Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O17
         (301 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.40 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   5.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   6.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   6.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   8.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 216 RHDSR*TCPKCAPF 175
           R D R TCPKC PF
Sbjct: 226 REDKRLTCPKC-PF 238


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 90  LGWSHCRLHMQRAHILPVLLK 152
           LGW       +R ++ PVLL+
Sbjct: 714 LGWVEVWERKRRQYLCPVLLR 734


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 103 IVDFICRERTFCQCFLSSDTRKLIERC 183
           + D I    TF    LSSD     ++C
Sbjct: 11  VQDLIEEPATFSDAVLSSDEELFHQKC 37


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 203 DELAQNVHLSINFLVSLLKK 144
           DE+ +N  L+ N+L  +L+K
Sbjct: 30  DEILKNDRLTKNYLDCILEK 49


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 152 LKKHWQNVRSLHMK 111
           L KH+Q+   LH K
Sbjct: 130 LLKHYQSTTDLHKK 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,441
Number of Sequences: 336
Number of extensions: 1322
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)