Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O13
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    27   0.21 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   1.9  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   1.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   5.9  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    22   7.8  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         22   7.8  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +2

Query: 140 PDTPFGQVKLNEIGGWLGRRSKTPSAV---MGACS 235
           P  P G   L +IG + GR SKTP +    +G CS
Sbjct: 8   PPRPLGSA-LKDIGAFFGRSSKTPRSPPSDLGECS 41


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 262 FVLPPPPGSAASAHNS*RSLTP-ATQPSADFIQFYLSKG 149
           + L PPPG   +A N   ++TP   +   D + F +  G
Sbjct: 491 YKLQPPPGGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNG 529


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 149 PFGQVKLNEIGGWLGRRSKTP 211
           P G   L +IG + GR SKTP
Sbjct: 42  PLGSA-LKDIGAFFGRSSKTP 61


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 207  VLLLRPNHPPISFSFTCPKGVS 142
            V LLR   PP+ F   CP  V+
Sbjct: 1467 VTLLRKISPPLGFGKLCPHRVA 1488


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 265 IFVLPPPPGSAASAHNS*RSL 203
           IF+L  PPGS  S H   R++
Sbjct: 385 IFILLGPPGSHGSFHEIGRAM 405


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 139 LAIITGWIIRPVDSRVVFFRVITESHFFSQIYQILSKIGDWLTKP 5
           L ++   I+  +DS +   R   +S   ++I  +  K+   L KP
Sbjct: 107 LELVKAEILTTIDSSLSSLRSAIKSDLLAEILALADKLTPVLAKP 151


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 98  AVHGPYDPARYYGKPDTPFGQV 163
           +VHGPY P    G  D+   Q+
Sbjct: 9   SVHGPYPPHMVPGGVDSDGAQI 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,844
Number of Sequences: 2352
Number of extensions: 11269
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)