Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O11
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.59 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   5.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.59
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 25  CLYCNHFDCNLFAYCLCIGLLEN*NY*ISLFCYC 126
           C  C+  +  +F + + IG L   N  +  FCYC
Sbjct: 524 CDVCDSVN-RIFGFIIIIGCLIQFNTIVFAFCYC 556



 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 55  LFAYCLCIGLLEN*NY*ISLFCYC 126
           LF + + IG L   N  +  FCYC
Sbjct: 252 LFGFPIIIGCLIQFNTIVFSFCYC 275


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 46  DCNLFAYCL 72
           DC++F YCL
Sbjct: 433 DCSIFYYCL 441


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 89  SSNPIHRQYANKLQSKW 39
           SS   H Q+ N L++ W
Sbjct: 267 SSTMSHSQFGNGLETSW 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,203
Number of Sequences: 336
Number of extensions: 2012
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)