Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O18
(545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104233-1|AAI04234.1| 118|Homo sapiens late cornified envelope... 38 0.023
BC104232-1|AAI04233.1| 118|Homo sapiens late cornified envelope... 38 0.023
AL353779-8|CAI20982.1| 118|Homo sapiens late cornified envelope... 38 0.023
AL353779-6|CAI20980.1| 118|Homo sapiens late cornified envelope... 38 0.023
AL162596-1|CAI19550.1| 118|Homo sapiens late cornified envelope... 38 0.023
AL353779-5|CAI20979.1| 118|Homo sapiens late cornified envelope... 38 0.030
AL162596-2|CAI19551.1| 110|Homo sapiens late cornified envelope... 38 0.030
AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope... 37 0.053
AL353779-7|CAI20981.1| 114|Homo sapiens late cornified envelope... 36 0.093
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 35 0.21
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 35 0.21
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 35 0.21
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 35 0.21
AL139247-5|CAI21683.1| 110|Homo sapiens late cornified envelope... 35 0.21
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 35 0.21
BC130605-1|AAI30606.1| 110|Homo sapiens late cornified envelope... 33 0.86
BC130603-1|AAI30604.1| 110|Homo sapiens late cornified envelope... 33 0.86
AL139247-4|CAI21682.1| 110|Homo sapiens late cornified envelope... 33 0.86
AL139247-6|CAI21684.1| 110|Homo sapiens late cornified envelope... 32 1.1
AF005080-1|AAB83960.1| 110|Homo sapiens skin-specific protein p... 32 1.1
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 31 2.0
U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein. 31 2.0
AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter r... 31 2.0
AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter r... 31 2.0
U24389-1|AAA68940.1| 574|Homo sapiens lysyl oxidase-like protei... 31 3.5
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 31 3.5
L21186-1|AAA50162.1| 574|Homo sapiens lysyl oxidase-like protei... 31 3.5
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 31 3.5
BC068542-1|AAH68542.1| 574|Homo sapiens lysyl oxidase-like 1 pr... 31 3.5
BC015090-1|AAH15090.1| 574|Homo sapiens lysyl oxidase-like 1 pr... 31 3.5
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 31 3.5
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 31 3.5
AB209423-1|BAD92660.1| 1103|Homo sapiens myosin XV variant protein. 31 3.5
X52426-1|CAA36673.1| 420|Homo sapiens cytokeratin 13 protein. 30 4.6
BC126184-1|AAI26185.1| 458|Homo sapiens keratin 13 protein. 30 4.6
BC077718-1|AAH77718.2| 458|Homo sapiens keratin 13 protein. 30 4.6
BC002661-1|AAH02661.3| 458|Homo sapiens keratin 13 protein. 30 4.6
AK223077-1|BAD96797.1| 458|Homo sapiens keratin 13 isoform a va... 30 4.6
AK223051-1|BAD96771.1| 458|Homo sapiens keratin 13 isoform a va... 30 4.6
AF049259-1|AAC35754.1| 420|Homo sapiens keratin 13 protein. 30 4.6
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 30 6.1
X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for ... 30 6.1
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 30 6.1
L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen ... 30 6.1
L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein. 30 6.1
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 30 6.1
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 30 6.1
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 30 6.1
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 30 6.1
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 30 6.1
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 30 6.1
AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha ... 30 6.1
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 30 6.1
AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha ... 30 6.1
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 30 6.1
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 30 6.1
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 30 6.1
BC146818-1|AAI46819.1| 777|Homo sapiens similar to CTAGE6 protein. 29 8.0
BC142635-1|AAI42636.1| 753|Homo sapiens SYNPO2L protein protein. 29 8.0
BC113447-1|AAI13448.1| 861|Homo sapiens hypothetical protein FL... 29 8.0
BC113445-1|AAI13446.1| 861|Homo sapiens hypothetical protein FL... 29 8.0
BC101324-1|AAI01325.1| 546|Homo sapiens CTAGE6 protein protein. 29 8.0
BC101323-1|AAI01324.1| 546|Homo sapiens CTAGE6 protein protein. 29 8.0
BC101322-1|AAI01323.1| 546|Homo sapiens CTAGE4 protein protein. 29 8.0
BC043153-1|AAH43153.1| 732|Homo sapiens CTAGE6 protein protein. 29 8.0
AL135904-2|CAB99213.1| 777|Homo sapiens dJ1005H11.2 (WUGSC:H_DJ... 29 8.0
AL049177-1|CAI42947.1| 643|Homo sapiens melanoma antigen family... 29 8.0
AL023279-1|CAI42601.1| 643|Homo sapiens melanoma antigen family... 29 8.0
AL022152-3|CAI42088.1| 643|Homo sapiens melanoma antigen family... 29 8.0
AK095696-1|BAC04612.1| 861|Homo sapiens protein ( Homo sapiens ... 29 8.0
AK022983-1|BAB14346.1| 753|Homo sapiens protein ( Homo sapiens ... 29 8.0
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 29 8.0
AF490508-1|AAM08355.1| 643|Homo sapiens hepatocellular carcinom... 29 8.0
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 29 8.0
AC010984-1|AAY24355.1| 861|Homo sapiens unknown protein. 29 8.0
AC005587-2|AAD05194.1| 777|Homo sapiens unknown protein. 29 8.0
AB188489-1|BAD37139.1| 977|Homo sapiens synaptopodin 2-like pro... 29 8.0
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 29 8.0
>BC104233-1|AAI04234.1| 118|Homo sapiens late cornified envelope 1B
protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.023
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKGMFWTFNNG 323
P K PK PPK L+ + PK PPK P+ V+ G C G SS G + + G
Sbjct: 12 PPPKCIPKCPPKC---LTPRCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSCGSSSGG 66
>BC104232-1|AAI04233.1| 118|Homo sapiens late cornified envelope 1B
protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.023
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKGMFWTFNNG 323
P K PK PPK L+ + PK PPK P+ V+ G C G SS G + + G
Sbjct: 12 PPPKCIPKCPPKC---LTPRCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSCGSSSGG 66
>AL353779-8|CAI20982.1| 118|Homo sapiens late cornified envelope 1C
protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.023
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKGMFWTFNNG 323
P K PK PPK + K PK PPK P+ V+ G C G SS G + + G
Sbjct: 12 PPPKCTPKCPPKCP---TPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSCGSSSGG 66
>AL353779-6|CAI20980.1| 118|Homo sapiens late cornified envelope 1E
protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.023
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKGMFWTFNNG 323
P K PK PPK + K PK PPK P+ V+ G C G SS G + + G
Sbjct: 12 PPPKCTPKCPPKCP---TPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSCGSSSGG 66
>AL162596-1|CAI19550.1| 118|Homo sapiens late cornified envelope 1B
protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.023
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKGMFWTFNNG 323
P K PK PPK L+ + PK PPK P+ V+ G C G SS G + + G
Sbjct: 12 PPPKCIPKCPPKC---LTPRCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSCGSSSGG 66
>AL353779-5|CAI20979.1| 118|Homo sapiens late cornified envelope 1F
protein.
Length = 118
Score = 37.5 bits (83), Expect = 0.030
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKG 347
P K PK PPK + K PK PPK P+ V+ G C G SS G
Sbjct: 12 PPPKCTPKCPPKCP---TPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGG 58
>AL162596-2|CAI19551.1| 110|Homo sapiens late cornified envelope 1A
protein.
Length = 110
Score = 37.5 bits (83), Expect = 0.030
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSSKG 347
P K PK PPK + K PK PPK P+ V+ G C G SS G
Sbjct: 12 PPPKCTPKCPPKCP---TPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGG 58
>AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope 5A
protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.053
Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTV-VTVGSCIGGSSKG 347
P K PK PPK TP K PK PPK P + V SC G SS G
Sbjct: 12 PPPKCTPKCPPKCTP----KCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGG 58
>AL353779-7|CAI20981.1| 114|Homo sapiens late cornified envelope 1D
protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.093
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 469 PPKSTPWLSAKF-TPKSPPKFVPMFVSTVVTVGSCIGGSSKG 347
PPK TP + K PK PPK P+ V+ G C G SS G
Sbjct: 13 PPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGG 54
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 48 RPPXPLNKPKTIYGPPKVYGPPKSYGPP 131
RPP PL P T+ PP + GPP PP
Sbjct: 326 RPPGPLGPPLTLAPPPHLPGPPPGAPPP 353
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKV--YGPPKSYGPPKLGPP 146
+FP Q + +PP P PP V YGPP PP+ GPP
Sbjct: 278 LFPGQPFGQPPLGPLPPGP---PPPVPGYGPPPGPPPPQQGPP 317
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 48 RPPXPLNKPKTIYGPPKVYGPPKSYGPP 131
RPP PL P T+ PP + GPP PP
Sbjct: 326 RPPGPLGPPLTLAPPPHLPGPPPGAPPP 353
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKV--YGPPKSYGPPKLGPP 146
+FP Q + +PP P PP V YGPP PP+ GPP
Sbjct: 278 LFPGQPFGQPPLGPLPPGP---PPPVPGYGPPPGPPPPQQGPP 317
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 48 RPPXPLNKPKTIYGPPKVYGPPKSYGPP 131
RPP PL P T+ PP + GPP PP
Sbjct: 253 RPPGPLGPPLTLAPPPHLPGPPPGAPPP 280
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKV--YGPPKSYGPPKLGPP 146
+FP Q + +PP P PP V YGPP PP+ GPP
Sbjct: 205 LFPGQPFGQPPLGPLPPGP---PPPVPGYGPPPGPPPPQQGPP 244
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 48 RPPXPLNKPKTIYGPPKVYGPPKSYGPP 131
RPP PL P T+ PP + GPP PP
Sbjct: 363 RPPGPLGPPLTLAPPPHLPGPPPGAPPP 390
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKV--YGPPKSYGPPKLGPP 146
+FP Q + +PP P PP V YGPP PP+ GPP
Sbjct: 315 LFPGQPFGQPPLGPLPPGP---PPPVPGYGPPPGPPPPQQGPP 354
>AL139247-5|CAI21683.1| 110|Homo sapiens late cornified envelope 2C
protein.
Length = 110
Score = 34.7 bits (76), Expect = 0.21
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSPPKF-VPMF--VSTVV--TVGSCIGGSSKG 347
PK PPK TP K PK PP+ P F VS+ + GSC G SS G
Sbjct: 14 PKCPPKCTPKCPPKCPPKCPPQCPAPCFPAVSSCCGPSSGSCCGPSSGG 62
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 34.7 bits (76), Expect = 0.21
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 48 RPPXPLNKPKTIYGPPKVYGPPKSYGPP 131
RPP PL P T+ PP + GPP PP
Sbjct: 326 RPPGPLGPPLTLAPPPHLPGPPPGAPPP 353
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKV--YGPPKSYGPPKLGPP 146
+FP Q + +PP P PP V YGPP PP+ GPP
Sbjct: 278 LFPGQPFGQPPLGPLPPGP---PPPVPGYGPPPGPPPPQQGPP 317
>BC130605-1|AAI30606.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.86
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSS 353
PK PPK TP K PK PP+ P S V+ SC G SS
Sbjct: 14 PKCPPKCTPKCPPKCPPKCPPQ-CPAPCSPAVS--SCCGPSS 52
>BC130603-1|AAI30604.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.86
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSS 353
PK PPK TP K PK PP+ P S V+ SC G SS
Sbjct: 14 PKCPPKCTPKCPPKCPPKCPPQ-CPAPCSPAVS--SCCGPSS 52
>AL139247-4|CAI21682.1| 110|Homo sapiens late cornified envelope 2D
protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.86
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSS 353
PK PPK TP K PK PP+ P S V+ SC G SS
Sbjct: 14 PKCPPKCTPKCPPKCPPKCPPQ-CPAPCSPAVS--SCCGPSS 52
>AL139247-6|CAI21684.1| 110|Homo sapiens late cornified envelope 2B
protein.
Length = 110
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSPPKFVPMFVSTV-VTVGSCIGGSSKG 347
PK PPK TP K PK PPK +P + V SC G S G
Sbjct: 14 PKCPPKCTP----KCPPKCPPKCLPQCPAPCSPAVSSCCGPISGG 54
>AF005080-1|AAB83960.1| 110|Homo sapiens skin-specific protein
protein.
Length = 110
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSPPKFVPMFVSTV-VTVGSCIGGSSKG 347
PK PPK TP K PK PPK +P + V SC G S G
Sbjct: 14 PKCPPKCTP----KCPPKCPPKCLPQCPAPCSPAVSSCCGPISGG 54
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 36 QNYERPPXPLNKPKTIYGPPKVYGPP 113
Q+ RPP PL TI+ PP+ GPP
Sbjct: 2058 QSPRRPPHPLPPRLTIHAPPQELGPP 2083
>U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein.
Length = 2363
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 36 QNYERPPXPLNKPKTIYGPPKVYGPP 113
Q+ RPP PL TI+ PP+ GPP
Sbjct: 2072 QSPRRPPHPLPPRLTIHAPPQELGPP 2097
>AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 36 QNYERPPXPLNKPKTIYGPPKVYGPP 113
Q+ RPP PL TI+ PP+ GPP
Sbjct: 2072 QSPRRPPHPLPPRLTIHAPPQELGPP 2097
>AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 36 QNYERPPXPLNKPKTIYGPPKVYGPP 113
Q+ RPP PL TI+ PP+ GPP
Sbjct: 2072 QSPRRPPHPLPPRLTIHAPPQELGPP 2097
>U24389-1|AAA68940.1| 574|Homo sapiens lysyl oxidase-like protein
protein.
Length = 574
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 21 RVFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPK-LGPPKL 152
+ +P+ E P+ + PP PP++YGPP+ L PP L
Sbjct: 288 QAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYL 332
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 499 APESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSC 368
A S P KS P + ++ + PP F P+ S+ VT SC
Sbjct: 3603 AAPSSASPHASRKSWPQVVSRASAAKPPSFPPLSSSSTVTSSSC 3646
>L21186-1|AAA50162.1| 574|Homo sapiens lysyl oxidase-like protein
protein.
Length = 574
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 21 RVFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPK-LGPPKL 152
+ +P+ E P+ + PP PP++YGPP+ L PP L
Sbjct: 288 QAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYL 332
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 499 APESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSC 368
A S P KS P + ++ + PP F P+ S+ VT SC
Sbjct: 2683 AAPSSASPHASRKSWPQVVSRASAAKPPSFPPLSSSSTVTSSSC 2726
>BC068542-1|AAH68542.1| 574|Homo sapiens lysyl oxidase-like 1
protein.
Length = 574
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 21 RVFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPK-LGPPKL 152
+ +P+ E P+ + PP PP++YGPP+ L PP L
Sbjct: 288 QAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYL 332
>BC015090-1|AAH15090.1| 574|Homo sapiens lysyl oxidase-like 1
protein.
Length = 574
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 21 RVFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPK-LGPPKL 152
+ +P+ E P+ + PP PP++YGPP+ L PP L
Sbjct: 288 QAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYL 332
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 21 RVFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
R + + RPP P P+T+ + PP PP GPP
Sbjct: 634 RARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPSSGPP 675
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 499 APESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSC 368
A S P KS P + ++ + PP F P+ S+ VT SC
Sbjct: 2453 AAPSSASPHASRKSWPQVVSRASAAKPPSFPPLSSSSTVTSSSC 2496
>AB209423-1|BAD92660.1| 1103|Homo sapiens myosin XV variant protein.
Length = 1103
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 21 RVFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
R + + RPP P P+T+ + PP PP GPP
Sbjct: 511 RARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPSSGPP 552
>X52426-1|CAA36673.1| 420|Homo sapiens cytokeratin 13 protein.
Length = 420
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>BC126184-1|AAI26185.1| 458|Homo sapiens keratin 13 protein.
Length = 458
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>BC077718-1|AAH77718.2| 458|Homo sapiens keratin 13 protein.
Length = 458
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>BC002661-1|AAH02661.3| 458|Homo sapiens keratin 13 protein.
Length = 458
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>AK223077-1|BAD96797.1| 458|Homo sapiens keratin 13 isoform a
variant protein.
Length = 458
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>AK223051-1|BAD96771.1| 458|Homo sapiens keratin 13 isoform a
variant protein.
Length = 458
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>AF049259-1|AAC35754.1| 420|Homo sapiens keratin 13 protein.
Length = 420
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSNFDSG 497
G+ FGG +G +G GG FG F G
Sbjct: 58 GSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 757 GPPGARGPPGGQGPPGLSGPP 777
>X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for
alpha-1 chain of collagen IV N-terminus. ).
Length = 944
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 802 GPPGARGPPGGQGPPGLSGPP 822
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 802 GPPGARGPPGGQGPPGLSGPP 822
>L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen
protein.
Length = 1388
Score = 29.9 bits (64), Expect = 6.1
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +3
Query: 54 PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
P P K K GPP V GPP GPP GPP
Sbjct: 702 PGPPGK-KGQAGPPGVMGPPGPPGPP--GPP 729
>L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein.
Length = 1388
Score = 29.9 bits (64), Expect = 6.1
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +3
Query: 54 PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
P P K K GPP V GPP GPP GPP
Sbjct: 702 PGPPGK-KGQAGPPGVMGPPGPPGPP--GPP 729
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP-KLGPP 146
V P E PP P P I GPP + GP G P GPP
Sbjct: 434 VEPGMLVEGPPGPAG-PAGIMGPPGLQGPTGPPGDPGDRGPP 474
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 802 GPPGARGPPGGQGPPGLSGPP 822
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP-KLGPP 146
V P E PP P P I GPP + GP G P GPP
Sbjct: 318 VEPGMLVEGPPGPAG-PAGIMGPPGLQGPTGPPGDPGDRGPP 358
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 208 GPPGARGPPGGQGPPGLSGPP 228
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP-KLGPP 146
V P E PP P P I GPP + GP G P GPP
Sbjct: 434 VEPGMLVEGPPGPAG-PAGIMGPPGLQGPTGPPGDPGDRGPP 474
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 802 GPPGARGPPGGQGPPGLSGPP 822
>AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha 1
protein.
Length = 1388
Score = 29.9 bits (64), Expect = 6.1
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +3
Query: 54 PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
P P K K GPP V GPP GPP GPP
Sbjct: 702 PGPPGK-KGQAGPPGVMGPPGPPGPP--GPP 729
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 87 GPPKVYGPPKSYGPPKL-GPP 146
GPP GPP GPP L GPP
Sbjct: 802 GPPGARGPPGGQGPPGLSGPP 822
>AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha 1
protein.
Length = 1388
Score = 29.9 bits (64), Expect = 6.1
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +3
Query: 54 PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
P P K K GPP V GPP GPP GPP
Sbjct: 702 PGPPGK-KGQAGPPGVMGPPGPPGPP--GPP 729
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP-KLGPP 146
V P E PP P P I GPP + GP G P GPP
Sbjct: 395 VEPGMLVEGPPGPAG-PAGIMGPPGLQGPTGPPGDPGDRGPP 435
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP-KLGPP 146
V P E PP P P I GPP + GP G P GPP
Sbjct: 446 VEPGMLVEGPPGPAG-PAGIMGPPGLQGPTGPPGDPGDRGPP 486
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 VFPNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP-KLGPP 146
V P E PP P P I GPP + GP G P GPP
Sbjct: 434 VEPGMLVEGPPGPAG-PAGIMGPPGLQGPTGPPGDPGDRGPP 474
>BC146818-1|AAI46819.1| 777|Homo sapiens similar to CTAGE6 protein.
Length = 777
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 719 PPFPPPPPGTMFGASRGYFPPRDFPGPP 746
>BC142635-1|AAI42636.1| 753|Homo sapiens SYNPO2L protein protein.
Length = 753
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -2
Query: 517 IGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSS 353
+GA PK PP P TPK+PP P S + G G +S
Sbjct: 466 VGARSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAAS 520
>BC113447-1|AAI13448.1| 861|Homo sapiens hypothetical protein
FLJ38377 protein.
Length = 861
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 160 DLLKRRMALPSPSRRTVHHLKYQNS*RNHSHRNHTMDL 273
D+L+++ + SPS T+H L Y S ++ R+ DL
Sbjct: 715 DMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDL 752
>BC113445-1|AAI13446.1| 861|Homo sapiens hypothetical protein
FLJ38377 protein.
Length = 861
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 160 DLLKRRMALPSPSRRTVHHLKYQNS*RNHSHRNHTMDL 273
D+L+++ + SPS T+H L Y S ++ R+ DL
Sbjct: 715 DMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDL 752
>BC101324-1|AAI01325.1| 546|Homo sapiens CTAGE6 protein protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 502 PPFPPPPPGTMFGASRGYFPPRDFPGPP 529
>BC101323-1|AAI01324.1| 546|Homo sapiens CTAGE6 protein protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 502 PPFPPPPPGTMFGASRGYFPPRDFPGPP 529
>BC101322-1|AAI01323.1| 546|Homo sapiens CTAGE4 protein protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 502 PPFPPPPPGTMFGASRGYFPPRDFPGPP 529
>BC043153-1|AAH43153.1| 732|Homo sapiens CTAGE6 protein protein.
Length = 732
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 674 PPFPPPPPGTMFGASRGYFPPRDFPGPP 701
>AL135904-2|CAB99213.1| 777|Homo sapiens dJ1005H11.2
(WUGSC:H_DJ0988G15.3 PROTEIN) protein.
Length = 777
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 719 PPFPPPPPGTMFGASRGYFPPRDFPGPP 746
>AL049177-1|CAI42947.1| 643|Homo sapiens melanoma antigen family C,
3 protein.
Length = 643
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 544 GRERSGVPYIGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPK 413
G E +P G L P+S P++PP+ P +S + P+SPP+
Sbjct: 373 GGEDEDMPAAGMPPL-PQSP--PEIPPQGPPKISPQGPPQSPPQ 413
>AL023279-1|CAI42601.1| 643|Homo sapiens melanoma antigen family C,
3 protein.
Length = 643
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 544 GRERSGVPYIGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPK 413
G E +P G L P+S P++PP+ P +S + P+SPP+
Sbjct: 373 GGEDEDMPAAGMPPL-PQSP--PEIPPQGPPKISPQGPPQSPPQ 413
>AL022152-3|CAI42088.1| 643|Homo sapiens melanoma antigen family C,
3 protein.
Length = 643
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 544 GRERSGVPYIGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPK 413
G E +P G L P+S P++PP+ P +S + P+SPP+
Sbjct: 373 GGEDEDMPAAGMPPL-PQSP--PEIPPQGPPKISPQGPPQSPPQ 413
>AK095696-1|BAC04612.1| 861|Homo sapiens protein ( Homo sapiens
cDNA FLJ38377 fis, clone FEBRA2002781. ).
Length = 861
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 160 DLLKRRMALPSPSRRTVHHLKYQNS*RNHSHRNHTMDL 273
D+L+++ + SPS T+H L Y S ++ R+ DL
Sbjct: 715 DMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDL 752
>AK022983-1|BAB14346.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ12921 fis, clone NT2RP2004600. ).
Length = 753
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -2
Query: 517 IGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSS 353
+GA PK PP P TPK+PP P S + G G +S
Sbjct: 466 VGARSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAAS 520
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP PL P T PP PP PP L P
Sbjct: 413 PPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSP 444
>AF490508-1|AAM08355.1| 643|Homo sapiens hepatocellular
carcinoma-associated protein HCA2 protein.
Length = 643
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 544 GRERSGVPYIGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPK 413
G E +P G L P+S P++PP+ P +S + P+SPP+
Sbjct: 373 GGEDEDMPAAGMPPL-PQSP--PEIPPQGPPKISPQGPPQSPPQ 413
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP PL P T PP PP PP L P
Sbjct: 303 PPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSP 334
>AC010984-1|AAY24355.1| 861|Homo sapiens unknown protein.
Length = 861
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 160 DLLKRRMALPSPSRRTVHHLKYQNS*RNHSHRNHTMDL 273
D+L+++ + SPS T+H L Y S ++ R+ DL
Sbjct: 715 DMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDL 752
>AC005587-2|AAD05194.1| 777|Homo sapiens unknown protein.
Length = 777
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSY-GPP 131
PP P P T++G + Y PP+ + GPP
Sbjct: 719 PPFPPPPPGTMFGASRGYFPPRDFPGPP 746
>AB188489-1|BAD37139.1| 977|Homo sapiens synaptopodin 2-like
protein.
Length = 977
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -2
Query: 517 IGAGKLAPESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCIGGSS 353
+GA PK PP P TPK+PP P S + G G +S
Sbjct: 690 VGARSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAAS 744
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP PL P T PP PP PP L P
Sbjct: 113 PPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSP 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,856,368
Number of Sequences: 237096
Number of extensions: 1900007
Number of successful extensions: 9828
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 7308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9550
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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