Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O17
         (301 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   2.5  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   2.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   2.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   5.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   7.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   7.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   7.6  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 224 GHVDMTPDELAQNVHLSINFLVS 156
           G  ++TPD+  ++VH  I   VS
Sbjct: 79  GTRELTPDDFTEDVHEIIEQCVS 101


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 224 GHVDMTPDELAQNVHLSINFLVS 156
           G  ++TPD+  ++VH  I   VS
Sbjct: 79  GTRELTPDDFTEDVHEIIEQCVS 101


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 185 HFGQVHLESCRRDRRPQTGTTPSSFGI 265
           H GQ+HL       + Q G  P  +G+
Sbjct: 908 HQGQIHLTVAVVQYKTQDGFGPIHYGV 934


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 90  LGWSHCRLHMQRAHIL 137
           LGW H   +   +HIL
Sbjct: 295 LGWGHTSFNGMLSHIL 310


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 228 GHRQAQHLLHL 260
           GH+Q+ H LH+
Sbjct: 805 GHQQSHHGLHI 815


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 102 HCRLHMQ 122
           HC LHMQ
Sbjct: 388 HCELHMQ 394


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 102 HCRLHMQ 122
           HC LHMQ
Sbjct: 388 HCELHMQ 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,296
Number of Sequences: 438
Number of extensions: 1547
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)