Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O16
         (418 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029567-1|AAH29567.1|  507|Homo sapiens DNAH7 protein protein.        29   8.2  
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch...    29   8.2  
AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.              29   8.2  
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.     29   8.2  

>BC029567-1|AAH29567.1|  507|Homo sapiens DNAH7 protein protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 309 LTRMCIYHHTGNSNSTRRTGCVIHRKIFSDDSHSKSSANFLTRIIYFISPAKFHKPY 139
           +T  C Y      +  RRT   I  K F+ +    S   F +  IYF+ P+  HK Y
Sbjct: 119 MTGECNYGGRVTDDWDRRTLRSILNKFFNPELVENSDYKFDSSGIYFVPPSGDHKSY 175


>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
            protein.
          Length = 4024

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 309  LTRMCIYHHTGNSNSTRRTGCVIHRKIFSDDSHSKSSANFLTRIIYFISPAKFHKPY 139
            +T  C Y      +  RRT   I  K F+ +    S   F +  IYF+ P+  HK Y
Sbjct: 3636 MTGECNYGGRVTDDWDRRTLRSILNKFFNPELVENSDYKFDSSGIYFVPPSGDHKSY 3692


>AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.
          Length = 2536

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 309  LTRMCIYHHTGNSNSTRRTGCVIHRKIFSDDSHSKSSANFLTRIIYFISPAKFHKPY 139
            +T  C Y      +  RRT   I  K F+ +    S   F +  IYF+ P+  HK Y
Sbjct: 2361 MTGECNYGGRVTDDWDRRTLRSILNKFFNPELVENSDYKFDSSGIYFVPPSGDHKSY 2417


>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
          Length = 4031

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 309  LTRMCIYHHTGNSNSTRRTGCVIHRKIFSDDSHSKSSANFLTRIIYFISPAKFHKPY 139
            +T  C Y      +  RRT   I  K F+ +    S   F +  IYF+ P+  HK Y
Sbjct: 3643 MTGECNYGGRVTDDWDRRTLRSILNKFFNPELVENSDYKFDSSGIYFVPPSGDHKSY 3699


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,103,531
Number of Sequences: 237096
Number of extensions: 1017020
Number of successful extensions: 1312
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)