Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_O11
         (460 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   4.8  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   6.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.5  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 202 NEYSTPANDPKN 237
           N  ST +NDPKN
Sbjct: 102 NRSSTSSNDPKN 113


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 55 LFAYCLCIGLL 87
          +F +C+C+G L
Sbjct: 7  IFGFCVCVGAL 17


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 166 EQPTDTVAIPTENEYSTPANDP 231
           E+PT+T +   E+E  TP  DP
Sbjct: 425 EEPTNTASGSNEDEDETPL-DP 445


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 301 YFEIYLAYFVEVTAHIGSPPAYSL 230
           YF I   + +E+   I  PPA  L
Sbjct: 29  YFRISRRHLLELAEKIPGPPALPL 52


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 235 NMQEVTQYVQSLLQSMQDK 291
           N Q+ TQY+     ++Q+K
Sbjct: 391 NTQQFTQYIPESSSNLQEK 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,918
Number of Sequences: 438
Number of extensions: 2606
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)