| 179|Caenorhabditis elegans Cysteinyl trna
synthetase protein2, isoform a protein.
Length = 179
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 349 VLSNFSNESLERQLADQQLRR--FLIATNFSKRYSTRAITMGFLNSTSSGC 203
+L ++ NESL +L + F++ + SKR+S++ I+ + +GC
Sbjct: 114 LLKSYFNESLHLNSTHSKLLQTTFIVYLHKSKRFSSKTISTYMFHQIKTGC 164
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 27.5 bits (58), Expect = 7.2
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Frame = -1
Query: 538 KYINLSTLSADSPGELDVFRHNGYAFGVDGAKVGVFKQTHQIGFTG----LLQSANGSRL 371
+Y N +L A + + V +NG VDG KVGV + + TG L S + SR+
Sbjct: 197 RYNNDGSLFASTGSDGTVVLYNG----VDGEKVGVLEDAKGVAHTGSIFALAWSPDQSRI 252
Query: 370 ETKIGFKVLS--NFSNESLERQLA-DQQLRRFLIATNFSKRYSTRAITMGFLN 221
T K + + S LER + ++ + ++K GFLN
Sbjct: 253 ATASADKSVKIWDVSARKLERTIVMGSKIEDQQLGIVWTKSALITVSVSGFLN 305
>Z73424-1|CAA97779.1| 386|Caenorhabditis elegans Hypothetical
protein C44B9.2 protein.
Length = 386
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = -1
Query: 235 MGFLNSTSSGCRFSHRFSSQLFARSFTSCRF 143
M ++NS + C F H+++ + + C+F
Sbjct: 177 MAYINSNGAVCSFLHKYAKIVHQKEHVHCKF 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,624,022
Number of Sequences: 27780
Number of extensions: 255014
Number of successful extensions: 689
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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