Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O13
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.22 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.8  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    20   8.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   8.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   8.4  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -2

Query: 203 YSCDPTIRR-FHSVLPVQRVYQACHNNGLDHTARGQQGCILSGNHRKPFFLTNLSN 39
           Y C+ TI   FHSVLP++R + +      D+  +    C + G H   FFL    +
Sbjct: 155 YVCNTTIFLIFHSVLPIKRFFTSL-GIAFDNIMKNLI-CEIDGRHE--FFLAEFKS 206


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 174 SFSFTCPKGVSGL 136
           S++ TCP G SG+
Sbjct: 6   SYTCTCPLGFSGI 18


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 253 PPPPGSAASAHNS*RSLTPATQP 185
           PP P SAA+  +S    +PA  P
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAP 34


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 74  DYPKEYNPAVH 106
           +YPKE+N  +H
Sbjct: 98  NYPKEWNKILH 108


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 329 FYMINYGKMKHHRNYKYH*MSNSTI 403
           FY +N+       +Y +H ++N+T+
Sbjct: 434 FYKMNHPVYHKDPHYGFHNVTNTTL 458


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory
          receptor candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 67 SHFFSQIYQILS 32
          S+F S +YQIL+
Sbjct: 60 SYFISNVYQILA 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,846
Number of Sequences: 336
Number of extensions: 2511
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)