Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O13
(417 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542155-1|CAG46952.1| 94|Homo sapiens ATP5J2 protein. 59 5e-09
CR456891-1|CAG33172.1| 94|Homo sapiens ATP5J2 protein. 59 5e-09
AY046911-1|AAL06647.1| 88|Homo sapiens F1Fo-ATP synthase compl... 59 5e-09
AF088918-1|AAC34895.1| 94|Homo sapiens F1F0-type ATPase subuni... 59 5e-09
AK223348-1|BAD97068.1| 94|Homo sapiens ATP synthase, H+ transp... 59 7e-09
BC003678-1|AAH03678.1| 94|Homo sapiens ATP synthase, H+ transp... 58 1e-08
AL834261-1|CAD38936.1| 377|Homo sapiens hypothetical protein pr... 30 3.6
BC142702-1|AAI42703.1| 355|Homo sapiens vacuolar protein sortin... 29 6.2
BC141827-1|AAI41828.1| 355|Homo sapiens vacuolar protein sortin... 29 6.2
BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembr... 29 8.2
AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens ... 29 8.2
>CR542155-1|CAG46952.1| 94|Homo sapiens ATP5J2 protein.
Length = 94
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +2
Query: 158 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 337
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 338 INYGKMKHHRNYKYH 382
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>CR456891-1|CAG33172.1| 94|Homo sapiens ATP5J2 protein.
Length = 94
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +2
Query: 158 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 337
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 338 INYGKMKHHRNYKYH 382
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AY046911-1|AAL06647.1| 88|Homo sapiens F1Fo-ATP synthase complex
Fo membrane domain f subunit protein.
Length = 88
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +2
Query: 158 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 337
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 14 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 73
Query: 338 INYGKMKHHRNYKYH 382
+Y +KH R KYH
Sbjct: 74 FSYKHLKHERLRKYH 88
>AF088918-1|AAC34895.1| 94|Homo sapiens F1F0-type ATPase subunit f
protein.
Length = 94
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +2
Query: 158 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 337
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 338 INYGKMKHHRNYKYH 382
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AK223348-1|BAD97068.1| 94|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit f
isoform 2a v protein.
Length = 94
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +2
Query: 158 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 337
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLGELPSWVLMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 338 INYGKMKHHRNYKYH 382
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>BC003678-1|AAH03678.1| 94|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F2
protein.
Length = 94
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/75 (34%), Positives = 42/75 (56%)
Frame = +2
Query: 158 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 337
+VKL E+ W+ R +PS + GA R ++R+ +KY+ KK ++ +L + F Y
Sbjct: 20 EVKLLELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 338 INYGKMKHHRNYKYH 382
+Y +KH R KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AL834261-1|CAD38936.1| 377|Homo sapiens hypothetical protein
protein.
Length = 377
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 62 MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEI-GGWLGRRSKTPSAVMGACSR 238
+A YP Y+P+ P P + P PF V G LG P+A +G
Sbjct: 220 LAMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--PTYPAAQLGPRGA 277
Query: 239 AWWRWQHKYVQPKKVG 286
A + W + P + G
Sbjct: 278 AGYSWSPQRSMPPRPG 293
>BC142702-1|AAI42703.1| 355|Homo sapiens vacuolar protein sorting
37 homolog C (S. cerevisiae) protein.
Length = 355
Score = 29.1 bits (62), Expect = 6.2
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 65 AFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEI-GGWLGRRSKTPSAVMGACSRA 241
A YP Y+P+ P P + P PF V G LG P+A +G A
Sbjct: 199 AMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--PTYPAAQLGPRGAA 256
Query: 242 WWRWQHKYVQPKKVG 286
+ W + P + G
Sbjct: 257 GYSWSPQRSMPPRPG 271
>BC141827-1|AAI41828.1| 355|Homo sapiens vacuolar protein sorting
37 homolog C (S. cerevisiae) protein.
Length = 355
Score = 29.1 bits (62), Expect = 6.2
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 65 AFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEI-GGWLGRRSKTPSAVMGACSRA 241
A YP Y+P+ P P + P PF V G LG P+A +G A
Sbjct: 199 AMPPYPLPYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLG--PTYPAAQLGPRGAA 256
Query: 242 WWRWQHKYVQPKKVG 286
+ W + P + G
Sbjct: 257 GYSWSPQRSMPPRPG 271
>BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembrane
protein 3 protein.
Length = 981
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 101 VHGPYDPARYYGKPDTPFGQVKLNEIGGWLGRRSKTPSA 217
+ GP DP + ++P G ++ +E W GR P A
Sbjct: 368 IPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPA 406
>AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens
cDNA FLJ33674 fis, clone BRAWH2002047. ).
Length = 667
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 101 VHGPYDPARYYGKPDTPFGQVKLNEIGGWLGRRSKTPSA 217
+ GP DP + ++P G ++ +E W GR P A
Sbjct: 368 IPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPA 406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,309,671
Number of Sequences: 237096
Number of extensions: 1650678
Number of successful extensions: 4013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4013
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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