Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O10
(446 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 228 1e-60
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 228 1e-60
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 3e-60
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 227 3e-60
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 227 3e-60
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 227 3e-60
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 7e-60
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 225 2e-59
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 225 2e-59
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 225 2e-59
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 3e-58
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 1e-57
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 3e-57
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 1e-56
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 204 3e-53
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 145 1e-35
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 100 5e-22
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 99 1e-21
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 99 1e-21
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 91 4e-19
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 84 6e-17
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 83 1e-16
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 67 7e-12
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_43848| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007
SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026) 31 0.33
SB_43849| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 27 5.3
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 27 5.3
SB_5822| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_45073| Best HMM Match : ERM (HMM E-Value=0) 27 5.3
SB_32349| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.00025) 27 5.3
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_26081| Best HMM Match : Ribosomal_S8 (HMM E-Value=3.8) 27 7.1
SB_50716| Best HMM Match : WD40 (HMM E-Value=0) 27 9.3
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_55276| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 27 9.3
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 228 bits (558), Expect = 1e-60
Identities = 105/106 (99%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 224 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 284 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 329
Score = 226 bits (552), Expect = 7e-60
Identities = 103/106 (97%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 657 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 716
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 717 EQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 762
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 314 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 747 ACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 793
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 228 bits (558), Expect = 1e-60
Identities = 105/106 (99%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 22 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 81
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 82 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 127
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 112 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 158
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 227 bits (555), Expect = 3e-60
Identities = 104/106 (98%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 161 YTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 220
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 221 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 266
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 251 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 297
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 227 bits (555), Expect = 3e-60
Identities = 104/106 (98%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 288 YTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 347
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 348 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 393
Score = 227 bits (555), Expect = 3e-60
Identities = 104/106 (98%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 809 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 868
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 869 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 914
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 378 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 899 ACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 945
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 227 bits (555), Expect = 3e-60
Identities = 104/106 (98%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 149 YTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 208
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 209 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 254
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 239 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 285
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 227 bits (555), Expect = 3e-60
Identities = 104/106 (98%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 224 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 284 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
Score = 53.6 bits (123), Expect = 7e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 314 ACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 226 bits (552), Expect = 7e-60
Identities = 103/106 (97%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 224 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 284 EQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 314 ACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 225 bits (549), Expect = 2e-59
Identities = 102/106 (96%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 22 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 81
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VA+ITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 82 EQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 127
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 112 ACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQP 158
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 225 bits (549), Expect = 2e-59
Identities = 102/106 (96%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 223 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 282
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VA+ITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 283 EQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 328
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGI ++ P
Sbjct: 313 ACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAP 359
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 225 bits (549), Expect = 2e-59
Identities = 102/106 (96%), Positives = 105/106 (99%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 149 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 208
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VAEITN+CFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 209 EQLTVAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 254
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/47 (51%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ RP RT QF DWCPTGFKVGIN Q P
Sbjct: 239 ACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPP 285
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 221 bits (539), Expect = 3e-58
Identities = 100/106 (94%), Positives = 104/106 (98%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 209 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 268
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VAEIT +CFEPANQMVKCDPRHGKYMACC+L+RGDVVPKDVN
Sbjct: 269 EQLTVAEITTSCFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVN 314
Score = 182 bits (443), Expect = 1e-46
Identities = 80/106 (75%), Positives = 94/106 (88%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLI ++ ++LR+ LNVDL EFQTNLVPYPRIHFP+ TYAP+ISAEKAYH
Sbjct: 642 YTNLNRLIDCVLHHCLSTLRW--ILNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYH 699
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E ++V+++TNACFEPANQMVKCDPRHGKYMACC+L+RGDVVPKDVN
Sbjct: 700 EMMTVSDLTNACFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVN 745
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 299 ACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 345
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 730 ACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 776
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 219 bits (534), Expect = 1e-57
Identities = 96/106 (90%), Positives = 104/106 (98%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFP+ TYAP+ISAEKAYH
Sbjct: 189 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYH 248
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E ++V+++TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 249 EMMTVSDLTNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 294
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 279 ACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 325
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 217 bits (531), Expect = 3e-57
Identities = 96/106 (90%), Positives = 104/106 (98%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLI Q+VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFP+ +YAPV+SAEKAYH
Sbjct: 595 YTNLNRLISQLVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYH 654
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VA+ITN+CFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 655 EQLTVADITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 700
Score = 163 bits (397), Expect = 4e-41
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 1028 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 1087
Query: 213 EQLSVAEITNACFEPANQM 269
EQL+VAEITNACFEPANQM
Sbjct: 1088 EQLTVAEITNACFEPANQM 1106
Score = 53.2 bits (122), Expect = 9e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RTIQFVDWCPTGFKVGINYQ P
Sbjct: 1119 RTIQFVDWCPTGFKVGINYQPP 1140
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + +TIQFVDWCPTGFKVGINYQ P
Sbjct: 685 ACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPP 731
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 215 bits (526), Expect = 1e-56
Identities = 96/106 (90%), Positives = 103/106 (97%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSS+TASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVI A+KAYH
Sbjct: 355 YTNLNRLIGQIVSSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYH 414
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E +SVAEIT+ACFEP+NQMVKCDPR+GKYMACC+LYRGDVVPKDVN
Sbjct: 415 ENMSVAEITSACFEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVN 460
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFK 420
ACC P+ + RTIQFVDWCPTGFK
Sbjct: 445 ACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFK 483
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 204 bits (497), Expect = 3e-53
Identities = 92/100 (92%), Positives = 96/100 (96%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y NLNRLIGQIVSSIT+SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS EKAYH
Sbjct: 1135 YANLNRLIGQIVSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYH 1194
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 332
EQL+VA+ITN CF+P NQMVKCDPRHGKYMACCMLYRGDV
Sbjct: 1195 EQLTVAQITNMCFDPNNQMVKCDPRHGKYMACCMLYRGDV 1234
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 145 bits (352), Expect = 1e-35
Identities = 75/106 (70%), Positives = 82/106 (77%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSS+TASLRFDG+LNVDL EFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 214 YTNLNRLIGQIVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYH 273
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQL+VAEITN ++ ++A C GDVV KDVN
Sbjct: 274 EQLTVAEITNGILSNVIRVTA-----STWLAVC-YSEGDVVLKDVN 313
Score = 66.5 bits (155), Expect = 9e-12
Identities = 31/57 (54%), Positives = 35/57 (61%)
Frame = +1
Query: 274 NVTRVTANTWPAACCTAVTSCPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
NV RVTA+TW A C + + + RTIQFVDWCPTGFKVGINYQ P
Sbjct: 288 NVIRVTASTWLAVCYSEGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 344
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 100 bits (240), Expect = 5e-22
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = +3
Query: 27 TRYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKA 206
T Y++LN +I +S +T LRF G LN DL + N++PYPR+HF + +AP+ S E
Sbjct: 125 TTYSDLNHIISNTMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECV 184
Query: 207 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 347
+ L+VA++T A F+ N ++ C+P+ GKY+ +YRG + K+V
Sbjct: 185 SYRALTVADLTQAIFDNKNLLIACNPKRGKYLTYAAMYRGLMSMKEV 231
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 99.1 bits (236), Expect = 1e-21
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 222 YGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 282 RALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 327
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 99.1 bits (236), Expect = 1e-21
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 222 YGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 282 RALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 327
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 91.1 bits (216), Expect = 4e-19
Identities = 39/106 (36%), Positives = 62/106 (58%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+ F + +AP+ S +
Sbjct: 167 YGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQY 226
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+V E+T F+ N M CDP HG+Y+ ++RG + K+++
Sbjct: 227 RALTVPELTQQMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELD 272
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 83.8 bits (198), Expect = 6e-17
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 152
YTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 99 YTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 83.0 bits (196), Expect = 1e-16
Identities = 33/110 (30%), Positives = 64/110 (58%)
Frame = +3
Query: 18 GIGTRYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 197
G + +N ++ ++ ++T+S RF+G+LNVDL E NLVP+P++H+ + + P+ +
Sbjct: 266 GADKPFDAMNNIVANLILNMTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYAL 325
Query: 198 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 347
+ ++ F +Q++K DP+H Y+AC ++ RG+V D+
Sbjct: 326 TDVKLPPRRLDQMFTDAFSKDHQLIKADPKHNLYLACALILRGNVEVSDI 375
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 66.9 bits (156), Expect = 7e-12
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +3
Query: 138 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 317
+VP+PR+HF + +AP+ S ++ +SV E+T F+ N M CDPRHG+Y+ +
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 318 YRG 326
+RG
Sbjct: 61 FRG 63
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/64 (31%), Positives = 40/64 (62%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
++ +N+L+ I+++ T +LR+ G +N DL +L+P PR+HF + Y P+ + +K +
Sbjct: 261 FSQVNQLVSTIMATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQKPKN 320
Query: 213 EQLS 224
+S
Sbjct: 321 VMVS 324
>SB_43848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 37.1 bits (82), Expect = 0.007
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = +2
Query: 11 GCRNRHEVHQPQSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSSH 190
G + H V P S P II Y S + R S+G+P LP +PT H R SH
Sbjct: 278 GLSSHHRVVFPSSGCLP--IIGYHTS-YHRVSHFPSSGIP-----LPIIGYPTSHHRVSH 329
Query: 191 LCREGLPRAALCSGDHERL 247
G+P + H R+
Sbjct: 330 FLSSGIPLPIIGLSSHHRV 348
>SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)
Length = 1532
Score = 31.5 bits (68), Expect = 0.33
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 86 SAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSSHLCREGLPRAALCSG 232
S F+RR S G+ T P+ T H+R S + R+ +P AL G
Sbjct: 767 STFKRRTTAPSMGLVSDWSIPATSPYNTEHIRRSGMDRKNVPFNALIVG 815
>SB_43849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 30.7 bits (66), Expect = 0.57
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = +2
Query: 26 HEVHQPQSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSSHLCREG 205
H V SS P II LS+ R S+G+P LP +PT H R SH G
Sbjct: 281 HRVSHFPSSGIPLPIIG--LSSHHRVSHFPSSGIP-----LPIIGYPTSHHRVSHFLSSG 333
Query: 206 LPRAALCSGDHERL 247
+P + + R+
Sbjct: 334 IPLPIIGLSSYHRV 347
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 140 GALPTYPFPTGHVRSSHLCREGLPRAALCSGDHERL 247
G LP +PT + R SH G+P + H R+
Sbjct: 416 GCLPIIGYPTSYHRVSHFPSSGIPLPIIGLSSHHRV 451
Score = 27.5 bits (58), Expect = 5.3
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 GCRNRHEV-HQPQSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSS 187
G + H V H P S II Y S R S+G+P LP +PT + R S
Sbjct: 234 GLSSHHRVSHFPSSGCL--LIIGYPTS--HHRVVFLSSGIP-----LPIIGYPTSYHRVS 284
Query: 188 HLCREGLPRAALCSGDHERL 247
H G+P + H R+
Sbjct: 285 HFPSSGIPLPIIGLSSHHRV 304
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 140 GALPTYPFPTGHVRSSHLCREG-LPRAALCS 229
G LP +PT H R SH G LP L S
Sbjct: 541 GCLPVIGYPTSHHRVSHFLSSGCLPIIGLSS 571
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +2
Query: 140 GALPTYPFPTGHVRSSHLCREGLPRAALCSG--DHERLLRARQPDGEM*PASRQIHGLL 310
G LP+ P+G + S L LP L SG RL R P G + P+ R G L
Sbjct: 223 GRLPSRRLPSGRLPSGRLPSRWLPSRRLPSGCLPSRRLPSGRLPSGRL-PSRRLPSGRL 280
Score = 27.1 bits (57), Expect = 7.1
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 59 PDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSSHLCREGLPRAALCSG-- 232
P R + R RR P S +P + G LP+ P+G + S L LP L S
Sbjct: 164 PSRRLPSRRLPSRRLP---SGCLPSRRGQLPSRRLPSGRLPSRRLPSGWLPSRRLPSRRL 220
Query: 233 DHERLLRARQPDGEM*PASR 292
RL R P G + P+ R
Sbjct: 221 PSGRLPSRRLPSGRL-PSGR 239
Score = 27.1 bits (57), Expect = 7.1
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +2
Query: 47 SSYRPDRIIDYRLSAFRRRPQCR--SNGVPDQL---GALPTYPFPTGHVRSSHLCREGLP 211
S + P R + RR P R S +P + G LP+ P+G + S L LP
Sbjct: 242 SRWLPSRRLPSGCLPSRRLPSGRLPSGRLPSRRLPSGRLPSRRLPSGRLPSRRLPSGRLP 301
Query: 212 RAALCSGDHERLLRARQPDGEM*PASRQIHGLL 310
L SG RL R P G + P+ R G L
Sbjct: 302 SGRLPSG---RLPSRRLPSGRL-PSGRLPSGRL 330
Score = 27.1 bits (57), Expect = 7.1
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 95 RRRPQCRSNGVPDQLGALPTYPFPTGHVRSSHLCREGLPRAALCSG--DHERLLRARQPD 268
RR P R G LP+ P+G + S L LP L SG RL R P
Sbjct: 313 RRLPSGRLPSGRLPSGRLPSRRLPSGQLPSGRLPSGRLPSGRLPSGWLPSRRLPSRRLPS 372
Query: 269 GEM*PASRQIHGLL 310
G + P+ R G L
Sbjct: 373 GRL-PSRRLPSGRL 385
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 140 GALPTYPFPTGHVRSSHLCREGLPRAALCSGDHERLLRARQPDGEM*PASR 292
G LP+ P+G + S L LP L SG RL R P G + P+ R
Sbjct: 21 GRLPSRRLPSGRLPSGRLPSRRLPSRRLPSG---RLPSRRLPSGRL-PSGR 67
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 26 HEVHQPQSSYRPDRIIDYRLSAFRRRPQCRSNGV---PDQLGALPTYPFPTGHVRSSHLC 196
HE+ + S+ DRII A P + PD++ L + F R++HL
Sbjct: 12 HEILKDPSTAAADRIIAINEDA-DESPDLFEGDIELTPDEVSLLSSQTFDDVTKRNAHLH 70
Query: 197 REGLPRA 217
R+GL RA
Sbjct: 71 RQGLWRA 77
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 27.5 bits (58), Expect = 5.3
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 17 RNRHEVHQPQSSYRPDRIIDYRL 85
++R+EV+ + ++ D IIDYR+
Sbjct: 2255 KDRYEVNMDEEDFKRDNIIDYRI 2277
>SB_5822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 139 KLVWNSVRSTLRAPSKRREAVIDDTIWPIRRLRLVYLV 26
K W + S+ R S+R E + IW ++ R+ Y V
Sbjct: 307 KTRWRNHASSFRIESRRNETELSKHIWQLKDRRINYTV 344
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +2
Query: 17 RNRHEVHQPQSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSS 187
+ +++ +PQ+ ++ ++ R + R +PD A PT+P P G S
Sbjct: 698 QQQYQASRPQAQHKQQQVPQSRDYSDAPPQAARPKPIPDAGPASPTHPVPLGRTGES 754
>SB_45073| Best HMM Match : ERM (HMM E-Value=0)
Length = 504
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 259 ALCMGNHELYMRRRKPD 275
>SB_32349| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.00025)
Length = 420
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 86 SAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSSHLCREGLPR 214
S++ C+ N V G+ P P P GH+RS LC GL R
Sbjct: 375 SSWDSSASCKGNIVV-HTGSSP--PEPIGHIRSDCLCMMGLYR 414
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 4 IPRLQESARGTPT---SIVLSARSYHRLPPLCVSTAPSMSI*RSSRPTW 141
IP LQE+ + + + +SY R P L ++ I R S PTW
Sbjct: 2432 IPALQEAMKALESLNKKDMTEIKSYGRPPALVEKVMEAVMILRQSEPTW 2480
>SB_26081| Best HMM Match : Ribosomal_S8 (HMM E-Value=3.8)
Length = 426
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 14 CRNRHEVHQPQSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHVRSSHL 193
C NR HQ Q + +++ + R P+ R+ + Q + P PTG++ S H
Sbjct: 286 CTNRVSQHQTQMYQQGYLNTEHKCT--NRVPKQRTQ-MYQQGTSTPNTNVPTGYLNSEHK 342
Query: 194 CREGLPR 214
C +P+
Sbjct: 343 CTNRVPQ 349
>SB_50716| Best HMM Match : WD40 (HMM E-Value=0)
Length = 494
Score = 26.6 bits (56), Expect = 9.3
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = -1
Query: 395 TNWMVRXGLDGSDSRVDVLGHDVTAVQHAAGH----VFAVTRVTFHHLVGGLEASVRDLR 228
T+ +R L G + V+V+ D + A+G V++ + F + G + L+
Sbjct: 301 TDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHRRGIACLQ 360
Query: 227 YRELLVVSLLGRDDWSVRDQWEMD 156
YR+ LVVS G D ++R W+++
Sbjct: 361 YRDRLVVS--GSSDNTIR-LWDIE 381
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 106 RAPSKRREAVIDDTIWPIRRLRLVYLVPIPAAGGS 2
RAP RE +DT +P +R R++ +V +PA S
Sbjct: 2622 RAPGTARE---NDTAFPAKRCRVLIVVLLPAKSDS 2653
>SB_55276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 11 GCRNRHEVHQPQSSYRPDRIIDYR 82
G R R E+ + QSSYRP ++ R
Sbjct: 269 GSRERSELREGQSSYRPSHRLEER 292
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/52 (23%), Positives = 20/52 (38%)
Frame = +1
Query: 274 NVTRVTANTWPAACCTAVTSCPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGI 429
NV + T+ T+ +T L P + + FV+W P K +
Sbjct: 121 NVLKRETPTYSELNSLIATTMSGVTTSLRFPGQDSHSSSFVEWIPNNMKTAV 172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,712
Number of Sequences: 59808
Number of extensions: 314793
Number of successful extensions: 988
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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