Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_O10
(446 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 214 2e-56
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 214 2e-56
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 214 2e-56
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 214 2e-56
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 211 2e-55
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 208 1e-54
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 206 4e-54
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 206 4e-54
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 204 2e-53
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 204 2e-53
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 203 5e-53
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 203 5e-53
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 195 1e-50
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 195 1e-50
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 193 6e-50
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 182 1e-46
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 103 6e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 103 6e-23
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 99 7e-22
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 97 5e-21
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 97 5e-21
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 97 5e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 57 7e-09
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 57 7e-09
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 49 2e-06
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 49 2e-06
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 30 0.67
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 27 4.7
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 27 4.7
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 27 4.7
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 27 4.7
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 27 4.7
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 27 4.7
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 27 4.7
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 27 4.7
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 27 4.7
AF016448-3|AAB65958.1| 217|Caenorhabditis elegans Hypothetical ... 27 6.2
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 27 8.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 214 bits (523), Expect = 2e-56
Identities = 98/106 (92%), Positives = 102/106 (96%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL T++PVISAEKAYH
Sbjct: 224 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVN
Sbjct: 284 EQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 329
Score = 51.6 bits (118), Expect = 3e-07
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R+IQFVDWCPTGFKVGINYQ P
Sbjct: 339 RSIQFVDWCPTGFKVGINYQPP 360
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 214 bits (523), Expect = 2e-56
Identities = 98/106 (92%), Positives = 102/106 (96%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL T++PVISAEKAYH
Sbjct: 223 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYH 282
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVN
Sbjct: 283 EQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 328
Score = 51.6 bits (118), Expect = 3e-07
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R+IQFVDWCPTGFKVGINYQ P
Sbjct: 338 RSIQFVDWCPTGFKVGINYQPP 359
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 214 bits (523), Expect = 2e-56
Identities = 98/106 (92%), Positives = 102/106 (96%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL T++PVISAEKAYH
Sbjct: 224 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVN
Sbjct: 284 EQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 329
Score = 51.6 bits (118), Expect = 3e-07
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R+IQFVDWCPTGFKVGINYQ P
Sbjct: 339 RSIQFVDWCPTGFKVGINYQPP 360
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 214 bits (523), Expect = 2e-56
Identities = 98/106 (92%), Positives = 102/106 (96%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL T++PVISAEKAYH
Sbjct: 224 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSVAEITN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVN
Sbjct: 284 EQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 329
Score = 51.6 bits (118), Expect = 3e-07
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R+IQFVDWCPTGFKVGINYQ P
Sbjct: 339 RSIQFVDWCPTGFKVGINYQPP 360
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 211 bits (516), Expect = 2e-55
Identities = 93/106 (87%), Positives = 103/106 (97%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YT+LNRL+ Q+VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP+ISAEKAYH
Sbjct: 224 YTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYH 283
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQLSV+EITN CFEP +QMVKCDPR+GKYMACC+LYRGDVVPK++N
Sbjct: 284 EQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEIN 329
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + R IQFVDWCPTGFKVGINYQ P
Sbjct: 314 ACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPP 360
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 208 bits (509), Expect = 1e-54
Identities = 92/106 (86%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRLI Q++SS+TASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYH
Sbjct: 229 YTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYH 288
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQ++VAEIT CFEP QMVKCDPR GKYMACC+LYRGDVVPKDVN
Sbjct: 289 EQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVN 334
Score = 52.4 bits (120), Expect = 1e-07
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 ACCTAVTS--CPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINYQTP 444
ACC P+ + R+IQFVDWCPTGFKVGINYQ P
Sbjct: 319 ACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPP 365
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 206 bits (504), Expect = 4e-54
Identities = 92/106 (86%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL Y P+ISAEKAYH
Sbjct: 222 YTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYH 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV++ITN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN
Sbjct: 282 EALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Score = 53.2 bits (122), Expect = 8e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RTIQFVDWCPTGFKVGINYQ P
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPP 358
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 206 bits (504), Expect = 4e-54
Identities = 92/106 (86%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL Y P+ISAEKAYH
Sbjct: 222 YTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYH 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV++ITN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN
Sbjct: 282 EALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Score = 53.2 bits (122), Expect = 8e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RTIQFVDWCPTGFKVGINYQ P
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPP 358
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 204 bits (498), Expect = 2e-53
Identities = 91/106 (85%), Positives = 98/106 (92%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL Y P+ISA+KAYH
Sbjct: 222 YTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYH 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV +ITN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN
Sbjct: 282 EALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Score = 53.2 bits (122), Expect = 8e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RTIQFVDWCPTGFKVGINYQ P
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPP 358
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 204 bits (498), Expect = 2e-53
Identities = 91/106 (85%), Positives = 98/106 (92%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL Y P+ISA+KAYH
Sbjct: 222 YTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYH 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV +ITN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN
Sbjct: 282 EALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Score = 53.2 bits (122), Expect = 8e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RTIQFVDWCPTGFKVGINYQ P
Sbjct: 337 RTIQFVDWCPTGFKVGINYQPP 358
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 203 bits (495), Expect = 5e-53
Identities = 91/106 (85%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL +Y P+ISAEKAYH
Sbjct: 222 YTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYH 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV +ITN+CFEPANQMVKCDPR+GKYMA C+LYRGDVVPKDVN
Sbjct: 282 EALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVN 327
Score = 51.2 bits (117), Expect = 3e-07
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R++QFVDWCPTGFKVGINYQ P
Sbjct: 337 RSVQFVDWCPTGFKVGINYQPP 358
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 203 bits (495), Expect = 5e-53
Identities = 91/106 (85%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL +Y P+ISAEKAYH
Sbjct: 222 YTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYH 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV +ITN+CFEPANQMVKCDPR+GKYMA C+LYRGDVVPKDVN
Sbjct: 282 EALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVN 327
Score = 51.2 bits (117), Expect = 3e-07
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R++QFVDWCPTGFKVGINYQ P
Sbjct: 337 RSVQFVDWCPTGFKVGINYQPP 358
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 195 bits (476), Expect = 1e-50
Identities = 86/106 (81%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRL+ QI+SSITASLRF+GALNVDLTEFQTNLVPYPRIHFPLVTYAP++SAE+A H
Sbjct: 230 YTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASH 289
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQ +V+++T+ACFEP QMVKCDPR GKYMA C+LYRGDVVPKD+N
Sbjct: 290 EQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDIN 335
Score = 51.2 bits (117), Expect = 3e-07
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RT+QFV+WCPTGFKVGINYQ P
Sbjct: 345 RTVQFVEWCPTGFKVGINYQPP 366
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 195 bits (476), Expect = 1e-50
Identities = 86/106 (81%), Positives = 99/106 (93%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
YTNLNRL+ QI+SSITASLRF+GALNVDLTEFQTNLVPYPRIHFPLVTYAP++SAE+A H
Sbjct: 202 YTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASH 261
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
EQ +V+++T+ACFEP QMVKCDPR GKYMA C+LYRGDVVPKD+N
Sbjct: 262 EQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDIN 307
Score = 51.2 bits (117), Expect = 3e-07
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
RT+QFV+WCPTGFKVGINYQ P
Sbjct: 317 RTVQFVEWCPTGFKVGINYQPP 338
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 193 bits (470), Expect = 6e-50
Identities = 88/106 (83%), Positives = 96/106 (90%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y+NLNRLI Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPL TYAPVISA++A+H
Sbjct: 227 YSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHH 286
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV +IT+ CFE ANQMVKCDP GKYMA C+LYRGDVVPKDVN
Sbjct: 287 EPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVN 332
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R I FVDWCPTGFKVGINYQ P
Sbjct: 342 RGINFVDWCPTGFKVGINYQAP 363
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 182 bits (443), Expect = 1e-46
Identities = 84/106 (79%), Positives = 94/106 (88%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y NLNR+I Q+VSSITASLRFDGALNVDL EFQTNLVPYPRIHFPLV Y P+IS+ A+H
Sbjct: 221 YNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISS--AHH 278
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
E LSV EIT +CFE +NQMVKCDP+HGKYMA C+LYRGDVVPKDV+
Sbjct: 279 EFLSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVS 324
Score = 50.4 bits (115), Expect = 6e-07
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 379 RTIQFVDWCPTGFKVGINYQTP 444
R++QFVDWCPTGFKVG+NYQ P
Sbjct: 334 RSVQFVDWCPTGFKVGLNYQPP 355
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 103 bits (247), Expect = 6e-23
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 222 YGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
++V E+T CF+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 282 RAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVD 327
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 103 bits (247), Expect = 6e-23
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 222 YGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
++V E+T CF+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 282 RAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVD 327
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 99 bits (238), Expect = 7e-22
Identities = 42/106 (39%), Positives = 64/106 (60%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S +
Sbjct: 222 YGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+V E+T F+ N M CDPRHG+Y+ ++RG + K+V+
Sbjct: 282 RSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 327
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 97.1 bits (231), Expect = 5e-21
Identities = 41/106 (38%), Positives = 65/106 (61%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ + +
Sbjct: 222 YGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+VAE+T F+ N M CDPRHG+Y+ ++RG + ++V+
Sbjct: 282 RALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVD 327
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 97.1 bits (231), Expect = 5e-21
Identities = 41/106 (38%), Positives = 65/106 (61%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ + +
Sbjct: 222 YGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+VAE+T F+ N M CDPRHG+Y+ ++RG + ++V+
Sbjct: 282 RALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVD 327
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 97.1 bits (231), Expect = 5e-21
Identities = 41/106 (38%), Positives = 65/106 (61%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ + +
Sbjct: 222 YGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAY 281
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 350
L+VAE+T F+ N M CDPRHG+Y+ ++RG + ++V+
Sbjct: 282 RALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVD 327
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L +S IT RF G L D+ + T PR+HF + ++APV
Sbjct: 223 YGDLNHLASLALSGITTFQRFKGNLKTDIRKLNT--AGSPRLHFFMTSFAPVYGKGIIDC 280
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 341
+ S++++T + N M C+ GK+++ ++YRG K
Sbjct: 281 QAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEK 322
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
Y +LN L +S IT RF G L D+ + T PR+HF + ++APV
Sbjct: 223 YGDLNHLASLALSGITTFQRFKGNLKTDIRKLNT--AGSPRLHFFMTSFAPVYGKGIIDC 280
Query: 213 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 341
+ S++++T + N M C+ GK+++ ++YRG K
Sbjct: 281 QAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEK 322
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
+ ++N L+ +I+S+ TA RF+ A+ + +L P+P +HF +PV+ + +
Sbjct: 227 FDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFT 284
Query: 213 EQLSVAEITNACFEPANQMVKCDPR 287
+ SVA++T +P + MV R
Sbjct: 285 RKTSVADVTRFLLKPTSMMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +3
Query: 33 YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 212
+ ++N L+ +I+S+ TA RF+ A+ + +L P+P +HF +PV+ + +
Sbjct: 227 FDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFT 284
Query: 213 EQLSVAEITNACFEPANQMVKCDPR 287
+ SVA++T +P + MV R
Sbjct: 285 RKTSVADVTRFLLKPTSMMVSTASR 309
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 30.3 bits (65), Expect = 0.67
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 319 TAVTSCPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINY 435
TA T+CP+ + +DWCP +VG+NY
Sbjct: 319 TACTTCPKV---YDTACQGFGIPSLIDWCPQAAEVGVNY 354
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 284 ALCMGNHELYMRRRKPD 300
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 284 ALCMGNHELYMRRRKPD 300
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 284 ALCMGNHELYMRRRKPD 300
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AF016448-3|AAB65958.1| 217|Caenorhabditis elegans Hypothetical
protein F41E6.8 protein.
Length = 217
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 304 PAACCTAVTSCPRTSTRLSLPSRPXRTIQFVDWCPTGFKVGINY 435
P + T CP+T + + ++WCPT +VG+ Y
Sbjct: 21 PTQQVDSCTVCPKT---YDMNCQGFGIPNLINWCPTAAEVGVTY 61
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 286 VTANTWPAACCTAVTSCPRTSTRLSLPSRPXRTIQFV--DWCPTGFK 420
V ++T + CC AVT+CP ++P + D CP F+
Sbjct: 561 VKSSTNQSICCKAVTACPDNRIPYNIPGTNSVVACSIERDDCPDDFQ 607
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,724,607
Number of Sequences: 27780
Number of extensions: 220788
Number of successful extensions: 739
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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