Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O18
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.41
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 31 0.72
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 1.7
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 1.7
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 1.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 1.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 1.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 1.7
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 29 1.7
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 29 1.7
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 29 1.7
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 29 1.7
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 29 1.7
U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z75533-10|CAJ85755.1| 189|Caenorhabditis elegans Hypothetical p... 29 2.9
Z75533-9|CAA99814.2| 772|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.9
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 28 3.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 3.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 3.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 5.0
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 5.0
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 27 6.7
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 27 6.7
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 27 6.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 6.7
AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical ... 27 6.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40956-4|AAA81759.1| 262|Caenorhabditis elegans Hypothetical pr... 27 8.8
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 27 8.8
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 27 8.8
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 27 8.8
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 27 8.8
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 27 8.8
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP P + +G P+ G P YGPP G P
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGP 417
Score = 31.1 bits (67), Expect = 0.54
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 36 QNYERPPXPLNKPKTIYGPPKVYGPPKSYGPP 131
Q++ PP P++ + PP GPP ++ PP
Sbjct: 362 QSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPP 393
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +3
Query: 84 YGPPKVYGP--PKSYGPPKLGP 143
YGPP GP P SYGPP+ GP
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGP 430
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKV----YGPPKSYGPPKLGPP 146
PP P + YGPP+ +GPP GP GPP
Sbjct: 413 PPGGPGAPGS-YGPPQGGPGGFGPPPPGGPGAYGPP 447
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 30.7 bits (66), Expect = 0.72
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 TRVFPNQNYERPPXPLNKPKTI-YGPPKVYGPPKS-YGPPKLGPPK 149
T+ PN + E+ P +P+ I GPP Y PP + P K+ PK
Sbjct: 27 TQPSPNASTEQMAYPRQQPQGIPQGPPPAYAPPAAPKAPEKVVEPK 72
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 45 ERPPXPLNKPKTIYGPPKVYGPPKSYGPPKLGP-PKL 152
E PP P P + PPKV P + PP L P PK+
Sbjct: 972 EAPPIPKRNPPPLGAPPKV--PEGARAPPPLPPRPKV 1006
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 45 ERPPXPLNKPKTIYGPPKVYGPPKSYGPPKLGP-PKL 152
E PP P P + PPKV P + PP L P PK+
Sbjct: 972 EAPPIPKRNPPPLGAPPKV--PEGARAPPPLPPRPKV 1006
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 45 ERPPXPLNKPKTIYGPPKVYGPPKSYGPPKLGP-PKL 152
E PP P P + PPKV P + PP L P PK+
Sbjct: 972 EAPPIPKRNPPPLGAPPKV--PEGARAPPPLPPRPKV 1006
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 493 ESKFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGS 371
ES+F P+ P S +F P+ PPKFV S V+TV +
Sbjct: 382 ESRFHPQPPKPPRAGTSRRFLPE-PPKFVTTLPS-VITVNA 420
>U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical
protein F12A10.7 protein.
Length = 113
Score = 29.1 bits (62), Expect = 2.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 414 FGGDFGVNFADSHGVDFGGTFGSNFDSGA 500
+GG +G + +G +GG +G N+ S +
Sbjct: 65 YGGGYGGGYGGGYGGGYGGRYGGNYGSSS 93
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 405 GTNFGGDFGVNFADSHGVDFGGTFGSN 485
G +GG +G + +G +GG +GS+
Sbjct: 66 GGGYGGGYGGGYGGGYGGRYGGNYGSS 92
>Z75533-10|CAJ85755.1| 189|Caenorhabditis elegans Hypothetical
protein C54G4.1b protein.
Length = 189
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 13 SARGSSQTKITNDPRHL*TNLKQSTDHQKSMALQNLTXHLNSGHRNSLMDLLKRRMALPS 192
S G + T ++ D ++L T L + D +K +++Q LT H+ S+ L+ LPS
Sbjct: 30 SFTGDAWTNVSADAKNLITGLL-TVDPKKRLSMQELTAHMWLKSSASMDTPLQTPSILPS 88
Query: 193 PSRRT 207
+ T
Sbjct: 89 SADET 93
>Z75533-9|CAA99814.2| 772|Caenorhabditis elegans Hypothetical
protein C54G4.1a protein.
Length = 772
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 13 SARGSSQTKITNDPRHL*TNLKQSTDHQKSMALQNLTXHLNSGHRNSLMDLLKRRMALPS 192
S G + T ++ D ++L T L + D +K +++Q LT H+ S+ L+ LPS
Sbjct: 613 SFTGDAWTNVSADAKNLITGLL-TVDPKKRLSMQELTAHMWLKSSASMDTPLQTPSILPS 671
Query: 193 PSRRT 207
+ T
Sbjct: 672 SADET 676
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP P P GPP + G P P + GPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP P P GPP + G P P + GPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 42 YERPPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
Y+RPP + P GPP G P GPP GPP
Sbjct: 122 YQRPPC-IRCPVGEPGPPGPDGEPGEQGPP--GPP 153
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP P+ P + PP PP+ PP + PP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPP 64
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPP-KVYGPPKSYGPPKLGPPKL 152
PP +N P PP + GPP GPP G P +
Sbjct: 1470 PPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPM 1504
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
PP P PP + GPP G P GPP
Sbjct: 1573 PPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPP 1604
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 30 PNQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPKL--GPP 146
P + P + P GPP GPP GPP GPP
Sbjct: 1470 PPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPP 1510
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Frame = +3
Query: 30 PNQNYERPPXPLNKPKTI-----YGPPKVYGPPKSYGPPKLGP 143
P Q PP P P YGPP PP + PP P
Sbjct: 713 PPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAP 755
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPP---KVYGPPKSYGPPKLGPP 146
PP P + GPP + YGPP Y P + PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +3
Query: 51 PPXPLNKPKTIYGPP---KVYGPPKSYGPPKLGPP 146
PP P + GPP + YGPP Y P + PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 478 PKVPPKSTPWLSAKFTPKSP 419
PK PPKSTP S PK P
Sbjct: 301 PKSPPKSTPRTSKSTPPKRP 320
>Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical
protein C27H6.4b protein.
Length = 331
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 49 DPRHL*TNLKQSTDHQKSMALQNLTXHLNSGHRNSLMDLLKRRMALPSPSRRTVHHL-KY 225
D + L +L Q+T H K+M+ ++L + D LK+R S + L K+
Sbjct: 89 DSKSLSRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAKF 148
Query: 226 QNS*RNHSHRNHTMDLL 276
N N ++ D++
Sbjct: 149 CNEIGNRVEKDKRKDII 165
>Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical
protein C27H6.4a protein.
Length = 272
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 49 DPRHL*TNLKQSTDHQKSMALQNLTXHLNSGHRNSLMDLLKRRMALPSPSRRTVHHL-KY 225
D + L +L Q+T H K+M+ ++L + D LK+R S + L K+
Sbjct: 30 DSKSLSRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAKF 89
Query: 226 QNS*RNHSHRNHTMDLL 276
N N ++ D++
Sbjct: 90 CNEIGNRVEKDKRKDII 106
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +2
Query: 182 PSQAQADVRCTI*STKTLDETIRTETTLWTS*TNLRTSKAN*DNIRRTVIKCPKHTFRAP 361
P Q+ C+ ST T T+ + TTL T+ T R S + T P T P
Sbjct: 274 PQQSMLWTNCSNLSTTTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTP 333
Query: 362 SYTTS 376
+S
Sbjct: 334 MEQSS 338
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 33 NQNYERPPXPLNKPKTIYGPPKVYGPPKSYGPPKL 137
N N P P P + Y PP PP P +L
Sbjct: 1320 NMNQPSRPIPSQPPSSQYSPPVFAAPPPPSQPTRL 1354
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 YERP-PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
Y +P P + P GPP PP PP LG P
Sbjct: 72 YGQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 107
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 YERP-PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
Y +P P + P GPP PP PP LG P
Sbjct: 95 YGQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 130
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 YERP-PXPLNKPKTIYGPPKVYGPPKSYGPPKLGPP 146
Y +P P + P GPP PP PP LG P
Sbjct: 345 YGQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 380
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 54 PXPLNKPKTIYGPPKVYGPPKSYGPPKLGP 143
P P N P+T PP PP PP P
Sbjct: 123 PAPPNPPRTCCPPPTPAAPPPPPPPPPPAP 152
>AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical
protein F20H11.1 protein.
Length = 486
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 323 CAVCCLNWLWRSVDWFRR 270
C C++ +WR V W+RR
Sbjct: 175 CCEVCMHTIWRLVQWWRR 192
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = +3
Query: 30 PNQNYERP---PXPLNKPKTIYG-PPKVYGPPKSYGPPKLGPP 146
P N + P P KPK + PPK PPK P K PP
Sbjct: 1192 PKLNKKAPAEKPTEKPKPKEVSKEPPKPTEPPKPAAPKKWKPP 1234
>U40956-4|AAA81759.1| 262|Caenorhabditis elegans Hypothetical
protein ZK402.1 protein.
Length = 262
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 487 KFDPKVPPKSTPWLSAKFTPKSPPKFVPMFVSTVVTVGSCI 365
K D KVP + + TP+ P ++ P+F ST+ CI
Sbjct: 138 KNDKKVPMRDFTTDEEEKTPRFPSQYFPIFPSTISYHFFCI 178
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 42 YERPPXPLNKPKTIYGPPKVYGPPKSYG 125
Y +PP +P TIYG P P + G
Sbjct: 522 YTQPPRDTERPSTIYGRPIYTKAPTTVG 549
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 27 FPNQNYERPPXP-LNKPKTIYGPPKVYGPPKSYGPPKL--GPP 146
FPN + + P + +P G P + GPP YG + GPP
Sbjct: 197 FPNGSSQMNGGPAMGQPPPQMGAPNMGGPPNGYGGYGMMNGPP 239
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 27 FPNQNYERPPXP-LNKPKTIYGPPKVYGPPKSYGPPKL--GPP 146
FPN + + P + +P G P + GPP YG + GPP
Sbjct: 194 FPNGSSQMNGGPAMGQPPPQMGAPNMGGPPNGYGGYGMMNGPP 236
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 517 IGAGKLAPESKFDPKVPPKS--TPWLSAKFTPKSPPKFVP 404
+ AGK SK V S TP AK PK PPK P
Sbjct: 72 MAAGKKGASSKASASVSKASASTPARGAKAAPKPPPKKSP 111
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 496 PESKFDPKVPPKSTPWLSAKFTPKSPPKFVP 404
P+ K DPK PK P K PK PK P
Sbjct: 177 PKPKPDPKPKPKPKPKPKPKPNPKPEPKPKP 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,664,075
Number of Sequences: 27780
Number of extensions: 294209
Number of successful extensions: 1383
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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