Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O13
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-4|CAA91350.1| 153|Caenorhabditis elegans Hypothetical pr... 67 6e-12
Z99280-2|CAE18017.1| 129|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81492-2|CAB04027.1| 458|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC024748-2|AAF60412.1| 236|Caenorhabditis elegans Hypothetical ... 27 4.1
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 27 7.2
Z81088-8|CAB03130.2| 332|Caenorhabditis elegans Hypothetical pr... 26 9.5
U80451-12|AAB37846.1| 206|Caenorhabditis elegans Glutathione s-... 26 9.5
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 26 9.5
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 26 9.5
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 26 9.5
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 26 9.5
>Z66515-4|CAA91350.1| 153|Caenorhabditis elegans Hypothetical
protein R53.4 protein.
Length = 153
Score = 66.9 bits (156), Expect = 6e-12
Identities = 32/69 (46%), Positives = 38/69 (55%)
Frame = +2
Query: 59 KMAFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLNEIGGWLGRRSKTPSAVMGACSR 238
K G + K +N VHGPY RYYGK DT F VKL ++ W+ RR KTPSA R
Sbjct: 43 KTEVGLFDKRWNKNVHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMR 102
Query: 239 AWWRWQHKY 265
WR + Y
Sbjct: 103 NIWRVHNLY 111
>Z99280-2|CAE18017.1| 129|Caenorhabditis elegans Hypothetical
protein Y57G11B.6 protein.
Length = 129
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 292 SHAYFFRLNIFVLPPPPGSAASAHNS*RSLTPATQPSA 179
+H Y + F P P S A HNS S P +PSA
Sbjct: 71 NHGYSAHVTGFEAHPSPPSTAQHHNSTMSSLPPRRPSA 108
>Z81492-2|CAB04027.1| 458|Caenorhabditis elegans Hypothetical
protein E03H4.5 protein.
Length = 458
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 158 VQRVYQACHNNGLDHTARGQQGCILSGNHRKPFFLTNLSNTIEN 27
V++++ NN L+H A Q+ + N PFF +L N + N
Sbjct: 377 VEKLFTYFPNNTLEHVASMQKTAMTIFNGSLPFFSLDLINGVNN 420
>AC024748-2|AAF60412.1| 236|Caenorhabditis elegans Hypothetical
protein Y110A2AR.3a protein.
Length = 236
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 259 VLPPPPGSAASAHNS*RSLTPATQPSA 179
+LPPPPG+ + NS S T T S+
Sbjct: 182 LLPPPPGAGSMIRNSRPSTTTTTASSS 208
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 82 RVITESHFFSQIYQILSKIGDWLTKP 5
R I E FF+ ++ +LSK W+T P
Sbjct: 785 RHIFEKIFFAALFAVLSKEFGWITSP 810
>Z81088-8|CAB03130.2| 332|Caenorhabditis elegans Hypothetical
protein F53F1.8 protein.
Length = 332
Score = 26.2 bits (55), Expect = 9.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 289 GSILPTACWQHDFLLYDQLW 348
G ++P W FL+Y+Q W
Sbjct: 74 GQVIPARRWFEPFLIYNQSW 93
>U80451-12|AAB37846.1| 206|Caenorhabditis elegans Glutathione
s-transferase protein 7 protein.
Length = 206
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 137 KPDTPFGQVKLNEIGG 184
KP TPFGQ+ L E+ G
Sbjct: 43 KPSTPFGQLPLLEVDG 58
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 269 EHICVATSTRLGCKRP*QLKESYSCDPT 186
EH C A S GC++ + + CDPT
Sbjct: 673 EHNCPAGSYGDGCQQVCSCADGHGCDPT 700
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 269 EHICVATSTRLGCKRP*QLKESYSCDPT 186
EH C A S GC++ + + CDPT
Sbjct: 673 EHNCPAGSYGDGCQQVCSCADGHGCDPT 700
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 269 EHICVATSTRLGCKRP*QLKESYSCDPT 186
EH C A S GC++ + + CDPT
Sbjct: 673 EHNCPAGSYGDGCQQVCSCADGHGCDPT 700
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 269 EHICVATSTRLGCKRP*QLKESYSCDPT 186
EH C A S GC++ + + CDPT
Sbjct: 673 EHNCPAGSYGDGCQQVCSCADGHGCDPT 700
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,361,778
Number of Sequences: 27780
Number of extensions: 234504
Number of successful extensions: 637
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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