Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O14
         (410 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P7Q7 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_A7ANG0 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_Q1VX61 Cluster: TrkA domain protein; n=1; Psychroflexus...    31   6.9  
UniRef50_Q4Y938 Cluster: DNA polymerase 1, putative; n=3; Plasmo...    31   9.1  
UniRef50_Q23A06 Cluster: MIR domain protein; n=1; Tetrahymena th...    31   9.1  

>UniRef50_Q4P7Q7 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 1049

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 12/43 (27%), Positives = 29/43 (67%)
 Frame = -3

Query: 363  MDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVILLV 235
            ++L++  FE++ +L   ++ S+++  R+++ D+L V K + LV
Sbjct: 954  LELKMSQFEELESLLEAERRSVEAGRRQLYADRLAVQKQLALV 996


>UniRef50_A7ANG0 Cluster: Putative uncharacterized protein; n=1;
            Babesia bovis|Rep: Putative uncharacterized protein -
            Babesia bovis
          Length = 1828

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 250  SNTFSLLIN*LYKASIQNYLNIMYCIKSIWDTRSSVIT 137
            +  F  L    YKA  + Y++I  C  ++W+  +SV+T
Sbjct: 1244 AKNFKSLAEGCYKALFEGYVHIFICHNNLWENHNSVVT 1281


>UniRef50_Q1VX61 Cluster: TrkA domain protein; n=1; Psychroflexus
           torquis ATCC 700755|Rep: TrkA domain protein -
           Psychroflexus torquis ATCC 700755
          Length = 598

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 243 VLLYTRIVYLGIFSVTCFALSAAGRDINSKFAQNN 347
           VLL   +VY+ IF +     S   +D+ SKF  NN
Sbjct: 184 VLLVVGVVYMSIFGIRLLPKSRRSKDLKSKFNVNN 218


>UniRef50_Q4Y938 Cluster: DNA polymerase 1, putative; n=3;
           Plasmodium chabaudi|Rep: DNA polymerase 1, putative -
           Plasmodium chabaudi
          Length = 1069

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = +3

Query: 144 TLLRVSQMDLIQYIIFR*FCILALYN*LINKLKVLLYTRIVYLGIFSVTCFALSAAGRD- 320
           ++  +++ D++ Y I R   ++ L+N LIN LK  +    +Y+ +     F +S   ++ 
Sbjct: 392 SIYEITEEDMMSYCISRNIFLIILFNYLINLLKNNMNILTLYIKVEQPLIFCISEIEKEG 451

Query: 321 --INSKFAQ--NNESQGPL 365
             +N K  Q   N S  PL
Sbjct: 452 IYLNQKKIQEIQNNSNDPL 470


>UniRef50_Q23A06 Cluster: MIR domain protein; n=1; Tetrahymena
            thermophila SB210|Rep: MIR domain protein - Tetrahymena
            thermophila SB210
          Length = 3377

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = -3

Query: 399  PTHTIRRYMSSVMDLEIHYFEQ----ISNLCHGQQHSMQSTLRRIFPDKL 262
            PT+ +        +  I+YFE+     SNLC+G+ +S+++ L + F DK+
Sbjct: 993  PTYLLLEKTPKQTEQLINYFEKQLILFSNLCYGRNYSIKNFLIKYFYDKI 1042


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,110,543
Number of Sequences: 1657284
Number of extensions: 6927311
Number of successful extensions: 12075
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12074
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)